Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0388
(530 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0007 - 12074472-12074538,12074908-12075116,12077202-120774... 86 1e-17
03_05_0600 + 26021863-26022469,26022562-26022992 30 1.0
03_02_0205 + 6389343-6389609,6390418-6390486,6390662-6390757,639... 30 1.3
01_06_1226 - 35518981-35519295,35519876-35520745 30 1.3
01_07_0339 + 42848065-42848943,42849308-42849526 29 1.8
07_03_1347 + 25932185-25932748,25933151-25933755,25935797-259362... 29 2.3
05_01_0064 + 454786-455646,456537-456752 29 2.3
06_01_0707 + 5136210-5136584 29 3.1
05_04_0172 + 18718661-18718930,18719410-18720252,18720326-187203... 29 3.1
04_04_0169 + 23266110-23266439,23267208-23267288,23267399-232675... 29 3.1
02_05_0425 - 28845707-28846189,28846262-28846403,28846496-288469... 29 3.1
02_04_0635 - 24646603-24647337 29 3.1
09_04_0258 - 16175258-16176069,16176111-16176414 28 4.1
12_02_0749 - 22758317-22760407 28 5.4
09_04_0350 + 16899076-16900164 28 5.4
05_03_0638 - 16489181-16489210,16489486-16489806,16489878-16489919 28 5.4
01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309 28 5.4
07_03_0543 + 19272389-19272534,19273337-19273496,19273584-192737... 27 7.1
06_01_0218 + 1647624-1647757,1648044-1648112,1648493-1648549,164... 27 7.1
12_02_1081 + 25914180-25914371,25918121-25919104 27 9.4
08_01_1019 - 10290820-10291393,10293978-10294348 27 9.4
03_03_0025 + 13848450-13849420,13850921-13851131,13851327-138514... 27 9.4
03_02_0390 + 8056006-8057502 27 9.4
>11_04_0007 -
12074472-12074538,12074908-12075116,12077202-12077463,
12077547-12078043,12078651-12078719,12079258-12079363,
12080272-12080295,12081184-12081242,12081383-12081520
Length = 476
Score = 86.2 bits (204), Expect = 1e-17
Identities = 54/152 (35%), Positives = 77/152 (50%)
Frame = +3
Query: 51 EKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYRRY 230
EKP L GQRIKTRKR+ DP F DA+VQ GDL+ K ++S S L++ RY
Sbjct: 69 EKPTLGGQRIKTRKRNIAAPLDPASFSDAIVQIYLDNAGDLELVAKSIES--SDLNFSRY 126
Query: 231 GEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMRRYKYL 410
G+ F+V+ GG P G++ + E + + + + K +RR +L
Sbjct: 127 GDTFFEVVFIGGRTQP-GTIKPEEEGERHPYSVLDCAAQREAILPSVLYIQKTLRRRPFL 185
Query: 411 EKMFEEEMKKVLVYLKGXDPEQRXKLARMTAL 506
K E M+K L L+ + +R KLA TAL
Sbjct: 186 IKNLENVMRKFLQSLEFFEENERKKLAIFTAL 217
>03_05_0600 + 26021863-26022469,26022562-26022992
Length = 345
Score = 30.3 bits (65), Expect = 1.0
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2
Query: 301 PSIDTEPPGSSRPPA 257
PS+D EPPG S PPA
Sbjct: 220 PSLDNEPPGGSTPPA 234
>03_02_0205 +
6389343-6389609,6390418-6390486,6390662-6390757,
6391120-6391244,6391331-6391483,6392863-6392992,
6393122-6393282,6393660-6393702,6393869-6394042,
6394471-6394525,6394567-6394746,6396234-6396339,
6396448-6396506,6397419-6397541,6397825-6397919
Length = 611
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 72 QRIKTRKRDEKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYRRYGE 236
Q +KT R KY P+ +D G E ++ AAY+ L + Y R+GE
Sbjct: 77 QEVKTAYRTLARKYHPDMNKDP---GAEEKFKEISAAYEILSDEEKRSLYDRFGE 128
>01_06_1226 - 35518981-35519295,35519876-35520745
Length = 394
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -3
Query: 393 ASVSRIPVRNFAWCPYPHWRRRCRCWSWAIRRPSTPNRPAAAGR 262
