Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0401
         (308 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   1.3  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   2.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   3.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    20   5.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    19   9.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    19   9.0  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    19   9.0  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    19   9.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 230  CVSKEAGHQTSAESW 274
            C  K+ GH+ S  SW
Sbjct: 1152 CEEKKPGHKPSTSSW 1166


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 131 HPAPSHSSLNTPTL 90
           HPA +HS+L +P +
Sbjct: 121 HPAAAHSALLSPAM 134


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 145 PVRVQGAHPSGPGQ*CSRFYVQELEAAL 228
           PVR+ G H  G    C++      E AL
Sbjct: 196 PVRIMGVHRPGFDNDCNKNTSTSKEIAL 223


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 118 DGAGCSQAPPVRVQGAHPSGP 180
           + +  S  PP+ + GA  +GP
Sbjct: 300 EDSSISGVPPLSIDGALEAGP 320


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +2

Query: 224 PYCVSKEAGHQTSAESWGTGRAVDRIP 304
           PY  +    HQ +A ++G   +   +P
Sbjct: 3   PYVSAAHHHHQAAAAAFGAAASGSMVP 29


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +2

Query: 224 PYCVSKEAGHQTSAESWGTGRAVDRIP 304
           PY  +    HQ +A ++G   +   +P
Sbjct: 62  PYVSAAHHHHQAAAAAFGAAASGSMVP 88


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +2

Query: 224 PYCVSKEAGHQTSAESWGTGRAVDRIP 304
           PY  +    HQ +A ++G   +   +P
Sbjct: 3   PYVSAAHHHHQAAAAAFGAAASGSMVP 29


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = +2

Query: 224 PYCVSKEAGHQTSAESWGTGRAVDRIP 304
           PY  +    HQ +A ++G   +   +P
Sbjct: 62  PYVSAAHHHHQAAAAAFGAAASGSMVP 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,371
Number of Sequences: 336
Number of extensions: 1265
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5624413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)