Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0391
(462 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29) 91 4e-19
SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37) 71 5e-13
SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40) 69 2e-12
SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0) 68 4e-12
SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 6e-12
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 66 2e-11
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 2e-10
SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 61 5e-10
SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37) 60 9e-10
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 58 4e-09
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 58 5e-09
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 6e-09
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 57 6e-09
SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 56 1e-08
SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29) 56 2e-08
SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 3e-08
SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 6e-08
SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-07
SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33) 51 4e-07
SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30) 46 1e-05
SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 1e-05
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 42 2e-04
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 4e-04
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26) 36 0.022
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.028
SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007) 34 0.066
SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24) 32 0.27
SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_40474| Best HMM Match : IF3_C (HMM E-Value=7.7) 31 0.61
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.61
SB_59668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_55091| Best HMM Match : DUF1502 (HMM E-Value=1.8) 28 3.3
SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39) 28 4.3
SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056) 28 4.3
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012) 28 4.3
SB_184| Best HMM Match : PAN (HMM E-Value=4.1e-09) 27 5.7
SB_26611| Best HMM Match : tRNA_SAD (HMM E-Value=2.8) 27 5.7
SB_49628| Best HMM Match : CBM_5_12 (HMM E-Value=8.9) 27 7.6
SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10) 27 7.6
SB_41113| Best HMM Match : VWA (HMM E-Value=1.8e-21) 27 10.0
SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
SB_2428| Best HMM Match : ShTK (HMM E-Value=4.2e-21) 27 10.0
SB_40872| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
SB_33097| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
>SB_47290| Best HMM Match : Ank (HMM E-Value=5.4e-29)
Length = 445
Score = 91.1 bits (216), Expect = 4e-19
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +3
Query: 51 DDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKR 230
+D+Y+LL C E +T EQI E+K A + HPDK + ++ F +LK+A+++LCD R
Sbjct: 287 EDFYSLLDCGEYATNEQINTEFKKKAKEWHPDKKRNDTDSHEYFARLKKARDVLCDEKMR 346
Query: 231 ALYDKWRRSGIAMGFKQWLGMKDHVQQSMHWS-KPNTK 341
A YD WR IA+ F+ W+ ++ S+HW+ KP ++
Sbjct: 347 AKYDHWRHIQIAVPFEVWMSLEKAAHASVHWAPKPRSQ 384
>SB_43852| Best HMM Match : DnaJ (HMM E-Value=1.7e-37)
Length = 399
Score = 70.9 bits (166), Expect = 5e-13
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 233
DYY +LG ++T I EY+ L+L++HPDKN E AE+KF++ EA ++L DP KRA
Sbjct: 4 DYYDILGLTRSATDADIKKEYRKLSLKYHPDKNQ-EPSAEVKFRQAAEAYDVLSDPKKRA 62
