Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0406
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 1e-29
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 90 1e-18
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 87 8e-18
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 77 2e-14
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 69 4e-12
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 59 3e-09
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 58 6e-09
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 54 9e-08
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 52 4e-07
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 49 3e-06
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 49 3e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 4e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 47 1e-05
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 46 3e-05
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 44 8e-05
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 41 0.001
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 41 0.001
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 40 0.001
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 36 0.027
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 33 0.25
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 33 0.25
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 1.8
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 29 3.1
SB_31039| Best HMM Match : Fibrinogen_C (HMM E-Value=4.2e-39) 29 4.1
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 7.1
SB_19261| Best HMM Match : Keratin_B2 (HMM E-Value=3) 28 7.1
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 126 bits (305), Expect = 1e-29
Identities = 53/129 (41%), Positives = 83/129 (64%)
Frame = +3
Query: 237 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 416
P+ + +PFNKNFY+ HP + K+S E+++ R + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 417 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR 596
+ ++ + Y +PT IQ Q PIA+SG++++G+A+TGSGKT A++ PA+VHI +QP ++
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586
Query: 597 RGDGPIALV 623
GDGPI L+
Sbjct: 587 VGDGPIVLI 595
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 90.2 bits (214), Expect = 1e-18
Identities = 43/120 (35%), Positives = 69/120 (57%)
Frame = +3
Query: 267 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 446
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 447 YKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 626
++ PTPIQ Q MSG++++G+A+TGSGKTLAY LP + + + P GD P+AL+L
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALIL 151
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 87.4 bits (207), Expect = 8e-18
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 4/102 (3%)
Frame = +3
Query: 333 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 512
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 513 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVL 626
GVA+TGSGKT A+ +P +V I P I R + GP AL+L
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALIL 184
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 76.6 bits (180), Expect = 2e-14
Identities = 45/106 (42%), Positives = 59/106 (55%)
Frame = +3
Query: 309 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 488
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ---- 112
Query: 489 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 626
+ILP IVHIN+QP ++ GDGPI LVL
Sbjct: 113 --------------------FILPGIVHINHQPLLQPGDGPIVLVL 138
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/88 (35%), Positives = 51/88 (57%)
Frame = +3
Query: 282 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 461
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 462 PIQAQGWPIAMSGKNLVGVAQTGSGKTL 545
PIQ Q P+ +SG++++ A TGSGK L
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLL 248
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 67.7 bits (158), Expect = 7e-12
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = +3
Query: 348 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 527
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ AQT
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 528 GSGKTLAYILPAIVHINN 581
GSGKT A++LP + + N
Sbjct: 758 GSGKTAAFLLPVMTSMMN 775
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/88 (38%), Positives = 47/88 (53%)
Frame = +3
Query: 357 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSG 536
VSG I F E F + + + GY+ PTP+Q PI M+G++L+ AQTGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 537 KTLAYILPAIVHINNQPPIRRGDGPIAL 620
KT AY+LP + + Q P+AL
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLAL 556
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +3
Query: 222 QNMRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFE 398
+ ++ D +V QPF K+FY P + K +P E +E+R + E + V G P++ +
Sbjct: 49 EELQPVDHKTVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWA 108
Query: 399 EANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 527
+ + +K Y++PTPIQAQ P+ MSG++++ + T
Sbjct: 109 QTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMT 151
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +3
Query: 384 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 563
++ F + G+ G+ PT IQ QG P+A+SG++++G A+TGSGKTLA+++P
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 564 I 566
I
Sbjct: 109 I 109
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 58.0 bits (134), Expect = 6e-09
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +3
Query: 348 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 527
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ AQT
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 180
Query: 528 GSGKT 542
GSGKT
Sbjct: 181 GSGKT 185
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +3
Query: 384 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 563
I FE+ + + + V GYK+PTP+Q PI ++L+ AQTGSGKT A+++P
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 564 IVHINNQPP 590
+ I + P
Sbjct: 934 LSRIYMEGP 942
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +3
Query: 348 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 527
EV + G P + F +Y + +G PT +Q WP + G+++ GVA
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 528 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVL 626
GSGK LAY+LP I I + +GP+ L+L
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLIL 269
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 52.0 bits (119), Expect = 4e-07
