Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0406
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 120 9e-28
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 115 2e-26
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 104 5e-23
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 97 7e-21
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 78 6e-15
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 75 4e-14
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 73 2e-13
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 73 2e-13
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 73 2e-13
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 69 3e-12
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 59 3e-09
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 59 3e-09
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 59 3e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 58 7e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 58 7e-09
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 56 2e-08
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 54 6e-08
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 54 6e-08
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 54 6e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 51 8e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 51 8e-07
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 48 7e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 48 7e-06
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 44 7e-05
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 44 9e-05
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 42 3e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 42 3e-04
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 42 5e-04
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 41 6e-04
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 41 6e-04
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 41 6e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 40 0.001
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.002
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 34 0.096
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 34 0.096
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.22
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.39
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 31 0.51
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.51
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 31 0.67
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 31 0.67
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 0.89
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 0.89
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 2.1
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 2.1
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 28 4.8
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 28 4.8
AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine re... 28 4.8
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 6.3
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 27 8.3
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 120 bits (289), Expect = 9e-28
Identities = 55/133 (41%), Positives = 88/133 (66%)
Frame = +3
Query: 228 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN 407
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 408 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 587
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 588 PIRRGDGPIALVL 626
+RG+GP LVL
Sbjct: 196 HRQRGEGPAVLVL 208
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 115 bits (277), Expect = 2e-26
Identities = 49/129 (37%), Positives = 82/129 (63%)
Frame = +3
Query: 240 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDY 419
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 420 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 599
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 600 GDGPIALVL 626
G+GP+A+++
Sbjct: 336 GEGPVAVIV 344
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 104 bits (250), Expect = 5e-23
Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 1/134 (0%)
Frame = +3
Query: 228 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEA 404
+ + D V + F KNFY + + + EV+ YR + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 405 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 584
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 585 PPIRRGDGPIALVL 626
P + GDGPIA++L
Sbjct: 370 PELEEGDGPIAVIL 383
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 97.5 bits (232), Expect = 7e-21
Identities = 44/102 (43%), Positives = 68/102 (66%), Gaps = 4/102 (3%)
Frame = +3
Query: 333 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 512
+R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 513 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVL 626
GVA+TGSGKT A++LP +V I + P + R + GP A+++
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIM 384
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 77.8 bits (183), Expect = 6e-15
Identities = 42/117 (35%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
Frame = +3
Query: 258 LQPFNKNFYDPHPTVLKRSPYEVEE-YRNNHEVTV------SGVEVHNPIQYFEEANFPD 416
++P ++ Y SP +++E Y N + V S V++ P+ FE+A +
Sbjct: 33 MKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAFGSN 92
Query: 417 YVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 584
G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSGKTLA++LPA++HI+ Q
Sbjct: 93 ASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQ 149
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 74.9 bits (176), Expect = 4e-14
Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Frame = +3
Query: 288 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 464
P + ++S + E R ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 465 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVL 626
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP L++
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLII 272
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = +3
Query: 342 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 521
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 522 QTGSGKTLAYILPAIVHI 575
QTGSGKT A++LP I HI
Sbjct: 184 QTGSGKTAAFLLPIIQHI 201
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = +3
Query: 342 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 521