Query: 234 LYDKWRRSGIAMG 272
+Y+++ G+ G
Sbjct: 63 IYNQFGEEGLKSG 75
>SB_3383| Best HMM Match : DnaJ (HMM E-Value=3.8e-40)
Length = 250
Score = 68.9 bits (161), Expect = 2e-12
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 51 DDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKE-AEMKFQKLKEAKEILCDPSK 227
+DYY +LG +++ E + Y+ AL+ HPDKN +E AE KF+KL EA E+L D K
Sbjct: 3 EDYYEVLGVPRSASEEDVKKAYRRQALRWHPDKNPTNREHAEEKFKKLSEAYEVLSDKEK 62
Query: 228 RALYDKWRRSGI 263
R +YDK+ + G+
Sbjct: 63 RDIYDKYGKEGL 74
>SB_20922| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 576
Score = 67.7 bits (158), Expect = 4e-12
Identities = 30/70 (42%), Positives = 49/70 (70%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 233
DYY +LG N++ +QI ++ +A+++HPDKN G K+AE KF+++ EA E+L D +KR
Sbjct: 26 DYYQILGVPRNASDKQIKKAFRKMAVKYHPDKNKG-KDAEEKFREVAEAYEVLSDENKRR 84
Query: 234 LYDKWRRSGI 263
YD++ G+
Sbjct: 85 QYDQFGEEGL 94
>SB_41006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 67.3 bits (157), Expect = 6e-12
Identities = 29/66 (43%), Positives = 45/66 (68%)
Frame = +3
Query: 48 DDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSK 227
+ +YY +LG + N+T + I Y+ LAL++HPDKN G +E F+++ EA E+LCDP +
Sbjct: 2 ESNYYEVLGVERNATTDDIRRAYRRLALKYHPDKNAGTEE---NFKEVSEAYEVLCDPQQ 58
Query: 228 RALYDK 245
R +DK
Sbjct: 59 RERFDK 64
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/70 (41%), Positives = 46/70 (65%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 233
DYYA+L D+ ++ + I Y+ AL++HPDKN AE KF+++ EA E+L DP K+
Sbjct: 4 DYYAVLNVDKAASADDIKKAYRKQALKYHPDKNK-SPGAEEKFKEISEAYEVLSDPKKKE 62
Query: 234 LYDKWRRSGI 263
+YD++ G+
Sbjct: 63 IYDQYGEEGL 72
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 62.1 bits (144), Expect = 2e-10
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGE--KEAEMKFQKLKEAKEILCDPSK 227
DYY +LG N +IT Y+ LA++ HPD GE K+AE F + AKE+L DP K
Sbjct: 208 DYYKILGLKRNCNKREITKAYRKLAVKWHPDNYKGEDKKKAEKMFIDIAAAKEVLTDPEK 267
Query: 228 RALYD 242
RA YD
Sbjct: 268 RAKYD 272
>SB_39063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/73 (36%), Positives = 48/73 (65%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 233
+YY +LG ++++ +++ YK A ++HPDKN + AE KF+++ EA E+L DP KR
Sbjct: 4 NYYDILGVKKDASDQELKKAYKKQAFKYHPDKNK-DPGAEEKFKEIAEAYEVLSDPQKRE 62
Query: 234 LYDKWRRSGIAMG 272
++D++ G+ G
Sbjct: 63 IFDQYGEEGLKGG 75
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 60.9 bits (141), Expect = 5e-10
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = +3
Query: 21 EILNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEA 200
E+ + D++Y +LG + +T +I Y+ ++LQ HPD+N E +AE+KF+KL
Sbjct: 2472 ELFDIVEEVKDNFYQVLGVETTATQAEIRRAYRRISLQLHPDRNK-EDDAELKFRKLVAV 2530
Query: 201 KEILCDPSKRALYDKWRRSGI 263
E+L D KR YD R G+
Sbjct: 2531 AEVLKDEDKRKRYDTILRDGM 2551
>SB_293| Best HMM Match : DnaJ (HMM E-Value=7.6e-37)
Length = 238
Score = 60.1 bits (139), Expect = 9e-10
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 233
D+YA+LG +++ QI Y+ LA++ HPDKN + +A+ KF + A E+L D +R
Sbjct: 25 DFYAILGVPRDASKNQIKRAYRKLAMKLHPDKNKDDPKAQEKFHDIGAAYEVLADDDQRK 84
Query: 234 LYDKWRRSGI 263
+YD+ G+
Sbjct: 85 IYDQRGEEGL 94
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 58.0 bits (134), Expect = 4e-09
Identities = 33/84 (39%), Positives = 44/84 (52%)
Frame = +3
Query: 48 DDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSK 227
D Y LLG +N++ I Y+ LA + HPDKN E KF+ + A EIL DP K
Sbjct: 3 DTRLYDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTGE---KFKDITFAYEILSDPEK 59
Query: 228 RALYDKWRRSGIAMGFKQWLGMKD 299
R LYD++ G+ G G +D
