Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0410
         (726 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g14840.1 68414.m01775 expressed protein                             29   3.1  
At3g62700.1 68416.m07043 glutathione-conjugate transporter, puta...    28   5.5  
At4g11900.1 68417.m01893 S-locus lectin protein kinase family pr...    28   7.2  
At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4...    28   7.2  
At3g51080.1 68416.m05593 zinc finger (GATA type) family protein ...    27   9.6  

>At1g14840.1 68414.m01775 expressed protein
          Length = 604

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
 Frame = +3

Query: 387 KASYPWREPNHSHTLRPITVDDVGGEESSQDATANNNQDP--LLNMLMR----LQEAANY 548
           ++++P    +   T R  +   + GEE S D   NN+  P  L ++L +    L++AA+ 
Sbjct: 457 RSNFPLNHKSSEGTSRGESPSSIKGEEESADKATNNDSVPGVLYDLLQKEVITLRKAAHE 516

Query: 549 SGNQSQDSDNA 581
                +D D A
Sbjct: 517 KDQSLRDKDEA 527


>At3g62700.1 68416.m07043 glutathione-conjugate transporter, putative
            similar to glutathione-conjugate transporter AtMRP4
            GI:2959767 from [Arabidopsis thaliana]
          Length = 1539

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 375  LQHIKASYPWREPNHSHTLRPITVDDVGGEESSQDATANNNQDPLLNMLMRLQE 536
            L+ +K  Y    PN    L+ +T+D  GGE+        + +  L+ +L RL E
Sbjct: 1299 LEDVKVRY---RPNTPLVLKGLTIDIKGGEKIGVVGRTGSGKSTLIQVLFRLVE 1349


>At4g11900.1 68417.m01893 S-locus lectin protein kinase family
           protein contains Pfam domains, PF00954: S-locus
           glycoprotein family, PF00069: Protein kinase domain, and
           PF01453: Lectin (probable mannose binding)
          Length = 849

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 5/33 (15%)
 Frame = -2

Query: 170 GPNS-----WQPF*HRSQSWLPSAESQLQRE*F 87
           GPNS     WQ F H S +WLP  + +L  + F
Sbjct: 170 GPNSSAAVLWQSFDHPSDTWLPGGKIRLGSQLF 202


>At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4)
            identical to AtMRP4 GI:2959767 from [Arabidopsis
            thaliana]
          Length = 1516

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +3

Query: 375  LQHIKASYPWREPNHSHTLRPITVDDVGGEESSQDATANNNQDPLLNMLMRLQE 536
            L+ +K  Y    PN    L+ IT+D  GGE+        + +  L+ +L RL E
Sbjct: 1276 LEDLKVRY---RPNTPLVLKGITLDIKGGEKVGVVGRTGSGKSTLIQVLFRLVE 1326


>At3g51080.1 68416.m05593 zinc finger (GATA type) family protein
           GATA transcription factor 3 - Arabidopsis thaliana,
           PIR:T05288
          Length = 312

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
 Frame = +3

Query: 234 LACPMDLEASQAWFAD-VWNYSIVPYASEAVREGVALYGRRRHAAVDPLQH---IKASYP 401
           L+ PMD  A   W ++ V + S  PY S    + V L G RRH  V P++     K+ +P
Sbjct: 83  LSVPMDDIAELEWLSNFVDDSSFTPY-SAPTNKPVWLTGNRRH-LVQPVKEETCFKSQHP 140

Query: 402 WREPNHSHTLRPITVDDVGGE---ESSQDATANNNQDP 506
             +         + V   G +   +SS  +T +++  P
Sbjct: 141 AVKTRPKRARTGVRVWSHGSQSLTDSSSSSTTSSSSSP 178


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,295,609
Number of Sequences: 28952
Number of extensions: 339156
Number of successful extensions: 917
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)