Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0402
         (507 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064632-1|AAH64632.1|  711|Homo sapiens MCF2L2 protein protein.       29   7.1  
AY172737-1|AAO19651.1| 1031|Homo sapiens Rho family guanine-nucl...    29   7.1  
AK124500-1|BAC85866.1|  628|Homo sapiens protein ( Homo sapiens ...    29   7.1  
AB020668-1|BAA74884.1|  982|Homo sapiens KIAA0861 protein protein.     29   7.1  

>BC064632-1|AAH64632.1|  711|Homo sapiens MCF2L2 protein protein.
          Length = 711

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 340 SKVPRSKALLQLLRHTLKTQILLISLADTENIVSFFW 230
           +K P SK  L  L +    + LL+ L +TE   S FW
Sbjct: 273 TKCPNSKLNLNQLENVTTMERLLVQLDETEKAFSHFW 309


>AY172737-1|AAO19651.1| 1031|Homo sapiens Rho family
           guanine-nucleotide exchange factor protein.
          Length = 1031

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 340 SKVPRSKALLQLLRHTLKTQILLISLADTENIVSFFW 230
           +K P SK  L  L +    + LL+ L +TE   S FW
Sbjct: 190 TKCPNSKLNLNQLENVTTMERLLVQLDETEKAFSHFW 226


>AK124500-1|BAC85866.1|  628|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42509 fis, clone BRACE2044286, moderately
           similar to GUANINE NUCLEOTIDE EXCHANGE FACTOR DBS. ).
          Length = 628

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 340 SKVPRSKALLQLLRHTLKTQILLISLADTENIVSFFW 230
           +K P SK  L  L +    + LL+ L +TE   S FW
Sbjct: 273 TKCPNSKLNLNQLENVTTMERLLVQLDETEKAFSHFW 309


>AB020668-1|BAA74884.1|  982|Homo sapiens KIAA0861 protein protein.
          Length = 982

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 340 SKVPRSKALLQLLRHTLKTQILLISLADTENIVSFFW 230
           +K P SK  L  L +    + LL+ L +TE   S FW
Sbjct: 141 TKCPNSKLNLNQLENVTTMERLLVQLDETEKAFSHFW 177


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,485,099
Number of Sequences: 237096
Number of extensions: 1388100
Number of successful extensions: 2860
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2858
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4706589866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)