Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0405
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.59 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.4  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.4  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    23   2.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.7  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 0.59
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2

Query: 95  SCILKTKVLQTMFSAPTMDVYKRNFVRSVLMS 190
           S  LK  VLQ+++++PT D+     + + LMS
Sbjct: 552 SSFLKISVLQSLWASPTCDLMYEFQIFTFLMS 583


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +1

Query: 583 PPSATHPETSCLRLSRPSNLNTSYPYGLTRR--PTTSEPVL 699
           P + THP  SC      S+   + P  L+    P  S P L
Sbjct: 89  PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPL 129



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 571 TGALPPSATHPETSCLRLSRPSNLNTSYPYGLT 669
           T   PP +T P      LS PSN N +   GLT
Sbjct: 118 TNGAPPRSTPP------LSTPSNSNATKSSGLT 144


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +1

Query: 583 PPSATHPETSCLRLSRPSNLNTSYPYGLTRR--PTTSEPVL 699
           P + THP  SC      S+   + P  L+    P  S P L
Sbjct: 89  PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPL 129



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 571 TGALPPSATHPETSCLRLSRPSNLNTSYPYGLT 669
           T   PP +T P      LS PSN N +   GLT
Sbjct: 118 TNGAPPRSTPP------LSTPSNSNATKSSGLT 144


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +1

Query: 583 PPSATHPETSCLRLSRPSNLNTSYPYGLTRR--PTTSEPVL 699
           P + THP  SC      S+   + P  L+    P  S P L
Sbjct: 89  PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPL 129



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 571 TGALPPSATHPETSCLRLSRPSNLNTSYPYGLT 669
           T   PP +T P      LS PSN N +   GLT
Sbjct: 118 TNGAPPRSTPP------LSTPSNSNATKSSGLT 144


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +1

Query: 583 PPSATHPETSCLRLSRPSNLNTSYPYGLTRR--PTTSEPVL 699
           P + THP  SC      S+   + P  L+    P  S P L
Sbjct: 89  PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPL 129



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 571 TGALPPSATHPETSCLRLSRPSNLNTSYPYGLT 669
           T   PP +T P      LS PSN N +   GLT
Sbjct: 118 TNGAPPRSTPP------LSTPSNSNATKSSGLT 144


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +1

Query: 583 PPSATHPETSCLRLSRPSNLNTSYPYGLTRR--PTTSEPVL 699
           P + THP  SC      S+   + P  L+    P  S P L
Sbjct: 89  PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPL 129



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 571 TGALPPSATHPETSCLRLSRPSNLNTSYPYGLT 669
           T   PP +T P      LS PSN N +   GLT
Sbjct: 118 TNGAPPRSTPP------LSTPSNSNATKSSGLT 144


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +1

Query: 583 PPSATHPETSCLRLSRPSNLNTSYPYGLTRR--PTTSEPVL 699
           P + THP  SC      S+   + P  L+    P  S P L
Sbjct: 45  PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPL 85



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 571 TGALPPSATHPETSCLRLSRPSNLNTSYPYGLT 669
           T   PP +T P      LS PSN N +   GLT
Sbjct: 74  TNGAPPRSTPP------LSTPSNSNATKSSGLT 100


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +1

Query: 583 PPSATHPETSCLRLSRPSNLNTSYPYGLTRR--PTTSEPVL 699
           P + THP  SC      S+   + P  L+    P  S P L
Sbjct: 89  PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPL 129



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 571 TGALPPSATHPETSCLRLSRPSNLNTSYPYGLT 669
           T   PP +T P      LS PSN N +   GLT
Sbjct: 118 TNGAPPRSTPP------LSTPSNSNATKSSGLT 144


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +1

Query: 583 PPSATHPETSCLRLSRPSNLNTSYPYGLTRR--PTTSEPVL 699
           P + THP  SC      S+   + P  L+    P  S P L
Sbjct: 89  PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPL 129



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 571 TGALPPSATHPETSCLRLSRPSNLNTSYPYGLT 669
           T   PP +T P      LS PSN N +   GLT
Sbjct: 118 TNGAPPRSTPP------LSTPSNSNATKSSGLT 144


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +1

Query: 583 PPSATHPETSCLRLSRPSNLNTSYPYGLTRR--PTTSEPVL 699
           P + THP  SC      S+   + P  L+    P  S P L
Sbjct: 89  PNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPPRSTPPL 129



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = +1

Query: 571 TGALPPSATHPETSCLRLSRPSNLNTSYPYGLT 669
           T   PP +T P      LS PSN N +   GLT
Sbjct: 118 TNGAPPRSTPP------LSTPSNSNATKSSGLT 144


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/41 (31%), Positives = 17/41 (41%)
 Frame = +1

Query: 577 ALPPSATHPETSCLRLSRPSNLNTSYPYGLTRRPTTSEPVL 699
           A P + + P      L  PS   T+Y +    RP    PVL
Sbjct: 180 ATPQAGSTPTYQTQGLLSPSYGGTTYSFTADFRPPQETPVL 220


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 580 LPPSATHPETSCLRLSRPSNLNTSYPYGLTRRPTTSE 690
           +PP  +       +++ PSN NTS     + +P +S+
Sbjct: 409 VPPMQSQIINPQPQITSPSNTNTSTSSTNSNKPNSSD 445


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,134
Number of Sequences: 336
Number of extensions: 3582
Number of successful extensions: 22
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)