Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0395
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 83 1e-16
01_01_0682 - 5244805-5244919,5246468-5246613,5246813-5246994,524... 70 1e-12
03_02_0758 + 10954268-10954841,10955988-10957145,10957176-109572... 63 1e-10
08_01_0353 - 3107628-3107774,3108177-3108213,3108248-3109164,310... 50 1e-06
08_01_0397 - 3509186-3510291,3510322-3512335 50 1e-06
01_05_0292 + 20518668-20519090,20519213-20519281,20520204-205204... 46 1e-05
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 44 6e-05
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 43 1e-04
02_01_0765 - 5694535-5694644,5695039-5696550,5697229-5697390,569... 35 0.045
06_03_0674 + 23422004-23422552,23423295-23423369,23424360-234244... 33 0.14
03_05_0865 - 28365430-28367640 33 0.14
07_03_1500 + 27001842-27002058,27002144-27002283,27002458-270025... 31 0.73
07_01_1218 - 11633829-11634628,11634713-11635050,11635349-116354... 28 5.1
04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093 28 5.1
01_04_0011 + 15067536-15068236,15068283-15068898 28 5.1
12_01_0191 + 1413287-1413346,1413504-1413632,1416819-1416998,141... 27 8.9
04_01_0618 - 8094991-8097288 27 8.9
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 83.4 bits (197), Expect = 1e-16
Identities = 38/79 (48%), Positives = 48/79 (60%)
Frame = +2
Query: 242 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 421
P D SL PF KNFY P V S +V +YR ++TV G +V P++YF+EANFPD
Sbjct: 106 PKPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPD 165
Query: 422 YVQQGVKTMGYKEPTPIAS 478
Y Q + G+ EPTPI S
Sbjct: 166 YCMQAIAKSGFVEPTPIQS 184
>01_01_0682 -
5244805-5244919,5246468-5246613,5246813-5246994,
5247069-5247295,5247382-5247467,5247564-5247656,
5247964-5248118,5248407-5248490,5248589-5248768,
5249587-5249828,5249927-5249982
Length = 521
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/76 (43%), Positives = 43/76 (56%)
Frame = +2
Query: 251 DSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQ 430
D L F KNFY P+V + EVE YR E+TV G +V P++ F + FP+YV
Sbjct: 44 DLDGLPRFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVL 103
Query: 431 QGVKTMGYKEPTPIAS 478
Q + G+ EPTPI S
Sbjct: 104 QEITKAGFVEPTPIQS 119
>03_02_0758 +
10954268-10954841,10955988-10957145,10957176-10957216,
10957412-10957448,10957534-10957954,10958201-10958234
Length = 754
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/81 (34%), Positives = 44/81 (54%)
Frame = +2
Query: 245 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDY 424
D ++ +PFNK+FY+ P+V S EV +Y + + VSG +V PI+ F + FP
Sbjct: 170 DHSTIEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQ 229
Query: 425 VQQGVKTMGYKEPTPIASSRL 487
+ + GY++PT I L
Sbjct: 230 LMNAIAKQGYEKPTTIQCQAL 250
>08_01_0353 -
3107628-3107774,3108177-3108213,3108248-3109164,
3109210-3110952
Length = 947
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +2
Query: 245 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDY 424
D + QPF KN Y + + EV YR N E+ V G +V PI+ + ++
Sbjct: 236 DHSKIEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTWVQSGLTSK 295
Query: 425 VQQGVKTMGYKEPTPIASSRL 487
+ +K +G+++P PI + L
Sbjct: 296 LLDTIKKLGFEKPMPIQAQAL 316
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 49.6 bits (113), Expect = 1e-06
Identities = 24/81 (29%), Positives = 40/81 (49%)
Frame = +2
Query: 245 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDY 424
D + QPF KNFY + K + EV YR E+ V G +V PI+ + ++
Sbjct: 375 DHSKIDYQPFRKNFYIEVKDITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSK 434
Query: 425 VQQGVKTMGYKEPTPIASSRL 487
+ +K +G+++P I + L
Sbjct: 435 LLDTIKKLGFEKPMSIQAQAL 455
>01_05_0292 +
20518668-20519090,20519213-20519281,20520204-20520473,
20520734-20521084,20521251-20521528,20522755-20523099,
20523346-20523911,20525155-20525528
Length = 891
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 332 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPI 472
E YR+ HE+TV G V PI FE FP + + ++ G+ PTPI
