Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0394
(598 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 310 8e-85
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 308 2e-84
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 267 4e-72
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 218 2e-57
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 151 6e-37
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 103 8e-23
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 1e-13
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 29 2.2
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 2.9
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 2.9
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 29 2.9
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_42857| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 27 8.7
SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13) 27 8.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 310 bits (760), Expect = 8e-85
Identities = 151/198 (76%), Positives = 166/198 (83%)
Frame = +3
Query: 3 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRDHSVLCCVHRTPSVSSVDAAKNQVAMNPN 182
AVGIDLGTTYSCVGVFQHGKVEIIANDQGNR T + DAAKNQVAMNP
Sbjct: 6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIG-DAAKNQVAMNPE 64
Query: 183 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 362
NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSMVL
Sbjct: 65 NTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVL 124
Query: 363 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 542
TKMKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYG
Sbjct: 125 TKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYG 184
Query: 543 LDKKGTGERNVLIFDLGG 596
LDKK ERNVLI+DLGG
Sbjct: 185 LDKKVGVERNVLIYDLGG 202
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 308 bits (756), Expect = 2e-84
Identities = 150/198 (75%), Positives = 170/198 (85%)
Frame = +3
Query: 3 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRDHSVLCCVHRTPSVSSVDAAKNQVAMNPN 182
A+GIDLGTTYSCVGVFQ+GKVEIIANDQGNR T + DAAKNQVA+NP
Sbjct: 6 AIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVG-DAAKNQVALNPE 64
Query: 183 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 362
NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+SSMVL
Sbjct: 65 NTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVL 124
Query: 363 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 542
KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYG
Sbjct: 125 GKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYG 184
Query: 543 LDKKGTGERNVLIFDLGG 596
LDK +GE+NVLIFDLGG
Sbjct: 185 LDKSLSGEKNVLIFDLGG 202
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 267 bits (655), Expect = 4e-72
Identities = 130/197 (65%), Positives = 155/197 (78%)
Frame = +3
Query: 6 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRDHSVLCCVHRTPSVSSVDAAKNQVAMNPNN 185
+GIDLGTTYSCVGVF++G+VEIIANDQGNR D AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 186 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 365
T+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+MVLT
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823
Query: 366 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 545
KMKETAEAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+
Sbjct: 824 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGM 883
Query: 546 DKKGTGERNVLIFDLGG 596
DKK GE+N+L+FDLGG
Sbjct: 884 DKK-EGEKNILVFDLGG 899
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 218 bits (533), Expect = 2e-57
Identities = 120/184 (65%), Positives = 131/184 (71%), Gaps = 26/184 (14%)
Frame = +3
Query: 3 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRDH-SVLCCVHRTPSVSSVDAAKNQVAMNP 179
A+GIDLGTTYSCVGVFQHGKVEIIANDQGNR S + V DAAKNQVAMNP
Sbjct: 6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVG--DAAKNQVAMNP 63
Query: 180 NNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV---- 347
NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 64 TNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEA 123
Query: 348 ---------------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAT 464
SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQAT
Sbjct: 124 GRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQAT 183
Query: 465 KDAG 476
KDAG
Sbjct: 184 KDAG 187
Score = 147 bits (356), Expect = 7e-36
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +3
Query: 342 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 521
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 522 AAAIAYGLDKKGTGERNVLIFDLGG 596
AAAIAYGLDKK ERNVLIFDLGG
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGG 295
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 151 bits (365), Expect = 6e-37