Sbjct: 60 RELYDRYGEKGLREGAGGGAGFED 83
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 57.6 bits (133), Expect = 5e-09
Identities = 27/70 (38%), Positives = 43/70 (61%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 233
+YYA+LG N++ + I Y+ AL HPDKN AE KF+++ EA ++L DP +R
Sbjct: 4 NYYAILGVPRNASDDDIKKAYRRQALIFHPDKNK-NSGAEEKFKEISEAYKVLTDPRQRD 62
Query: 234 LYDKWRRSGI 263
++D + G+
Sbjct: 63 IFDMYGEEGL 72
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 57.6 bits (133), Expect = 5e-09
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 233
DYY +LG N+ ++I Y LA ++HPD N +K A KFQ++ EA E+L D KR
Sbjct: 59 DYYKILGVPPNANQKEIKKAYFELAKKYHPDTNK-DKSASEKFQEVSEAYEVLSDDGKRK 117
Query: 234 LYDKW 248
YD +
Sbjct: 118 AYDSF 122
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 57.2 bits (132), Expect = 6e-09
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +3
Query: 27 LNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDG-----EKEAEMKFQKL 191
L +++ DYY +L + ++ ++I YK AL+HHPD++ G +K AE +F+++
Sbjct: 150 LELKKSKRKDYYKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEV 209
Query: 192 KEAKEILCDPSKRALYD 242
EA IL DP K+ YD
Sbjct: 210 NEAYSILSDPKKKRRYD 226
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 57.2 bits (132), Expect = 6e-09
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Frame = +3
Query: 27 LNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDG-----EKEAEMKFQKL 191
L +++ DYY +L + ++ ++I YK AL+HHPD++ G +K AE +F+++
Sbjct: 150 LELKKSKRKDYYKILNISKTASEDEIKKAYKKEALKHHPDRHSGASDEQKKIAEKQFKEV 209
Query: 192 KEAKEILCDPSKRALYD 242
EA IL DP K+ YD
Sbjct: 210 NEAYSILSDPKKKRRYD 226
>SB_16146| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 79
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/75 (41%), Positives = 41/75 (54%)
Frame = +3
Query: 48 DDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSK 227
D Y LLG +N++ I Y+ LA + HPDKN E KF+ + A EIL DP K
Sbjct: 3 DTRLYDLLGVPQNASDNDIKKAYRKLAKELHPDKNPDTGE---KFKDITFAYEILSDPEK 59
Query: 228 RALYDKWRRSGIAMG 272
R LYD++ G+ G
Sbjct: 60 RELYDRYGEKGLREG 74
>SB_37512| Best HMM Match : DnaJ (HMM E-Value=1.3e-29)
Length = 291
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +3
Query: 51 DDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKR 230
++YY LG ++ST ++I Y+ AL+ HPDKN +A F KL +A E+L DP R
Sbjct: 6 ENYYDTLGVHKDSTEKEILKAYRKKALKCHPDKNPDNPKASELFHKLSKALEVLTDPKAR 65
Query: 231 ALYD 242
A ++
Sbjct: 66 AAFN 69
>SB_2261| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 572
Score = 54.8 bits (126), Expect = 3e-08
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +3
Query: 57 YYALLGCDENSTVEQITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEILCDPSKRA 233
+Y +LG + + + Y+ LAL+ HPDKN D +E+ F+++++A ++L DP +RA
Sbjct: 5 HYEVLGVERDVDDSALKKTYRKLALKWHPDKNLDNAEESTRVFREIQQAYDVLSDPQERA 64
Query: 234 LYDKWR 251
YDK R
Sbjct: 65 FYDKHR 70
>SB_49296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 966
Score = 54.0 bits (124), Expect = 6e-08
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 57 YYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRAL 236
YY +L +T +I Y+ LAL++HPDKN E + +F+++ +A E+L D KR +
Sbjct: 66 YYDILNVPPTATATEIKKSYRKLALKYHPDKNPDEGD---RFKQISQAYEVLSDEKKRKI 122
Query: 237 YDKWRRSGIAMG 272
YD+ I G
Sbjct: 123 YDEGGEDAIKGG 134
>SB_2842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 52.0 bits (119), Expect = 2e-07
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Frame = +3
Query: 60 YALLGCDENSTVEQITAEYKILALQHHPDKND-GEKE-AEMKFQKLKEAKEILCDPSKRA 233
Y +LG + ++ +I Y+ ++LQ HPD+ D GEKE A KFQ L ++ IL D KRA
Sbjct: 17 YDVLGVSKTASESEIKRAYRKISLQVHPDRADKGEKEKATRKFQALSKSYCILSDKEKRA 76
