Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0392
         (639 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            27   0.50 
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   1.5  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   6.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.2  
AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    23   6.2  

>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 27.1 bits (57), Expect = 0.50
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 585  WDESKGSWGYSSRWGSLYSMVLPGAA 508
            WD SK  W     W +L+   L GA+
Sbjct: 2780 WDPSKWDWSQPGTWNALFIGSLTGAS 2805


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = -3

Query: 256 LYATSSIGATSRPHTLQRSRVYPQEEISKNGISFILEYFVLYVY*NTNASIRK 98
           +Y++ S+  + + HT      +        G  FI    ++Y+Y  TN ++RK
Sbjct: 133 VYSSKSLRKSPQAHTTDDESSFDNLNNDMKGHDFIDN--IMYIYYGTNGNLRK 183


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +2

Query: 470 LAAYNASVARCTXAAPGSTM--EYRLPHR 550
           L ++ +S A C+ AAP ST   ++ L HR
Sbjct: 351 LTSHRSSSANCSSAAPKSTAHPDHFLDHR 379


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +2

Query: 482 NASVARCTXAAP-GSTMEYRLPHR 550
           N S    T ++P GS MEY LPH+
Sbjct: 210 NLSSNGSTLSSPSGSRMEYLLPHQ 233


>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
           serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = -2

Query: 134 VCLLEYQCVD-----T*ARFIIIRNKLFIINEYLRQ 42
           +C+ +YQC D     + A  I IR+ L   N++L Q
Sbjct: 17  ICVYQYQCTDGVVSHSGANIIDIRHPLDDCNDHLMQ 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,489
Number of Sequences: 2352
Number of extensions: 11499
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)