Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0401
(308 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 115 2e-26
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 115 3e-26
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 115 3e-26
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 115 3e-26
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 115 3e-26
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 115 3e-26
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 115 3e-26
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 115 3e-26
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 115 3e-26
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 115 3e-26
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 115 3e-26
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 115 3e-26
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 115 3e-26
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 115 3e-26
BC110614-1|AAI10615.1| 387|Homo sapiens CLEC4M protein protein. 29 3.7
BC038851-1|AAH38851.1| 399|Homo sapiens C-type lectin domain fa... 29 3.7
AY343913-1|AAR04559.1| 353|Homo sapiens L-SIGN variant protein. 29 3.7
AY042240-1|AAK91865.1| 263|Homo sapiens sDC-SIGN2 type III isof... 29 3.7
AY042238-1|AAK91863.1| 332|Homo sapiens sDC-SIGN2 type I isofor... 29 3.7
AY042234-1|AAK91859.1| 399|Homo sapiens mDC-SIGN2 type I isofor... 29 3.7
AF290887-1|AAK20998.1| 376|Homo sapiens L-SIGN protein. 29 3.7
AF245219-1|AAG13848.2| 399|Homo sapiens probable mannose bindin... 29 3.7
AF209481-1|AAG13815.2| 399|Homo sapiens probable mannose bindin... 29 3.7
AK075273-1|BAC11511.1| 183|Homo sapiens protein ( Homo sapiens ... 28 6.4
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 115 bits (277), Expect = 2e-26
Identities = 55/80 (68%), Positives = 65/80 (81%)
Frame = +2
Query: 68 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 247
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 248 GHQTSAESWGTGRAVDRIPR 307
GHQTSAESWGTGRAV RIPR
Sbjct: 73 GHQTSAESWGTGRAVARIPR 92
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQT AESWGTGRAV RIPR
Sbjct: 60 HQTRAESWGTGRAVARIPR 78
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 115 bits (276), Expect = 3e-26
Identities = 55/79 (69%), Positives = 64/79 (81%)
Frame = +2
Query: 71 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 251 HQTSAESWGTGRAVDRIPR 307
HQTSAESWGTGRAV RIPR
Sbjct: 60 HQTSAESWGTGRAVARIPR 78
>BC110614-1|AAI10615.1| 387|Homo sapiens CLEC4M protein protein.
Length = 387
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 244 GWSPNQC*IMGYWTCCRP 297
GW+ N+C + YW C +P
Sbjct: 363 GWNDNRCDVDNYWICKKP 380
>BC038851-1|AAH38851.1| 399|Homo sapiens C-type lectin domain
family 4, member M protein.
Length = 399
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 244 GWSPNQC*IMGYWTCCRP 297
GW+ N+C + YW C +P
Sbjct: 375 GWNDNRCDVDNYWICKKP 392
>AY343913-1|AAR04559.1| 353|Homo sapiens L-SIGN variant protein.
Length = 353
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 244 GWSPNQC*IMGYWTCCRP 297
GW+ N+C + YW C +P
Sbjct: 329 GWNDNRCDVDNYWICKKP 346
>AY042240-1|AAK91865.1| 263|Homo sapiens sDC-SIGN2 type III isoform
protein.
Length = 263
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 244 GWSPNQC*IMGYWTCCRP 297
GW+ N+C + YW C +P
Sbjct: 239 GWNDNRCDVDNYWICKKP 256
>AY042238-1|AAK91863.1| 332|Homo sapiens sDC-SIGN2 type I isoform
protein.
Length = 332
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 244 GWSPNQC*IMGYWTCCRP 297
GW+ N+C + YW C +P
Sbjct: 308 GWNDNRCDVDNYWICKKP 325
>AY042234-1|AAK91859.1| 399|Homo sapiens mDC-SIGN2 type I isoform
protein.
Length = 399
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 244 GWSPNQC*IMGYWTCCRP 297
GW+ N+C + YW C +P
Sbjct: 375 GWNDNRCDVDNYWICKKP 392
>AF290887-1|AAK20998.1| 376|Homo sapiens L-SIGN protein.
Length = 376
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 244 GWSPNQC*IMGYWTCCRP 297
GW+ N+C + YW C +P
Sbjct: 352 GWNDNRCDVDNYWICKKP 369
>AF245219-1|AAG13848.2| 399|Homo sapiens probable mannose binding
C-type lectin DC-SIGNR protein.
Length = 399
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 244 GWSPNQC*IMGYWTCCRP 297
GW+ N+C + YW C +P
Sbjct: 375 GWNDNRCDVDNYWICKKP 392
>AF209481-1|AAG13815.2| 399|Homo sapiens probable mannose binding
C-type lectin DC-SIGNR protein.
Length = 399
Score = 28.7 bits (61), Expect = 3.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1
Query: 244 GWSPNQC*IMGYWTCCRP 297
GW+ N+C + YW C +P
Sbjct: 375 GWNDNRCDVDNYWICKKP 392
>AK075273-1|BAC11511.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ90792 fis, clone THYRO1001608. ).
Length = 183
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 148 VRVQGAHPSGPGQ*C 192
+R QGAHP+GPG C
Sbjct: 159 LRPQGAHPAGPGHLC 173
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,827,545
Number of Sequences: 237096
Number of extensions: 909374
Number of successful extensions: 1900
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1886
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1400773776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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