Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0405
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY865075-2|AAW79481.1|  630|Drosophila melanogaster SR-CI protein.     32   0.65 
BT025817-1|ABF85717.1|  510|Drosophila melanogaster IP02915p pro...    30   2.6  
AY071550-1|AAL49172.1|  445|Drosophila melanogaster RE59904p pro...    30   2.6  
AE014296-3004|AAF49275.1|  510|Drosophila melanogaster CG5137-PA...    30   2.6  
AE014134-2094|AAF53120.1|  445|Drosophila melanogaster CG14937-P...    30   2.6  

>AY865075-2|AAW79481.1|  630|Drosophila melanogaster SR-CI protein.
          Length = 630

 Score = 32.3 bits (70), Expect = 0.65
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +1

Query: 568 DTGALPPSATHPETSCLRLSRPSNLNTSYPYGLTRRPTTS 687
           D  +LPP+ T   TS  R S  +   TS     T+RPTT+
Sbjct: 392 DISSLPPTVTSTSTSTTRKSTTTTSTTSTSTTTTKRPTTT 431


>BT025817-1|ABF85717.1|  510|Drosophila melanogaster IP02915p
           protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 16/60 (26%), Positives = 33/60 (55%)
 Frame = +1

Query: 19  SIL*LLEKKITSLAYRPSFIDA*STFLHSEDKSIADNVFSSYDGCIQKKFCEVRSNVQLR 198
           SIL +++K++ ++ YR SFI    T  +  ++ +   +    +G IQK+  E+  + + R
Sbjct: 210 SILVIIDKRLKNIFYRNSFIFK-RTSHYKREQELIKTLHGFTEGIIQKRIDEINQDAENR 268


>AY071550-1|AAL49172.1|  445|Drosophila melanogaster RE59904p
           protein.
          Length = 445

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +2

Query: 47  LRVSPTDRVLSTLSRHSCILKTKVLQTMFSAPTM---DVYKRNFVRSVLMSSYV*VSRPA 217
           L++ PT   +     H C +++ + Q + + P +    +Y RNFV  VL       S P 
Sbjct: 209 LQLCPTLEHIKIADYHVC-MESDITQQLLTLPNLRKLSIYSRNFVFDVLSRIVSPTSPPG 267

Query: 218 DGCQ 229
           DG Q
Sbjct: 268 DGRQ 271


>AE014296-3004|AAF49275.1|  510|Drosophila melanogaster CG5137-PA
           protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 16/60 (26%), Positives = 33/60 (55%)
 Frame = +1

Query: 19  SIL*LLEKKITSLAYRPSFIDA*STFLHSEDKSIADNVFSSYDGCIQKKFCEVRSNVQLR 198
           SIL +++K++ ++ YR SFI    T  +  ++ +   +    +G IQK+  E+  + + R
Sbjct: 210 SILVIIDKRLKNIFYRNSFIFK-RTSHYKREQELIKTLHGFTEGIIQKRIDEINQDAENR 268


>AE014134-2094|AAF53120.1|  445|Drosophila melanogaster CG14937-PA
           protein.
          Length = 445

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +2

Query: 47  LRVSPTDRVLSTLSRHSCILKTKVLQTMFSAPTM---DVYKRNFVRSVLMSSYV*VSRPA 217
           L++ PT   +     H C +++ + Q + + P +    +Y RNFV  VL       S P 
Sbjct: 209 LQLCPTLEHIKIADYHVC-MESDITQQLLTLPNLRKLSIYSRNFVFDVLSRIVSPTSPPG 267

Query: 218 DGCQ 229
           DG Q
Sbjct: 268 DGRQ 271


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,692,848
Number of Sequences: 53049
Number of extensions: 642184
Number of successful extensions: 1346
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1346
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)