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 522 QTGSGKTLAYILPAIVHI 575
QTGSGKT A++LP I HI
Sbjct: 168 QTGSGKTAAFLLPIIQHI 185
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/78 (44%), Positives = 47/78 (60%)
Frame = +3
Query: 342 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 521
N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++L+ A
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 522 QTGSGKTLAYILPAIVHI 575
QTGSGKT A++LP I HI
Sbjct: 165 QTGSGKTAAFLLPIIQHI 182
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/80 (36%), Positives = 47/80 (58%)
Frame = +3
Query: 351 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 530
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 531 SGKTLAYILPAIVHINNQPP 590
SGKT A+++P + I P
Sbjct: 214 SGKTAAFLVPLVNAILQDGP 233
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +3
Query: 381 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 560
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 561 AIVHI 575
+ +
Sbjct: 399 IMTRL 403
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +3
Query: 381 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 560
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 561 AIVHI 575
+ +
Sbjct: 399 IMTRL 403
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/65 (40%), Positives = 39/65 (60%)
Frame = +3
Query: 381 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 560
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 561 AIVHI 575
+ +
Sbjct: 399 IMTRL 403
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 57.6 bits (133), Expect = 7e-09
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +3
Query: 381 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 560
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 57.6 bits (133), Expect = 7e-09
Identities = 24/60 (40%), Positives = 38/60 (63%)
Frame = +3
Query: 381 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 560
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 572
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 573 INNQP 587
+ +P
Sbjct: 210 MIYRP 214
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 572
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 573 INNQPPIR-RGDG 608
+ ++ + G+G
Sbjct: 614 LIDENDLNTAGEG 626
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 572
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 573 INNQPPIR-RGDG 608
+ ++ + G+G
Sbjct: 614 LIDENDLNTAGEG 626
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 54.4 bits (125), Expect = 6e-08
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 572
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 573 INNQPPIR-RGDG 608
+ ++ + G+G
Sbjct: 614 LIDENDLNTAGEG 626
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +3
Query: 375 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 554
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 555 LPAI 566
+P +
Sbjct: 80 IPML 83
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/64 (32%), Positives = 39/64 (60%)
Frame = +3
Query: 375 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 554
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 555 LPAI 566
+P +
Sbjct: 80 IPML 83
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/92 (30%), Positives = 46/92 (50%)
Frame = +3
Query: 300 VLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 479
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 480 WPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 575
P +N++ A TGSGKTLA+ LP I I
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEI 188
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/65 (33%), Positives = 39/65 (60%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 572
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 573 INNQP 587
++ P
Sbjct: 151 LSVDP 155
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 50.8 bits (116), Expect = 8e-07
Identities = 22/65 (33%), Positives = 39/65 (60%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 572
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 573 INNQP 587
++ P
Sbjct: 151 LSVDP 155
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 411 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI 575
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARL 218
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/65 (32%), Positives = 38/65 (58%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 572
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 573 INNQP 587
+ + P
Sbjct: 106 LLDHP 110
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 47.6 bits (108), Expect = 7e-06
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 411 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 575
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKL 798
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 47.6 bits (108), Expect = 7e-06
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 411 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI 575
P + +K M PTPIQ + M G ++V A TGSGKTLA+++P ++ +
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKL 798
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 47.6 bits (108), Expect = 7e-06
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = +3
Query: 426 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 566
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = +3
Query: 426 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 566
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI 127
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 572
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 573 INNQPPIRRGD-GPIALVL 626
+ + G GP A+++
Sbjct: 151 LIAESKTNDGSVGPSAVII 169
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/56 (35%), Positives = 37/56 (66%)
Frame = +3
Query: 429 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR 596
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALK 110
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/69 (23%), Positives = 41/69 (59%)
Frame = +3
Query: 384 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 563
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 564 IVHINNQPP 590
+ I+++ P
Sbjct: 88 LQRIDHEDP 96
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/69 (23%), Positives = 41/69 (59%)
Frame = +3
Query: 384 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 563
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 564 IVHINNQPP 590
+ I+++ P
Sbjct: 88 LQRIDHEDP 96
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/69 (23%), Positives = 39/69 (56%)