Query: 234 LYDK 245
+YD+
Sbjct: 77 IYDE 80
>SB_16477| Best HMM Match : DnaJ (HMM E-Value=8.1e-33)
Length = 138
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEILCD 218
DYY +L +++ + I Y+ LAL+ HPDKN ++EAE KF+++ EA E+L D
Sbjct: 3 DYYDILEVPRSASEQDIKKSYRKLALKWHPDKNPQNKEEAERKFKEISEAYEVLSD 58
>SB_6887| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 49.6 bits (113), Expect = 1e-06
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = +3
Query: 60 YALLGCDENSTVEQITAEYKILALQHHPDKN-DGEKEAEMKFQKLKEAKEILCD-PSKRA 233
Y +LG E++T E+I YK LA++ HPD++ D ++EA+ F +++EA EIL +KRA
Sbjct: 796 YRVLGLTEDATQEEIKKRYKKLAMKWHPDRHRDNKEEAQKHFMEIQEAYEILSKLKTKRA 855
>SB_34242| Best HMM Match : DnaJ (HMM E-Value=9.2e-30)
Length = 238
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 233
+YY +LG ++ +I Y L+++HHPD++ G + FQ++ EA +L + R
Sbjct: 72 NYYNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRK 131
Query: 234 LYDK 245
YD+
Sbjct: 132 QYDR 135
>SB_11933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/64 (31%), Positives = 36/64 (56%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRA 233
+YY +LG ++ +I Y L+++HHPD++ G + FQ++ EA +L + R
Sbjct: 72 NYYNVLGVSPKASQSKIKDAYYKLSMKHHPDRHQGSDKKHEVFQEIAEAYSVLGNLESRK 131
Query: 234 LYDK 245
YD+
Sbjct: 132 QYDR 135
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 41.9 bits (94), Expect = 2e-04
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 12 GVDEILNYQRN-PDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQK 188
G +I + R+ + D YA+L D ++V +I +Y+ L+ ++HPDK G+ KF +
Sbjct: 1233 GAYKISQFDRDFAEYDPYAVLEIDRGASVAEIRRQYRSLSKKYHPDKETGDPR---KFMR 1289
Query: 189 LKEAKEILCDPSK 227
+ +A E + D +K
Sbjct: 1290 IAKAYEAVSDFNK 1302
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 34.7 bits (76), Expect(2) = 4e-04
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 54 DYYALLGCDENSTVEQITAEYKILALQHHPDKN-DGEKE 167
DYYA+L + + +++ A Y+ L + +HPDK+ D EK+
Sbjct: 131 DYYAVLAVRKEANEDELKAAYRRLCVLYHPDKHTDPEKK 169
Score = 25.8 bits (54), Expect(2) = 4e-04
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 180 FQKLKEAKEILCDPSKRALY 239
F K+++A E+L DP +A+Y
Sbjct: 202 FSKVQKAYEVLSDPETKAIY 221
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/47 (44%), Positives = 28/47 (59%)
Frame = +3
Query: 51 DDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKL 191
+DYY L G ++T ++I +K LAL+ HPDKN K MK KL
Sbjct: 27 EDYYELFGISRDATSKEIRKAFKKLALRLHPDKN---KVCMMKILKL 70
>SB_58160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 35.5 bits (78), Expect = 0.022
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = +3
Query: 39 RNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCD 218
R ++Y +L ++++ +I + + + HPD N + ++ F K+ EA L
Sbjct: 3 RQKKKNFYEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSS 62
Query: 219 PSKRALYDKWRRSGIAMGFK 278
++R YD S A ++
Sbjct: 63 SARRQQYDARLNSSFASTYR 82
>SB_45438| Best HMM Match : DnaJ (HMM E-Value=4.4e-26)
Length = 211
Score = 35.5 bits (78), Expect = 0.022
Identities = 18/80 (22%), Positives = 37/80 (46%)
Frame = +3
Query: 39 RNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCD 218
R ++Y +L ++++ +I + + + HPD N + ++ F K+ EA L
Sbjct: 64 RQKKKNFYEILDVPKDASQTEIKSAFIKKTKEFHPDVNPDDPDSHKAFIKVSEAYTTLSS 123
Query: 219 PSKRALYDKWRRSGIAMGFK 278
++R YD S A ++
Sbjct: 124 SARRQQYDARLNSSFASTYR 143
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 35.1 bits (77), Expect = 0.028
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 21 EILNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKN--DGEKEAEMKFQKLK 194
E++ +N D +Y LG + +T + I YK LA+ HPDK+ G +EA L
