Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0405
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3ERY9 Cluster: Glycosyltransferase; n=1; Leptospirillu...    36   0.96 
UniRef50_Q5ZSU7 Cluster: Putative uncharacterized protein; n=2; ...    33   5.1  
UniRef50_UPI0000E462E9 Cluster: PREDICTED: hypothetical protein,...    33   6.7  

>UniRef50_A3ERY9 Cluster: Glycosyltransferase; n=1; Leptospirillum
           sp. Group II UBA|Rep: Glycosyltransferase -
           Leptospirillum sp. Group II UBA
          Length = 448

 Score = 35.9 bits (79), Expect = 0.96
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = +2

Query: 458 LRKFLAVNYRFKKIRFILWSL*NQIFHCIRYPPSTKRIQEPSRL 589
           L+K +  + R  KI FI W L  ++FH + +PP T+ + +PS +
Sbjct: 13  LQKRMEAHERVNKIPFIPWKL-KRVFHHLLFPPHTEILSQPSSI 55


>UniRef50_Q5ZSU7 Cluster: Putative uncharacterized protein; n=2;
           Legionella pneumophila|Rep: Putative uncharacterized
           protein - Legionella pneumophila subsp. pneumophila
           (strain Philadelphia 1 /ATCC 33152 / DSM 7513)
          Length = 264

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = +3

Query: 426 SFAYLRLPTFNYVNF*LSTIGLKKYVSSFGHSKTRFFIAYGTHLVLNGYRSP 581
           S +YL    FNY  F  S  G        G S+TR+F      L++NGY  P
Sbjct: 88  SLSYLDHEVFNYQKFQTSLPGTSGTPGFTGRSRTRYFELDNKALLVNGYLHP 139


>UniRef50_UPI0000E462E9 Cluster: PREDICTED: hypothetical protein,
           partial; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: hypothetical protein, partial -
           Strongylocentrotus purpuratus
          Length = 416

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 24/66 (36%), Positives = 31/66 (46%)
 Frame = +1

Query: 496 NTFHPLVTLKPDFSLHTVPT*Y*TDTGALPPSATHPETSCLRLSRPSNLNTSYPYGLTRR 675
           NT  P++T  P+ S         T+T + P   T PETS    S  SN NTS P  +T  
Sbjct: 148 NTSSPILTTFPETSSSPESDNSTTNTSS-PTRTTFPETSSSPESDNSNTNTSSPVLITSP 206

Query: 676 PTTSEP 693
             +S P
Sbjct: 207 GPSSSP 212


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,705,298
Number of Sequences: 1657284
Number of extensions: 13784299
Number of successful extensions: 26438
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26427
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)