A +S P F P+ RR+ RC W + + P AAG+
Sbjct: 194 AMMSGCPEVGFGEAPFAEGRRKARCLMWVSKVAAGEAAPPAAGK 237
>01_07_0339 + 42848065-42848943,42849308-42849526
Length = 365
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +3
Query: 267 LLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMRRYKYLEKMFEEEMKKVL 446
LLL G + P + + + ED+ + ++F K M +Y+ EE++++
Sbjct: 15 LLLLCGGACVAVAMPSELSIVGYSEEDLASHERLMELFEKFMAKYRKAYSSLEEKLRRFE 74
Query: 447 VY---LKGXDPEQRXKLARMTALWIG 515
V+ L D E + ++T W+G
Sbjct: 75 VFKDNLNHIDEENK----KITGYWLG 96
>07_03_1347 +
25932185-25932748,25933151-25933755,25935797-25936214,
25936433-25936555,25936775-25936989,25937157-25937412,
25937844-25938149,25938764-25938820,25939635-25939685
Length = 864
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 99 EKEKYDPNGFRDALVQGLERAGGDLDAAYKYLDSAGSKLDYRRYGE-VIFD 248
EK+K DP GF D V A G ++ + S+G DY YGE V+FD
Sbjct: 62 EKDKDDPEGFYDHKVAA---ADGRMEGI--FWASSGLGWDYVYYGEVVVFD 107
>05_01_0064 + 454786-455646,456537-456752
Length = 358
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/83 (21%), Positives = 39/83 (46%)
Frame = +3
Query: 267 LLLPGGSVSMDGESPKTNTCIFSANEDMDTMRNFEQVFVKLMRRYKYLEKMFEEEMKKVL 446
L L GG+ G S + + + ED+ + ++F K + +Y+ FEE++++
Sbjct: 14 LCLCGGAACAAGRSGGEFSIVGYSEEDLASHDRLIELFEKWVAKYRKAYASFEEKVRRFE 73
Query: 447 VYLKGXDPEQRXKLARMTALWIG 515
V+ + ++T+ W+G
Sbjct: 74 VFKDNLNHIDDIN-KKVTSYWLG 95
>06_01_0707 + 5136210-5136584
Length = 124
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3
Query: 222 GSRVLIRPSLGTCRLRRDRHRPAP 151
G RVL+ PS GT LRR RP P
Sbjct: 70 GGRVLLSPS-GTSSLRRSHRRPPP 92
>05_04_0172 +
18718661-18718930,18719410-18720252,18720326-18720354,
18720439-18720529,18720625-18720779,18721552-18721662,
18722579-18722645
Length = 521
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 410 GKNVRRGNEKGSGLLERLXSRTAHXAGAH 496
GK RRG +G GLL+RL S ++ H
Sbjct: 36 GKGQRRGRGRGRGLLQRLPSSSSSCFRGH 64
>04_04_0169 +
23266110-23266439,23267208-23267288,23267399-23267538,
23267815-23268070
Length = 268
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 510 STVQSCAPAXCAVRDXSLSSRPEPFSFPLRTFFPSTCTDASVSR 379
S + S + A AV D ++ PF +PL FP C A +SR
Sbjct: 54 SFLPSSSSAAAAVGDLAMGVVHHPFYYPLLLGFPLACLYAWLSR 97
>02_05_0425 -
28845707-28846189,28846262-28846403,28846496-28846971,
28848817-28848848,28849429-28849572,28849770-28849841,
28850281-28850296
Length = 454
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = +2
Query: 407 LGKNVRRGNE--KGSGLLERLXSRTAH 481
LG+ +RG E +GSGLLERL + H
Sbjct: 23 LGRYTKRGKEDLRGSGLLERLGNACVH 49
>02_04_0635 - 24646603-24647337
Length = 244
Score = 28.7 bits (61), Expect = 3.1
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +2
Query: 233 RSHIRCTHCWRPAAAGRFGVDGRRIAQ---DQHLHLLRQ*GYGHHAKFRTGIRETDASVQ 403
RS +R T C+ P G +A +Q + G G + TG+R +
Sbjct: 105 RSRVRGTDCYEPGTTVEVNYHGVLLASGPVEQLCARATKTGRGRAVAWGTGVRLPGFVLD 164
Query: 404 VLGKNVRRGNEKGSG 448
L +VRRG + +G
Sbjct: 165 ALVSDVRRGGVEATG 179
>09_04_0258 - 16175258-16176069,16176111-16176414
Length = 371
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 234 RHSVGSRVLIRPSLGTCRLRRDRHRPAPDPVPERRGNR 121
R G+ +P G RLRR RH A P +R G R
Sbjct: 136 RGEAGAPEAEQPRGGAVRLRRLRHAAAVPPARQRHGRR 173
>12_02_0749 - 22758317-22760407
