Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0389
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical ... 30 1.0
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 29 3.1
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 28 4.0
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 28 4.0
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 28 4.0
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 4.0
AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical ... 28 4.0
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 27 7.0
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z35604-4|CAA84678.1| 442|Caenorhabditis elegans Hypothetical pr... 27 9.3
>AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical
protein W07E6.1 protein.
Length = 664
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 412 NAKFKEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEK 537
NAK + +E+EK K S+N ++ +E S ++ EEK
Sbjct: 511 NAKMSKQGVMEKEKEKAAQKSQNKKNKAEAEASESSDDEEEK 552
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 397 QFLKDNAKFKEDARL-EREKLKTKLDSENPQDANMSEPSNKAESSEEK 537
+ LK K++ +L +RE+LKT+ ++ + N + PS + E S K
Sbjct: 157 EILKIKKALKKEKKLRDRERLKTEKIDKSTETKNSTTPSTEKEKSSMK 204
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 400 FLKDNAKFKEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKAL 549
F+ D + E ER LKT+LD+E+ + A + E ++ + ++L+ +
Sbjct: 884 FISDYKQQMEKMDEERLVLKTRLDAESSERAEIFEERSRMAARRDELEGI 933
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
F20G4.3 protein.
Length = 2003
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 400 FLKDNAKFKEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKAL 549
F+ D + E ER LKT+LD+E+ + A + E ++ + ++L+ +
Sbjct: 884 FISDYKQQMEKMDEERLVLKTRLDAESSERAEIFEERSRMAARRDELEGI 933
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 400 FLKDNAKFKEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKAL 549
F+ D + E ER LKT+LD+E+ + A + E ++ + ++L+ +
Sbjct: 884 FISDYKQQMEKMDEERLVLKTRLDAESSERAEIFEERSRMAARRDELEGI 933
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +1
Query: 403 LKDNAKFKEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKAL 549
L+DN + EDARL E L SE+ + SNK +EEK + L
Sbjct: 1548 LEDNLQIAEDARLRLEVTNQALKSESDRAI-----SNKDVEAEEKRRGL 1591
>AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical
protein T01A4.3 protein.
Length = 710
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Frame = +1
Query: 406 KDNAKFKEDARLEREKLKTKLDSENPQ-------DAN-MSEPSNKAESSEEKLKALYGK 558
K A+ KE+ R+E+EK+K K + E + D N S + + E + E LK L GK
Sbjct: 32 KKEAEQKENLRIEQEKIKKKKEQERLEVPPTPFDDLNSQSAKTLRVEKAIENLKFLGGK 90
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 406 KDNAKFKEDARLERE-KLKTKLDSENPQDANMSEPSNKAESSEEK 537
K + KED ++E K + K ++EN + S+ K ES E+K
Sbjct: 80 KKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDK 124
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 144 LGREFHNCSDLAIETPNRLLEVKSEGIGI*K 236
L E NC L +E +RLL + SE I K
Sbjct: 162 LSEELENCQTLNVELEDRLLSITSESEAILK 192
>Z35604-4|CAA84678.1| 442|Caenorhabditis elegans Hypothetical
protein ZK1058.4 protein.
Length = 442
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 400 FLKDNAKFKEDARLEREKLKTKLDSENPQDANMSEPSNKAESSEEKLKA 546
FLK +F+++A R + KT+ + D + E + E+ E K +A
Sbjct: 381 FLKQTHQFRQEAAQARREEKTRERKQKLMDESDPERQKRLEAKELKREA 429
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.309 0.124 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,985,518
Number of Sequences: 27780
Number of extensions: 166762
Number of successful extensions: 514
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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