Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0393
         (470 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O77047 Cluster: Fly Fas-associated factor; n=4; Diptera...   116   3e-25
UniRef50_Q17DA0 Cluster: Fas-associated protein; n=4; Endopteryg...   113   2e-24
UniRef50_Q96CS3 Cluster: UBX domain-containing protein 8; n=30; ...    77   2e-13
UniRef50_A7S9M6 Cluster: Predicted protein; n=1; Nematostella ve...    59   6e-08
UniRef50_O82483 Cluster: T12H20.9 protein; n=12; Magnoliophyta|R...    49   5e-05
UniRef50_A2YE44 Cluster: Putative uncharacterized protein; n=3; ...    43   0.003
UniRef50_Q61QG1 Cluster: Putative uncharacterized protein CBG070...    37   0.26 
UniRef50_A7RJX7 Cluster: Predicted protein; n=1; Nematostella ve...    35   0.78 
UniRef50_A0ZL09 Cluster: Putative two-component sensor histidine...    33   3.2  
UniRef50_A0YNK7 Cluster: Putative uncharacterized protein; n=1; ...    33   4.2  
UniRef50_Q112M6 Cluster: Putative uncharacterized protein; n=1; ...    31   9.7  

>UniRef50_O77047 Cluster: Fly Fas-associated factor; n=4;
           Diptera|Rep: Fly Fas-associated factor - Drosophila
           melanogaster (Fruit fly)
          Length = 464

 Score =  116 bits (279), Expect = 3e-25
 Identities = 53/76 (69%), Positives = 65/76 (85%), Gaps = 2/76 (2%)
 Frame = +3

Query: 189 GLTQDQTDKILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQLNIREGRXSVFA--TEA 362
           GLT +QT+K+LQFQDLTGIEDM++CRDVL RHQWDLEVA QEQLNIREGR ++FA  T+ 
Sbjct: 5   GLTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNIREGRPTMFAASTDV 64

Query: 363 RAPTVVHDHIAQEVFT 410
           RAP V++D   Q+VF+
Sbjct: 65  RAPAVLNDRFLQQVFS 80


>UniRef50_Q17DA0 Cluster: Fas-associated protein; n=4;
           Endopterygota|Rep: Fas-associated protein - Aedes
           aegypti (Yellowfever mosquito)
          Length = 445

 Score =  113 bits (271), Expect = 2e-24
 Identities = 47/73 (64%), Positives = 62/73 (84%)
 Frame = +3

Query: 189 GLTQDQTDKILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQLNIREGRXSVFATEARA 368
           G++ +QT+K+LQFQD+TG++D+++CRD+L RHQWDLEVA QE LNIREGR S +ATE+RA
Sbjct: 5   GMSNEQTEKVLQFQDITGLDDINVCRDILIRHQWDLEVAFQEHLNIREGRPSAYATESRA 64

Query: 369 PTVVHDHIAQEVF 407
           P VV+D   Q VF
Sbjct: 65  PQVVNDRFLQHVF 77


>UniRef50_Q96CS3 Cluster: UBX domain-containing protein 8; n=30;
           Deuterostomia|Rep: UBX domain-containing protein 8 -
           Homo sapiens (Human)
          Length = 445

 Score = 77.0 bits (181), Expect = 2e-13
 Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = +3

Query: 192 LTQDQTDKILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQLNIREGRXSVFATEARAP 371
           LTQ+QT+K+LQFQDLTGIE M  CR  L++H W++E A+Q++LN +EG  SVF      P
Sbjct: 9   LTQEQTEKLLQFQDLTGIESMDQCRHTLEQHNWNIEAAVQDRLNEQEGVPSVFNPPPSRP 68

Query: 372 TVVH--DH 389
             V+  DH
Sbjct: 69  LQVNTADH 76


>UniRef50_A7S9M6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 459

 Score = 58.8 bits (136), Expect = 6e-08
 Identities = 22/49 (44%), Positives = 36/49 (73%)
 Frame = +3

Query: 204 QTDKILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQLNIREGRXSVF 350
           Q + ++QFQD+TGI+D+  CR VL+RH+W++E A+Q+  N  EG   ++
Sbjct: 12  QMEVLVQFQDITGIDDVEKCRAVLERHEWNIETAVQDTFNEAEGGLPIY 60


>UniRef50_O82483 Cluster: T12H20.9 protein; n=12; Magnoliophyta|Rep:
           T12H20.9 protein - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 466