Length = 696
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -3
Query: 336 RRRCRCWSWAIRRPSTPNR 280
RRRCR S A RRP TP R
Sbjct: 14 RRRCRRLSGANRRPETPPR 32
>09_04_0350 + 16899076-16900164
Length = 362
Score = 27.9 bits (59), Expect = 5.4
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -3
Query: 369 RNFAWCPYPHWRRRCRCWSW 310
R W + WR+R CW W
Sbjct: 245 RRRTWRQHGEWRQRSGCWQW 264
>05_03_0638 - 16489181-16489210,16489486-16489806,16489878-16489919
Length = 130
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 218 LPTLWRSHIRCTHCWRPAAAGRF 286
LP + + C +C RP AAGRF
Sbjct: 89 LPAVAADLVDCMNCGRPVAAGRF 111
>01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309
Length = 330
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 362 SHGVHILIGGEDAGVGLGRFAVHRHRTARQQQAASNEYIEYDFAIASVVE 213
+HG+H+++ DA GR A + R A + S E+ + D A+ VE
Sbjct: 69 THGLHVVLTSRDA--ARGRDATEQIRAAAGKPGVSVEWRQLDVTDAASVE 116
>07_03_0543 +
19272389-19272534,19273337-19273496,19273584-19273741,
19273852-19273945,19274082-19274198,19275119-19275229,
19275309-19275396,19275615-19275718,19275796-19275867,
19275950-19276039,19276151-19276308,19276746-19276752,
19277140-19277194,19277273-19277421,19277543-19277664,
19277916-19278105
Length = 606
Score = 27.5 bits (58), Expect = 7.1
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = +3
Query: 165 GDLDAAYKYLDSAGSKLDYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTNTCIFSANE 344
GD D AYK L+ L++ + L + G +L G V G S K E
Sbjct: 107 GDFDKAYKQLEEKRMFLEHALLYDAYALFLFSKGKVLEAGKVYEVGISRKA--------E 158
Query: 345 DMDTMRNFEQVFVKLMRRYKYLEKMFEE 428
+D ++ +F+ K+LEK+ EE
Sbjct: 159 PLDHLKKMHTIFL------KHLEKIVEE 180
>06_01_0218 +
1647624-1647757,1648044-1648112,1648493-1648549,
1648768-1648934,1649661-1649716,1650319-1650490,
1650747-1650810,1651037-1651119,1651243-1651334,
1652028-1652134,1652398-1652461,1652630-1652770
Length = 401
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = -3
Query: 168 RHRPAPDPVPERRGNRS 118
R RPAPDPV RG+R+
Sbjct: 12 RRRPAPDPVAVLRGHRA 28
>12_02_1081 + 25914180-25914371,25918121-25919104
Length = 391
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = -3
Query: 201 PSLGTCRLRR-DRHRP-APDPVP 139
P LG CRLRR + HRP P+ VP
Sbjct: 11 PPLGPCRLRRQELHRPRRPNHVP 33
>08_01_1019 - 10290820-10291393,10293978-10294348
Length = 314
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 218 LPTLWRSHIRCTHCWRPAAAGR 283
L +WR + C WR AAA R
Sbjct: 37 LEDVWRGAMACCRAWRDAAASR 58
>03_03_0025 +
13848450-13849420,13850921-13851131,13851327-13851459,
13851576-13851832
Length = 523
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 228 SVGSRVLIRPSLGTCRLRRDRHRPAPDPVPE-RRGNRSGHTSLS 100
S GSR+ RP G + + P P P PE R H S+S
Sbjct: 120 SGGSRLARRPKKGILKAQSSSSAPPPPPSPEVELLRRRRHVSIS 163
>03_02_0390 + 8056006-8057502
Length = 498
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 260 WRPAAAGRFGV-DGRRIAQDQHLHLLRQ*GYGHHAK 364
W AA R DG + + HLHL+R+ G+GH A+
Sbjct: 83 WALLAAARAATPDG--VLRLAHLHLIRELGHGHLAR 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,022,186
Number of Sequences: 37544
Number of extensions: 390103
Number of successful extensions: 1528
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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