Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0416
(314 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55495| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-05
SB_28895| Best HMM Match : p450 (HMM E-Value=0) 27 2.4
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_33129| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_40079| Best HMM Match : Ank (HMM E-Value=3.2e-17) 26 5.6
SB_21559| Best HMM Match : Hormone_4 (HMM E-Value=1.3) 26 5.6
SB_47941| Best HMM Match : Ank (HMM E-Value=3.2e-17) 26 5.6
SB_19779| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_17213| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_3147| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.6
SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13) 26 5.6
SB_45281| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.4
SB_36661| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.4
SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0) 25 9.8
SB_57013| Best HMM Match : Pico_P2A (HMM E-Value=3.2) 25 9.8
>SB_55495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 858
Score = 45.2 bits (102), Expect = 1e-05
Identities = 21/59 (35%), Positives = 41/59 (69%)
Frame = +2
Query: 137 QALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACXKEPSESDIEAILNSIVSIM 313
+A E+R + K GA++ EE S ++D+L +I+ C C KE ++++E+++NSI+S++
Sbjct: 49 KAQEIRTFLKEQGADLKEE-SITPLQDELAEILECCQVCFKE--DAELESVMNSILSLV 104
>SB_28895| Best HMM Match : p450 (HMM E-Value=0)
Length = 492
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 149 LRRYFKSLGAEISEEKSPKGIEDDLHKIVGV 241
LR+YF SLG I++E + +ED L+ VGV
Sbjct: 134 LRKYFPSLGDTIAKELAK--LEDKLNSDVGV 162
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 128 LEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACXKEPSESDIEAILNSIVS 307
L+D ELR SLGA + +E L ++ G+C+ E + E + N V
Sbjct: 2972 LDDMITELRNAEISLGASLMGTPDLDQLESQLEEVKGLCE--DMEGKQELFENLKNKGVD 3029
Query: 308 IM 313
+M
Sbjct: 3030 MM 3031
>SB_33129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 307 RDNTVQNGFDIRFTRLFXTSITNPNDLMQII-LNAL 203
R N V+NGFDI + ++T+P ++ LN++
Sbjct: 77 RQNCVRNGFDITVLTRYSEAVTHPRTYRALLSLNSV 112
>SB_40079| Best HMM Match : Ank (HMM E-Value=3.2e-17)
Length = 250
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 269 HSALXNKHHKPQRSYADHPQCP*VIFLLKSR 177
H A NK RSYADH ++ LLK +
Sbjct: 210 HGADVNKRDADNRSYADHTDNLEILKLLKGK 240
>SB_21559| Best HMM Match : Hormone_4 (HMM E-Value=1.3)
Length = 95
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -3
Query: 297 LFRMASISDSLGSXKQASQTPTILCRSSSMPLGDFSSEISA 175
L RM D L + ++ C+ + P GDF E++A
Sbjct: 40 LSRMLQYGDGLTEVLELWTRFSVFCQGQNCPRGDFEKEMNA 80
>SB_47941| Best HMM Match : Ank (HMM E-Value=3.2e-17)
Length = 250
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 269 HSALXNKHHKPQRSYADHPQCP*VIFLLKSR 177
H A NK RSYADH ++ LLK +
Sbjct: 210 HGADVNKRDADNRSYADHTDNLEILKLLKGK 240
>SB_19779| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/55 (23%), Positives = 27/55 (49%)
Frame = +2
Query: 128 LEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACXKEPSESDIEAIL 292
+ED + R + ++ ++ +++ S DD ++ VC C KE + + IL
Sbjct: 133 VEDYYCQAFRAYSTVHSQKNKDSSMNDGSDDEDEVSLVCPGCAKESEDCGCKQIL 187
>SB_17213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 288 MASISDSLGSXKQASQTPTILCRSSSMPLGDFSSEISAP 172
+ S+ DSLG S TP+ + P+G +S + P
Sbjct: 432 LRSLRDSLGGSHSLSITPSGVGPGKKQPIGGSNSNVMTP 470
>SB_3147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 200 PKGIEDDLHKIVGVCDACXKEPSESDIEAIL 292
P GI D+ +V C+AC K + + IL
Sbjct: 422 PPGITKDVVSLVKTCEACQKHQRHNQKQPIL 452
>SB_1231| Best HMM Match : UCH (HMM E-Value=1e-13)
Length = 969
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 122 ISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDA-CXK-EPSESDIEAILN 295
+SLE+ AL+ L + S+ + G+++ ++ +C A C + + SD++ N
Sbjct: 575 LSLEEDALDSENKSNGLECDDSKPSNGSGVDESVNATSDMCSANCTRVNDAYSDMDTTSN 634
Query: 296 S 298
S
Sbjct: 635 S 635
>SB_45281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 101 GPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIV 235
GP +FM +S ED R + E ++E +P+ I L K V
Sbjct: 738 GPTMFMVLSKEDAVSGWRSLMGPVDPEQAKEMAPESIRAALGKDV 782
>SB_36661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -3
Query: 243 QTPTILCRSSSMP--LGDFSSEISA 175
QTPT LCR SS P L +F+ E A
Sbjct: 388 QTPTRLCRGSSTPYNLQEFAVEAMA 412
>SB_22404| Best HMM Match : SNF2_N (HMM E-Value=0)
Length = 1918
Score = 25.4 bits (53), Expect = 9.8
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +2
Query: 116 MDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACXKEPSESDIE 283
+++ +D + + ++L ++ EE+S + D+ D E +ESDIE
Sbjct: 565 IELLQQDSEMTIEEILENLPPQMLEERSDESSMDEDSDADSSADDASDESNESDIE 620
>SB_57013| Best HMM Match : Pico_P2A (HMM E-Value=3.2)
Length = 474
Score = 25.4 bits (53), Expect = 9.8
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 296 CSEWLRYPIHSALXNKHHKPQRSYADHP 213
CS W RY I S K+ + Y P
Sbjct: 444 CSSWTRYAIESQEVGKNREKAMKYYQEP 471
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,628,731
Number of Sequences: 59808
Number of extensions: 144369
Number of successful extensions: 473
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 400488992
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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