Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0402
         (507 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    27   0.36 
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       26   0.64 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   4.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   4.5  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   4.5  
EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.     23   5.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.9  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   5.9  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 27.1 bits (57), Expect = 0.36
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 465 LISVTNSVGGPKLRGRRLLNESKHSRIYF 379
           LI +  ++GGPK   RRLL +   SR+ +
Sbjct: 736 LIQIMPNIGGPKSSWRRLLADVAFSRLRY 764


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = -1

Query: 153 SCTTFHFVVPLYPSSHTSHYLSKHSSFDHSRYT---DIASGMCH 31
           SCT    +   YP      YL++ +   H   T    IA+GM H
Sbjct: 218 SCTQLWLITHYYPQGSLFDYLNRTAISTHQMITICLSIANGMVH 261


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 399 KHSRIYFPYCREPLFQLYLRVKFLVAKLYYNF 304
           K + IY+  C EP   +   +      LYY F
Sbjct: 188 KRNEIYYNCCPEPYIDITFAILIRRKTLYYFF 219


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 492  STTAVPPPLLISVTNSVGGPKLRGRRLLNES 400
            STT VPPPL  +   +     L    L++ES
Sbjct: 1257 STTTVPPPLSGTGQTTTNSNLLTSMMLMDES 1287


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 492  STTAVPPPLLISVTNSVGGPKLRGRRLLNES 400
            STT VPPPL  +   +     L    L++ES
Sbjct: 1253 STTTVPPPLSGTGQTTTNSNLLTSMMLMDES 1283


>EF588468-1|ABQ96704.1|  176|Anopheles gambiae transposase protein.
          Length = 176

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 15/44 (34%), Positives = 24/44 (54%)
 Frame = -3

Query: 355 PIISESKVPRSKALLQLLRHTLKTQILLISLADTENIVSFFWYL 224
           PI SE+K    K L ++L   +  + L  +L ++EN   FF+ L
Sbjct: 98  PINSETK----KVLDRMLLDLICKECLPFNLVESENFKKFFYTL 137


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 494  ILPPRFHHRCSSVSRT 447
            +LPP+FH    + SRT
Sbjct: 1889 VLPPQFHALAKTTSRT 1904


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -1

Query: 399 KHSRIYFPYCREPLFQLYLRVKFLVAKLYYNF 304
           K + IY+  C EP   +   +      LYY F
Sbjct: 220 KRNEIYYNCCPEPYIDITFAIIIRRRTLYYFF 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,070
Number of Sequences: 2352
Number of extensions: 10017
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)