Frame = +3
Query: 378 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 557
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 558 PAIVHINNQ 584
+ ++ Q
Sbjct: 83 SVLQSLDTQ 91
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 384 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 557
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 558 PAIVHIN 578
+ I+
Sbjct: 268 TMLCRID 274
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 384 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 557
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 558 PAIVHIN 578
+ I+
Sbjct: 293 TMLCRID 299
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 384 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 557
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 558 PAIVHIN 578
+ I+
Sbjct: 677 TMLCRID 683
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/64 (25%), Positives = 39/64 (60%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 572
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 573 INNQ 584
++++
Sbjct: 84 LDSR 87
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/64 (25%), Positives = 39/64 (60%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 572
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 573 INNQ 584
++++
Sbjct: 84 LDSR 87
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/44 (40%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +3
Query: 447 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI 575
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARL 51
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/67 (22%), Positives = 38/67 (56%)
Frame = +3
Query: 384 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 563
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 564 IVHINNQ 584
+ ++ Q
Sbjct: 85 LQSLDTQ 91
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 393 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 560
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 33.9 bits (74), Expect = 0.096
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 489 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 584
A+ GKN V VA TGSGKT I A+ HI +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 33.9 bits (74), Expect = 0.096
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 384 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 563
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 564 IVHINN 581
+ I N
Sbjct: 68 MRMIQN 73
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 483 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 587
P + +++ A TGSGKT+ Y+LP + + ++P
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP 185
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 444 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 587
G+K PIQ Q + + S +N++ A GSGKT L + H N P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTP 1366
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 465 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 566
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 465 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 566
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 94 VETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKN 210
+ETV+ LE N +RL+ A VA E LE + GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 426 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHIN 578
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGID 59
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 0.89
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 462 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 569
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 0.89
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 462 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 569
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 536 AGTRLSYAN*ILS---RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLN 366
+G L AN IL R +YR N + + + Y + +I + F + + ++NLN
Sbjct: 13 SGVFLFIANIILFLVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLN 72
Query: 365 ATYSYLVIISVLFD 324
T +L I+++F+
Sbjct: 73 VTNEWLNKIAIIFN 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 536 AGTRLSYAN*ILS---RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLN 366
+G L AN IL R +YR N + + + Y + +I + F + + ++NLN
Sbjct: 13 SGVFLFIANIILFLVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLN 72
Query: 365 ATYSYLVIISVLFD 324
T +L I+++F+
Sbjct: 73 VTNEWLNKIAIIFN 86
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 525 TGSGKTLAYILPAIVH 572
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 146 RIIAEFVASSKFGTTVSTAIIPV 78
++I +FVA S G T+STA P+
Sbjct: 221 QLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -2
Query: 146 RIIAEFVASSKFGTTVSTAIIPV 78
++I +FVA S G T+STA P+
Sbjct: 130 QLIGDFVAGSLLGATISTAFFPL 152
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 486 IAMSGKNLVGVAQTGSGKTL 545
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 28.3 bits (60), Expect = 4.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 486 IAMSGKNLVGVAQTGSGKTL 545
+A+ GKN + A TGSGKT+
Sbjct: 303 VALQGKNTIVTAPTGSGKTV 322
>AC024881-8|AAK71411.2| 318|Caenorhabditis elegans Serpentine
receptor, class t protein53 protein.
Length = 318
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = -2
Query: 497 RHSYRPALSLNRRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVIISVLFDFI 318
R S+RP + +R+ F+ L L+H+ I + +M +L IIS ++
Sbjct: 224 RKSFRPKRTARQRQIFLQAFLLCLIHLSASILYV-----VMQFIEVPKFLTIIS---QYL 275
Query: 317 W*SFENCRMWIIKVF 273
W + C + I +F
Sbjct: 276 WQLAQGCPVIIYLIF 290
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 222 DLQRILFSHQILQILQIYCHRCQIETN-YR-RICCL 121
D +S I QI+ +CH+ +++TN +R RI CL
Sbjct: 268 DASIFFYSFAIPQIMTCFCHKWKVQTNTFRIRIGCL 303
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 288 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 446
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 288 PHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 446
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 243 WDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPI 386
+ + L+ FN+ Y+ PT L + +E+YR + + G+ NP+
Sbjct: 165 YSNALLKSFNE-IYNDKPTALIENLKTIEKYRKGNVLNQMGLRHRNPL 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,348,933
Number of Sequences: 27780
Number of extensions: 273176
Number of successful extensions: 872
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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