Identities = 89/201 (44%), Positives = 120/201 (59%), Gaps = 4/201 (1%)
Frame = +3
Query: 6 VGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRDHSVLCCVHRTPSVSSV-DAAKNQVAMN 176
+GIDLGTTYSCVG +Q G+++I +++ N D V V T V + A +Q +N
Sbjct: 34 IGIDLGTTYSCVGAYQAISGRIDIFSDE--NDDKVVPSLVAFTDKGVLVGEKALSQAEIN 91
Query: 177 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSS 353
P NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 354 MVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAI 533
V+ K++ AE L TV AV++VPA F+ QR AT A +++G+ VLR+INEPTAAA+
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAAL 211
Query: 534 AYGLDKKGTGERNVLIFDLGG 596
AYGL KK G NV++ DLGG
Sbjct: 212 AYGLHKK-EGVANVMVVDLGG 231
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 116 bits (280), Expect = 1e-26
Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Frame = +3
Query: 174 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 350
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 351 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA 530
+M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA +
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVS 237
Query: 531 IAYGLDKKG---TGERNVLIFDLG 593
+AYG+ K+ RNV+ D+G
Sbjct: 238 LAYGIYKQDLPTDKPRNVVFVDIG 261
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 103 bits (248), Expect = 8e-23
Identities = 63/118 (53%), Positives = 78/118 (66%), Gaps = 26/118 (22%)
Frame = +3
Query: 297 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 476
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 477 TISGLN------------------------VLRIINEPTAAAIAYGLDKK--GTGERN 572
TI+GL+ VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 62 TIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 73.3 bits (172), Expect = 1e-13
Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Frame = +3
Query: 291 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 470
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 471 AGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLG 593
A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMG 171
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 14/95 (14%)
Frame = +2
Query: 320 RQNLFPRGSQFHGAYENEGNCRSLSRQNCAECSY---HG----SRVLQ*LSKTSHKRCRY 478
R+++FP+G H +Y C L R S+ HG S L+ K + C +
Sbjct: 1366 RRHVFPKGHVAHRSYHVYSICALLRRYRLTHSSFLLHHGQTGNSGTLRSFCKFIMRECGW 1425
Query: 479 HLRLERSPN---HQ*T----HCCCDCLRS*QKGYW 562
+R HQ CCC C R + YW
Sbjct: 1426 RVRAGTDACVIFHQFDDAIRECCCLCCRGRRGKYW 1460
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 195 RILCCWGSSPPGSWRH 148
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 195 RILCCWGSSPPGSWRH 148
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Frame = +3
Query: 357 VLTKMKETAEAYLGKT----------VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 506
V K T+E Y+G T + NA +T+P YF + +K G G+ +
Sbjct: 994 VTRKDNNTSETYVGLTENSFKTRRNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--A 1051
Query: 507 INEPTAAAIAYGLDKKGTG 563
+++ I+Y LD+K TG
Sbjct: 1052 MSKERNQEISYKLDRKWTG 1070
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 385 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 206
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 205 RLASNIVL 182
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_42857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 144 PMRRSVSCERNIRRSGPCCP 85
PM+ +SC + I R+ P CP
Sbjct: 111 PMKACLSCHQQIHRNAPICP 130
>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/61 (18%), Positives = 28/61 (45%)
Frame = +3
Query: 81 DQGNRDHSVLCCVHRTPSVSSVDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHW 260
D+ + + ++ +H+ P++S V + + + F KR+ E+ +++ W
Sbjct: 228 DRDSWEENIFQNIHKRPNISQVRSLPRALQQQQDTPNFTIKRMYDSAREEFEKLEELREW 287
Query: 261 P 263
P
Sbjct: 288 P 288
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 335 PRGSQFHGAYENEGNCRSLSRQNCAECSY 421
PRG Q Y G+C S+S++NC + S+
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSF 1168
>SB_43817| Best HMM Match : WD40 (HMM E-Value=1e-13)
Length = 822
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = -1
Query: 364 VSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMS-ACTVASSNLRPMRRLASNI 188
VST+++T G +L+ T LG+ + T S S T+ S +L PMRR +
Sbjct: 751 VSTVDVTLDGLYILAGT--TTGNLGVLNASTRSYTTLMRSHTSTITSMDLDPMRRHMGTV 808
Query: 187 VLLGFIATWFL 155
G I W L
Sbjct: 809 SADGTIRIWDL 819
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,853,776
Number of Sequences: 59808
Number of extensions: 469168
Number of successful extensions: 1392
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1439498375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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