Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0423
         (623 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    24   4.5  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   6.0  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   6.0  

>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 41  STLASMTELVYQAGCSAPPVVA 106
           ST   +T + YQ G +APP+ A
Sbjct: 295 STHGLVTTVAYQMGRNAPPIYA 316


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 113 TSSIPNRSHRGPGAVPFHQAQ-RALSAT 193
           TSS+P   HR    VP H A+ + L AT
Sbjct: 150 TSSVPLTIHRRSPGVPHHVAEPQHLGAT 177


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 113 TSSIPNRSHRGPGAVPFHQAQ-RALSAT 193
           TSS+P   HR    VP H A+ + L AT
Sbjct: 150 TSSVPLTIHRRSPGVPHHVAEPQHLGAT 177


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,554
Number of Sequences: 2352
Number of extensions: 10379
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)