Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0391
         (462 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    27   0.085
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   9.7  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    20   9.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 27.1 bits (57), Expect = 0.085
 Identities = 11/38 (28%), Positives = 24/38 (63%)
 Frame = -2

Query: 119 LIFCSYLLHS*VFITTQ*GVVVIIWVSLIIQYFVHASH 6
           LI+ SY   + +FIT +   V+++W+S  + + +H ++
Sbjct: 122 LIWKSYK-RTQIFITCELFFVILLWISFFLNFMLHCNN 158


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 66   GRSSHHLGFFDNSIFRPRQSL 4
            G   HH+    N +F P Q++
Sbjct: 939  GERKHHMPCPSNLVFNPDQNV 959


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -1

Query: 231 HAWMDHTESPWLPLTSETSF 172
           H   +HT  PW+ +    +F
Sbjct: 198 HQQTNHTFYPWMAIADSMTF 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,378
Number of Sequences: 336
Number of extensions: 2181
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)