 Score = 49.2 bits (112), Expect = 5e-05
 Identities = 24/63 (38%), Positives = 33/63 (52%)
 Frame = +3

Query: 201 DQTDKILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQLNIREGRXSVFATEARAPTVV 380
           D  DK+  FQ +TG+ED  +C ++LQ H WDLE+AI       +   S  A +       
Sbjct: 3   DTVDKLGYFQAITGLEDADLCTEILQAHGWDLELAI-SSFTSSDQDASSSAVDGGGNNRD 61

Query: 381 HDH 389
           HDH
Sbjct: 62  HDH 64


>UniRef50_A2YE44 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 234

 Score = 43.2 bits (97), Expect = 0.003
 Identities = 14/33 (42%), Positives = 24/33 (72%)
 Frame = +3

Query: 210 DKILQFQDLTGIEDMSICRDVLQRHQWDLEVAI 308
           DK++ FQ +TGI D ++C ++L  H WDL++ +
Sbjct: 7   DKVIYFQAVTGISDHNLCTEILAAHDWDLQLVV 39


>UniRef50_Q61QG1 Cluster: Putative uncharacterized protein CBG07030;
           n=1; Caenorhabditis briggsae|Rep: Putative
           uncharacterized protein CBG07030 - Caenorhabditis
           briggsae
          Length = 549

 Score = 36.7 bits (81), Expect = 0.26
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +3

Query: 186 LGLTQDQTDKILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQL 320
           L L  DQ +K+ QF D+T + D  +    L    W+LE AI+  L
Sbjct: 4   LDLEDDQREKLRQFTDITQLHDYDVAVGTLASLNWNLEQAIEAHL 48


>UniRef50_A7RJX7 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 127

 Score = 35.1 bits (77), Expect = 0.78
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 216 ILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQL 320
           +  FQ +TGIE++  C  +L  H WDL   +   L
Sbjct: 12  LANFQSITGIENLDECITLLDHHNWDLTACVNSVL 46


>UniRef50_A0ZL09 Cluster: Putative two-component sensor histidine
           kinase; n=2; Nostocaceae|Rep: Putative two-component
           sensor histidine kinase - Nodularia spumigena CCY 9414
          Length = 90

 Score = 33.1 bits (72), Expect = 3.2
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 8/52 (15%)
 Frame = +3

Query: 171 LEDNALGLTQDQTDKILQ-FQDLTGIED-------MSICRDVLQRHQWDLEV 302
           +EDN +G  Q   D+I Q FQ L G ++       ++ICR + +RH  ++ V
Sbjct: 19  VEDNGIGFAQQYVDRIFQIFQRLHGRQEYQGTGMGLAICRKIAERHHGNITV 70


>UniRef50_A0YNK7 Cluster: Putative uncharacterized protein; n=1;
           Lyngbya sp. PCC 8106|Rep: Putative uncharacterized
           protein - Lyngbya sp. PCC 8106
          Length = 563

 Score = 32.7 bits (71), Expect = 4.2
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +3

Query: 153 KSGPMDLEDNALGLTQD-QTDKILQFQDLTGIEDMS-ICRDVLQRHQWDLEVAI 308
           K GP     N   +  D +T   L+ + +TGIE  S IC+D+LQR  WDL + +
Sbjct: 152 KHGPHPGLHNDYAVCLDVKTTMKLEERFVTGIERRSAICQDLLQRQPWDLFLTV 205


>UniRef50_Q112M6 Cluster: Putative uncharacterized protein; n=1;
           Trichodesmium erythraeum IMS101|Rep: Putative
           uncharacterized protein - Trichodesmium erythraeum
           (strain IMS101)
          Length = 190

 Score = 31.5 bits (68), Expect = 9.7
 Identities = 18/69 (26%), Positives = 34/69 (49%)
 Frame = +3

Query: 195 TQDQTDKILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQLNIREGRXSVFATEARAPT 374
           T+ + D++LQ  + TG E+    +DV+ + Q +++V   E L  +  R  V         
Sbjct: 11  TEIRKDEVLQIHE-TGKEEKKQRQDVIVQRQNEVQVIHNEALEEKNQRQDVIVKRQNEVQ 69

Query: 375 VVHDHIAQE 401
           V+H+   +E
Sbjct: 70  VIHNEALEE 78


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 409,756,987
Number of Sequences: 1657284
Number of extensions: 7137592
Number of successful extensions: 14451
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14448
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)