Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0393
         (470 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051515-1|AAK92939.1|  464|Drosophila melanogaster GH16914p pro...   116   2e-26
AE014134-2967|AAF53697.1|  464|Drosophila melanogaster CG10372-P...   116   2e-26
AB013610-1|BAA33466.1|  464|Drosophila melanogaster Fly Fas-asso...   116   2e-26
AE014298-2205|AAF48502.2|  380|Drosophila melanogaster CG8944-PA...    29   4.2  
AE013599-1689|AAN16138.1|  443|Drosophila melanogaster CG32843-P...    27   9.7  

>AY051515-1|AAK92939.1|  464|Drosophila melanogaster GH16914p
           protein.
          Length = 464

 Score =  116 bits (279), Expect = 2e-26
 Identities = 53/76 (69%), Positives = 65/76 (85%), Gaps = 2/76 (2%)
 Frame = +3

Query: 189 GLTQDQTDKILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQLNIREGRXSVFA--TEA 362
           GLT +QT+K+LQFQDLTGIEDM++CRDVL RHQWDLEVA QEQLNIREGR ++FA  T+ 
Sbjct: 5   GLTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNIREGRPTMFAASTDV 64

Query: 363 RAPTVVHDHIAQEVFT 410
           RAP V++D   Q+VF+
Sbjct: 65  RAPAVLNDRFLQQVFS 80


>AE014134-2967|AAF53697.1|  464|Drosophila melanogaster CG10372-PA
           protein.
          Length = 464

 Score =  116 bits (279), Expect = 2e-26
 Identities = 53/76 (69%), Positives = 65/76 (85%), Gaps = 2/76 (2%)
 Frame = +3

Query: 189 GLTQDQTDKILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQLNIREGRXSVFA--TEA 362
           GLT +QT+K+LQFQDLTGIEDM++CRDVL RHQWDLEVA QEQLNIREGR ++FA  T+ 
Sbjct: 5   GLTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNIREGRPTMFAASTDV 64

Query: 363 RAPTVVHDHIAQEVFT 410
           RAP V++D   Q+VF+
Sbjct: 65  RAPAVLNDRFLQQVFS 80


>AB013610-1|BAA33466.1|  464|Drosophila melanogaster Fly
           Fas-associated factor (FFAF) protein.
          Length = 464

 Score =  116 bits (279), Expect = 2e-26
 Identities = 53/76 (69%), Positives = 65/76 (85%), Gaps = 2/76 (2%)
 Frame = +3

Query: 189 GLTQDQTDKILQFQDLTGIEDMSICRDVLQRHQWDLEVAIQEQLNIREGRXSVFA--TEA 362
           GLT +QT+K+LQFQDLTGIEDM++CRDVL RHQWDLEVA QEQLNIREGR ++FA  T+ 
Sbjct: 5   GLTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNIREGRPTMFAASTDV 64

Query: 363 RAPTVVHDHIAQEVFT 410
           RAP V++D   Q+VF+
Sbjct: 65  RAPAVLNDRFLQQVFS 80


>AE014298-2205|AAF48502.2|  380|Drosophila melanogaster CG8944-PA,
           isoform A protein.
          Length = 380

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 428 SLWWFFSKNFLCNVVMYNSRCPSFCGKHRGPPFSNI 321
           +LW+F   +FL  V  YN +      K  G PF++I
Sbjct: 334 TLWYFKELHFLNEVYSYNDKMSDAVVKVSGSPFNSI 369


>AE013599-1689|AAN16138.1|  443|Drosophila melanogaster CG32843-PA
           protein.
          Length = 443

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -1

Query: 416 FFSKNFLCN---VVMYNSRCPSFCGKHRGPPFSNIQLFLNCYL*IPLVSLQNIST 261
           F +  FLCN   VV+     P+      GP  + +Q F    L +PL+ LQ I T
Sbjct: 307 FLNLLFLCNIVRVVLLKLNAPASIQGSCGPSRTVLQAFRATLLLVPLLGLQYILT 361


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,370,971
Number of Sequences: 53049
Number of extensions: 338144
Number of successful extensions: 592
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)