Sbjct: 133 EVIQRLKNAKD-HYERLGIQQGATKDDINRAYKKLAVLIHPDKSVAPGSEEAFKALSSLN 191
Query: 195 EAKEILCDPSKRALY 239
+ PS ++ Y
Sbjct: 192 YGQMATGYPSIQSRY 206
>SB_17567| Best HMM Match : DnaJ (HMM E-Value=0.0007)
Length = 831
Score = 33.9 bits (74), Expect = 0.066
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +3
Query: 9 TGVDEILNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDK 149
TG D IL D Y++LG ++ + I +Y+ LA+ HPDK
Sbjct: 785 TGNDAILQMLSRRHGDPYSILGVPPEASDDDIKRQYRKLAVLIHPDK 831
>SB_2302| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +3
Query: 36 QRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILC 215
+RN ++Y ++ +T +I + Y L+ +HPD N EA +F +L A L
Sbjct: 45 RRNNPKNHYDVMKLLPTATQREIKSAYYELSRIYHPDLN-SSAEARERFAELTLAYNTLS 103
Query: 216 DPSKRALYDK 245
R YDK
Sbjct: 104 RLETRREYDK 113
>SB_13439| Best HMM Match : DnaJ (HMM E-Value=5.9e-24)
Length = 565
Score = 31.9 bits (69), Expect = 0.27
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +3
Query: 36 QRNPDDDYYALLGCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILC 215
+RN ++Y ++ +T +I + Y L+ +HPD N EA +F +L A L
Sbjct: 192 RRNNPKNHYDVMKLLPTATQREIKSAYYELSRIYHPDLN-SSAEARERFAELTLAYNTLS 250
Query: 216 DPSKRALYDK 245
R YDK
Sbjct: 251 RLETRREYDK 260
>SB_5461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1766
Score = 31.1 bits (67), Expect = 0.46
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = -1
Query: 264 LYHYDATCHTEHAWMDHTESPWL-PLTSETSFQLLFHHRFCQGGVAGQVSYILQLFAPQL 88
LY + T+ ++D + W P TSE S L + VS +P+
Sbjct: 1476 LYAHGYDRPTDLNFLDAIQHNWSSPQTSEDSLWLALERGVSTDAIEPDVSDYQYSLSPEH 1535
Query: 87 SFHHNPVGRSSH-HLGFFDNSIFRPR 13
++ H+PV +H H G + + R R
Sbjct: 1536 TYKHSPVDIRAHGHQGLYSENHVRER 1561
>SB_40474| Best HMM Match : IF3_C (HMM E-Value=7.7)
Length = 146
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 457 PQRPQRAAPPSEARRVAGLLGPRLDGPYGLLPSPSNMRSLVLGL 326
PQ+PQ A+P E R+ AG+ + D P PS S + GL
Sbjct: 60 PQKPQEASPLDEKRKRAGITPIKFDIPPEKKPSVSPQHAKRSGL 103
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -3
Query: 457 PQRPQRAAPPSEARRVAGLLGPRLDGPYGLLPSPSNMRSLVLGL 326
PQ+PQ A+P E R+ AG+ + D P PS S + GL
Sbjct: 457 PQKPQEASPLDEKRKRAGITPIKFDIPPEKKPSVSPQHAKRSGL 500
>SB_59668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = -3
Query: 391 RLDGPYGLLPSPSNMRSLVLGLDQCMDCCT*SFIPNHCLKPIAIPLRRHLSY 236
R YGL+P P+ R++V L C S I N+ L I I L RH Y
Sbjct: 361 RFCSAYGLVPIPAQHRTIVRFLIHLSTYCKYSTIANY-LSAINI-LHRHFGY 410
>SB_55091| Best HMM Match : DUF1502 (HMM E-Value=1.8)
Length = 315
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -1
Query: 243 CHTEHAWMD-HTESPWLPLTSETSFQLLFHHR-FCQGGVA 130
CH HAW + TE P + F+ R CQGG A
Sbjct: 95 CHNNHAWAELPTEPPAIASVHGLDFEAEREFRSLCQGGAA 134
>SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 27.9 bits (59), Expect = 4.3
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +3
Query: 18 DEILNYQRNPDDDYYALLGCDENSTVEQITAEYKILALQHH-PDKNDGEKEAEMKFQ--- 185
DEI Q+ +D L + + A+ K L+ + D ND KE E K Q
Sbjct: 778 DEIARLQK-ATNDLKEELEAQGKAKYDLEAAKEKTKKLESNLKDNNDKIKELEKKLQDVT 836
Query: 186 -KLKEAKEILCDPSKRAL 236
KLK+A+ D KRAL
Sbjct: 837 GKLKDAESKASDEEKRAL 854
>SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39)
Length = 1024
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = -3
Query: 376 YGLLPSPSNMRSLVLGLDQCMDCCT*SFIPNHCLKPIAIPLRRHLSY 236
YGL+P P+ R++V L C S I N+ L I I L RH Y
Sbjct: 767 YGLVPIPAQHRTIVRFLIHLSTYCKYSNITNY-LSAINI-LHRHFGY 811
>SB_33591| Best HMM Match : DnaJ (HMM E-Value=0.0056)
Length = 219
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 147 KNDGEKEAEMKFQKLKEAKEILCDPSKRALYD 242
K D ++ A KFQ + A E L DP +R YD
