Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0401
         (308 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   4.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   5.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   5.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    20   7.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    20   7.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   7.8  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +2

Query: 158 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSA 265
           K P++   + D+ + M    RQP+ +   A  + +A
Sbjct: 59  KLPVKAITLPDLSIPMQLGRRQPFSLFIPAHRKIAA 94


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 59  YFSEAIPLKYTLIAVIKTI 3
           Y+S+   L++ +I ++KT+
Sbjct: 135 YYSDRPGLEHIVIGIVKTV 153


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 59  YFSEAIPLKYTLIAVIKTI 3
           Y+S+   L++ +I ++KT+
Sbjct: 135 YYSDRPGLEHIVIGIVKTV 153


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 251 HQTSAESWGTGRAVDRI 301
           H+ SA+  G G   DR+
Sbjct: 299 HRNSAQQAGVGTIFDRV 315


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 251 HQTSAESWGTGRAVDRI 301
           H+ SA+  G G   DR+
Sbjct: 299 HRNSAQQAGVGTIFDRV 315


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 253 VTSLLAHAVGLPRVLGHRNVNIIDQ 179
           V  +L+H  G PR++   +    DQ
Sbjct: 330 VAFMLSHPFGTPRIMSSFDFQSKDQ 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,127
Number of Sequences: 438
Number of extensions: 1293
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)