Sbjct: 130 EAYRHRHEITVVGDNVPAPITSFETGGFPPEILKEIQRAGFSSPTPI 176
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 260 SLQPFNKNFYDPH-PTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 436
S++P ++ F P+ P++ + YR +HEVT G V P FE FP + Q
Sbjct: 564 SMRPPSRMFAPPNFPSIAS-----ADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQE 618
Query: 437 VKTMGYKEPTPI 472
+ G+ PTPI
Sbjct: 619 IHAAGFLNPTPI 630
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +2
Query: 332 EEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPI 472
E YR HE+T+ G E P F+ FP + + V+ G+ PTPI
Sbjct: 160 EAYRAKHEITIVGNEAPAPFMTFQSTGFPPEILREVQQAGFSAPTPI 206
>02_01_0765 -
5694535-5694644,5695039-5696550,5697229-5697390,
5698015-5698057
Length = 608
Score = 34.7 bits (76), Expect = 0.045
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 326 EVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIASSRLVR*LC 502
++ R+ ++ V G +V +PI F + P+ + ++ GY PTP+ + +C
Sbjct: 160 QIASLRSKLDICVKGEDVPDPIMCFSSSGLPEKLVLNLEAAGYVMPTPVQMQVIPSSIC 218
>06_03_0674 +
23422004-23422552,23423295-23423369,23424360-23424443,
23424749-23424991,23425348-23425515,23425608-23425727,
23426372-23427016
Length = 627
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 356 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPI 472
V VSG +V P FE A + V + V GY+ PTP+
Sbjct: 72 VEVSGEDVPPPADGFEAAGLVEAVLRNVARCGYESPTPV 110
>03_05_0865 - 28365430-28367640
Length = 736
Score = 33.1 bits (72), Expect = 0.14
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 338 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPI 472
+R + ++ G +V P++ + E+ + + V+ GYKEP+PI
Sbjct: 297 FREDFNISYKGSKVPRPMRKWSESKLGTELLRAVEKAGYKEPSPI 341
>07_03_1500 +
27001842-27002058,27002144-27002283,27002458-27002549,
27002680-27002776,27002871-27002951,27003031-27003263,
27003876-27004070,27004149-27004239,27004324-27004446,
27004542-27004692,27005060-27005262
Length = 540
Score = 30.7 bits (66), Expect = 0.73
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 341 RNNHEVTVSGVEVHNPIQYFEEA----NFPDYVQQGVKTMGYKEPTPI 472
R ++ +SG V P++ FEE Y+ + +G++EPTPI
Sbjct: 125 RKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPI 172
>07_01_1218 -
11633829-11634628,11634713-11635050,11635349-11635445,
11635482-11635725,11636114-11636122
Length = 495
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 275 NKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQY 397
NK+ Y+ ++ R+P + E+Y NN ++ EV P+++
Sbjct: 137 NKHKYNELGNIIPRTPTDQEKYGNNSSYILNIEEVILPLEF 177
>04_01_0520 - 6852701-6855028,6855050-6855835,6856085-6856093
Length = 1040
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 317 SPYEVEEYRNNHEVTVSGVEVHN 385
SP +EE N E+ V GV++HN
Sbjct: 431 SPQMIEEMNNVRELNVKGVKLHN 453
>01_04_0011 + 15067536-15068236,15068283-15068898
Length = 438
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 243 QIGILFHSNLSTKTFMIHILQFSKDHHMKSKSTE 344
++ ++ NLS K + +L+ +K+ H+ SKST+
Sbjct: 188 EVVVIVGCNLSGKEVALELLRVAKEVHLSSKSTK 221
>12_01_0191 +
1413287-1413346,1413504-1413632,1416819-1416998,
1417747-1417938,1418533-1418673,1418785-1418912,
1419088-1419262,1419664-1419852,1420628-1420749,
1420829-1420874
Length = 453
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/65 (27%), Positives = 32/65 (49%)
Frame = +3
Query: 84 TGIIAVETVVPNLEEATNSAIIRLDLATVAVDLEDLEDLVGKKNSLEVRTCVAQIGILFH 263
T I+ + +P+L + + L +A+ + + E GK N EV C+ +LFH
Sbjct: 189 TTILENQFGLPSLVDKATANTTNL-VASASSSMTPDEIGEGKNNPDEVFVCICGEKLLFH 247
Query: 264 SNLST 278
+N +T
Sbjct: 248 TNFNT 252
>04_01_0618 - 8094991-8097288
Length = 765
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 400 KVLNRIMNLNATYSYLVIISVLFD 329
K+L +M +N YSY VI + LFD
Sbjct: 327 KILQFLMAINTNYSYRVIRAGLFD 350
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,660,136
Number of Sequences: 37544
Number of extensions: 203753
Number of successful extensions: 491
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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