Sbjct: 72 KGDDKENAIKKFQLIATAYETLKDPEQRNDYD 103
>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 454 QRPQRAAPPSEARRVAGLLGPRLDGPYGLLPSPSN 350
++ R P ARR A GP ++ P G SPSN
Sbjct: 673 KKGSRVNSPIGARRRANSPGPSINSPRGRAESPSN 707
>SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)
Length = 1348
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +3
Query: 102 ITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDKWRRSGIAMGFKQ 281
IT + K L ++ KE+E F++ + A ++ C +K++ YD + A K+
Sbjct: 992 ITPKLKSLIASRQAALHNSGKESEA-FKQYRNAVQLECSVAKKSYYDNKVAALKATNIKR 1050
Query: 282 W 284
W
Sbjct: 1051 W 1051
>SB_184| Best HMM Match : PAN (HMM E-Value=4.1e-09)
Length = 720
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 246 WRRSGIAMGFKQWLGMKDHVQQSMHWSKPN 335
W R A+ K +GM DHV +W +PN
Sbjct: 500 WSRDHPALSCKAIIGM-DHVTDGYYWIQPN 528
>SB_26611| Best HMM Match : tRNA_SAD (HMM E-Value=2.8)
Length = 125
Score = 27.5 bits (58), Expect = 5.7
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +3
Query: 96 EQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEA-KEI--LCDPSKRALYDKWRRSGIA 266
E + AE AL+ +K E EAE K ++KEA +EI L + A+ W++ +
Sbjct: 34 EGLKAEKHCEALEARVEKIRKEVEAESKNLRVKEAGQEITRLIEDINAAVISAWKKEEMR 93
Query: 267 MGFKQWLGMKDHVQQSM 317
K+ + D+ ++M
Sbjct: 94 QTLKKVKKIVDNASKAM 110
>SB_49628| Best HMM Match : CBM_5_12 (HMM E-Value=8.9)
Length = 312
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = -1
Query: 243 CHTEHAWMD-HTESPWLPLTSETSFQLLFHHR-FCQGGVA 130
CH HAW + TE P + F+ R FCQG A
Sbjct: 166 CHNNHAWAELPTEPPAIASVHGLDFEAESELRSFCQGEAA 205
>SB_16586| Best HMM Match : DnaJ (HMM E-Value=4.9e-10)
Length = 141
Score = 27.1 bits (57), Expect = 7.6
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Frame = +3
Query: 36 QRNPD-DDYYALLGCDENSTVEQITAEYKILALQHHPDK-------NDGEKEAEMKFQKL 191
QR P +D +LG I Y+ L +HHPDK + + A+ K Q++
Sbjct: 68 QRGPTLEDACNVLGVKPTDDATTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEI 127
Query: 192 KEAKEIL 212
++A E++
Sbjct: 128 QQAYELI 134
>SB_41113| Best HMM Match : VWA (HMM E-Value=1.8e-21)
Length = 240
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 9 TGVDEILNYQRNPDDDYYALLGCDENSTVEQITAE 113
T E+ N+ +NP D ++ D ST E +TAE
Sbjct: 95 TSFYEMFNFTKNPGDQNILIVLVDGPSTDEVLTAE 129
>SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 26.6 bits (56), Expect = 10.0
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 90 TVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEILCDPSKRALYDKWRRSGI 263
T +Q+TA K+ + H+PD E+ A L+EA+ + ++RA Y K +R +
Sbjct: 75 THQQLTALEKVFSKTHYPDVEVREQLATS--TNLQEARIQVWFKNRRAKYRKDQRRSL 130
>SB_2428| Best HMM Match : ShTK (HMM E-Value=4.2e-21)
Length = 388
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +3
Query: 72 GCDENSTVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEIL 212
G D N IT K+L ++ D NDG Q + +A ++L
Sbjct: 91 GYDGNDRGSVITQANKVLVIEDDDDGNDGGPSDHSDKQVITQANKVL 137
>SB_40872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 87 STVEQITAEYKILALQHHPDKNDGEKEAEMKFQKLKEAKEI 209
STVE I +Y + +Q HP+KN E KEA +I
Sbjct: 68 STVEGI--KYPVYGVQWHPEKNQFEWSRREDIPHSKEAIQI 106
>SB_33097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 81 HHNPVGRSSHHLGFFDNSIFRPR 13
H V +S HLGFFD+ F PR
Sbjct: 55 HWLGVYETSDHLGFFDSFDFNPR 77
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,748,902
Number of Sequences: 59808
Number of extensions: 297503
Number of successful extensions: 948
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 931
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 945255773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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