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +3
Query: 426 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 587
+ V +G+ PTPIQA P+A+ GK++ A TG+GKT A++LP + + +P
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP 76
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 426 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINN-QPPIRRG 602
QG+K MG+ T IQ + + G++L+G A+TGSGKTLA+++P + + Q R G
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNG 644
Query: 603 DGPIAL 620
G I +
Sbjct: 645 TGVIII 650
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/58 (32%), Positives = 38/58 (65%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 566
FE+ + G+ G+ +P+PIQ + P+A++G++++ A+ G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/58 (32%), Positives = 38/58 (65%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 566
FE+ + G+ G+ +P+PIQ + P+A++G++++ A+ G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +3
Query: 321 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 488
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 489 AMSGKNLVG 515
G G
Sbjct: 197 MAHGPKKSG 205
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 411 PDYVQQGVKTMGYKEPTPIQAQGWPIAMS-GKNLVGVAQTGSGKTLAYILPAIVHI 575
PD + + + G+ +PTPIQ+ P A+ ++++G A+TGSGKTLA+ +P I HI
Sbjct: 139 PD-ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHI 193
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +3
Query: 441 MGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 587
MG K+PT IQ P + G++ +G A+TGSGKT A+ LP + + + P
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDP 73
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Frame = +3
Query: 345 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK--NL 509
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++ N+
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNM 145
Query: 510 VGVAQTGSGKTLAYILPAIVHINNQPP 590
+ +Q+G+GKT A++L + ++ P
Sbjct: 146 IAQSQSGTGKTAAFVLTMLSRVDATKP 172
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/52 (38%), Positives = 35/52 (67%)
Frame = +3
Query: 411 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 566
P V++ +K MG +P PIQ + P S K+L+ ++TG+GK+L ++LP++
Sbjct: 169 PKLVEK-LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV 219
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +3
Query: 462 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVL 626
PIQA + G++++G A+TG+GKTL++ LP + + + + +RG P LV+
Sbjct: 98 PIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVM 153
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
Frame = +3
Query: 288 PHPTVLK-RSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 461
P TV K +E N T S + + F D V + + + +PT
Sbjct: 343 PEATVSKGEKEVTIEAVGQNPAFTPDSDMAFRQRVYSFAGLGLRDDVLKALDALNIHQPT 402
Query: 462 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG 602
IQ P + +++ AQTGSGKTLAY+ P +VH + R G
Sbjct: 403 VIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAP-LVHRLREDEERHG 448
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/50 (30%), Positives = 33/50 (66%)
Frame = +3
Query: 426 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 575
+G+ G+++P+PIQ + P+ G +L+ A++G+GKT + + A+ ++
Sbjct: 26 RGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENV 75
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = +3
Query: 483 PIAMSGKNLVGVAQTGSGKTLAYILP 560
P+ M GK++V +A+TGSGKT A+++P
Sbjct: 313 PLVMDGKDVVAMARTGSGKTAAFLIP 338
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 35.9 bits (79), Expect = 0.027
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +3
Query: 273 KNFYDPHPTVLKRSPYEVEEYRNNHEV-TVSGVEVHNPIQYFEEANFPDYVQQGVKTMGY 449
K D + LK E +E+ N + TV+ + P+ E P V + + +G+
Sbjct: 467 KELPDENDENLKEFAPEDDEFLKNLSLDTVAQMAAGIPV----ETETPPEVYKALGQLGF 522
Query: 450 KEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 587
Q Q +SG + + V TG+GK+L Y LPA ++ P
Sbjct: 523 SSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRSP 568
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 35.5 bits (78), Expect = 0.036
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +3
Query: 435 KTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 584
+T G+++P+ IQ + + G++++ AQ+G+GKT + + + I+ Q
Sbjct: 13 ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQ 62
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 444 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 569
GY + P+Q Q ++ K+ + + TG+GKT+ Y +PA++
Sbjct: 136 GYIDFRPMQRQAIDTLLAEKDSLILLPTGAGKTICYAIPALL 177
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/29 (44%), Positives = 22/29 (75%)
Frame = +3
Query: 501 KNLVGVAQTGSGKTLAYILPAIVHINNQP 587
K+++G+A+TGSGKT A+ LP + + + P
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP 30
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 369 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 482
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 279 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 419
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 492 MSGKNLVGVAQTGSGKTLAYILPAIV 569
MSG + + + TG GK+L + LPA+V
Sbjct: 102 MSGVDCILIMPTGGGKSLCFQLPAVV 127
>SB_31039| Best HMM Match : Fibrinogen_C (HMM E-Value=4.2e-39)
Length = 411
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 264 VGVKQNPNLGDACSDLQRILFSHQ--ILQILQIYCH 163
+GVKQ P L +CS++Q F+H I I CH
Sbjct: 269 IGVKQQPPLLPSCSEIQSEHFAHTSGIFPIALTPCH 304
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 228 CSDLQRILFSHQILQILQIYCHRC-QIETN 142
CS +L +IL+ +YC +C Q ETN
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQAETN 43
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -1
Query: 159 CQIETNYRRICCLLQIWN-HRFHGYYSS 79
C + +YRR CC L +W H + Y+SS
Sbjct: 218 CCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
>SB_19261| Best HMM Match : Keratin_B2 (HMM E-Value=3)
Length = 333
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +3
Query: 444 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 608
G+ P+ Q S V A T T AY+ P +V PP+R G G
Sbjct: 231 GFSPTGPVNGQPTNSTSSSPFSVTSADTIINPTAAYVRPGMVPREIIPPLRDGSG 285
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 465 IQAQGWPIAMSGKNLVGVAQ-TGSGKTLAYILPAIV 569
+Q + G+ V V+ TGSGK+L Y LPA+V
Sbjct: 22 LQQRACETVSKGRQDVFVSMPTGSGKSLCYQLPAVV 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,945,005
Number of Sequences: 59808
Number of extensions: 356347
Number of successful extensions: 965
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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