Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0388
(530 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25352| Best HMM Match : W2 (HMM E-Value=9.1e-20) 142 2e-34
SB_23284| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_59343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13) 29 1.8
SB_44951| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13) 29 1.8
SB_42832| Best HMM Match : ShTK (HMM E-Value=4.6e-07) 29 1.8
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_33131| Best HMM Match : DUF1168 (HMM E-Value=1.7e-06) 29 2.4
SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_2798| Best HMM Match : DNA_pol_B_2 (HMM E-Value=7.9e-10) 29 2.4
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 29 3.1
SB_56651| Best HMM Match : DUF496 (HMM E-Value=8.5) 28 4.1
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_39891| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.11) 28 4.1
SB_4026| Best HMM Match : MSSP (HMM E-Value=1.3) 28 5.4
SB_51904| Best HMM Match : CH (HMM E-Value=0.0058) 28 5.4
SB_9776| Best HMM Match : 7tm_1 (HMM E-Value=8.2e-08) 28 5.4
SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14) 27 7.2
SB_18415| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_9511| Best HMM Match : DUF11 (HMM E-Value=0.097) 27 7.2
SB_53392| Best HMM Match : Thermopsin (HMM E-Value=0.49) 27 7.2
SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40) 27 7.2
SB_41761| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.025) 27 7.2
SB_4830| Best HMM Match : Rad10 (HMM E-Value=9.7) 27 7.2
SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_21382| Best HMM Match : Ail_Lom (HMM E-Value=2.5) 27 9.5
SB_50357| Best HMM Match : Toxin_8 (HMM E-Value=2.4) 27 9.5
SB_14316| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
>SB_25352| Best HMM Match : W2 (HMM E-Value=9.1e-20)
Length = 457
Score = 142 bits (343), Expect = 2e-34
Identities = 73/147 (49%), Positives = 98/147 (66%), Gaps = 6/147 (4%)
Frame = +3
Query: 99 EKEKYDPNGFRDALVQGLERA---GGDLDAAYKYLDSAGSKLDYRRYGEVIFDVLIAGGL 269
EKEK+ P GFRDA++ GL G DL+ K+LD++G KL+YR YGE +FDVL A
Sbjct: 2 EKEKHHPLGFRDAIISGLNDLNDKGYDLEQVAKFLDTSGGKLNYRLYGEFLFDVLFAA-- 59
Query: 270 LLPGGSVSMDGESP---KTNTCIFSANEDMDTMRNFEQVFVKLMRRYKYLEKMFEEEMKK 440
PGGS+ DG +P KTN CIF AN D +T+R Q+ KL+ RY+YL+K +E+EM K
Sbjct: 60 --PGGSIVEDGPNPSTYKTNICIFEANNDNETLRKHVQMHNKLICRYRYLQKSYEDEMNK 117
Query: 441 VLVYLKGXDPEQRXKLARMTALWIGNG 521
+L++LKG E+R KLA T + + NG
Sbjct: 118 ILLFLKGFTDEEREKLAFTTGVVLANG 144
>SB_23284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 209 KTRLPTLWRSHIRCTHCWRPAAAG 280
+ RLP WRS R H W+P+ G
Sbjct: 19 RDRLPFQWRSRARRNHGWKPSLKG 42
>SB_59343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 428 LFEHFFQVLVPTHQFHEYLFEISHGVHILIGGEDAG 321
+F H VPT QF++Y EIS + I +GG G
Sbjct: 140 VFAHIISTEVPTVQFNQYWVEISDAL-ISLGGVSQG 174
>SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13)
Length = 609
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 76 GSRPEKEMRKRSMTRTVSATLWYRVWSGPVAISTQPTST*TRP--DQNSTT 222
G + KE +K TV T + P AIS+QPT +P D+N T
Sbjct: 40 GGQYSKEQQKAGQDNTVDMTQQHDRMGDPDAISSQPTEDTVKPMADKNRPT 90
>SB_44951| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13)
Length = 366
Score = 29.5 bits (63), Expect = 1.8
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 76 GSRPEKEMRKRSMTRTVSATLWYRVWSGPVAISTQPTST*TRP--DQNSTT 222
G + KE +K TV T + P AIS+QPT +P D+N T
Sbjct: 40 GGQYSKEQQKAGQDNTVDMTQQHDRMGDPDAISSQPTEDTVKPMADKNRPT 90
>SB_42832| Best HMM Match : ShTK (HMM E-Value=4.6e-07)
Length = 500
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 519 RYRSTVQSCAPAXCAVRDXSLSSRPEPFSFPLRTFFPSTCT---DASVSRIPVRNFAW 355
R + + S P C + S+S P+P+ +P+ T +P T +VS+ VR + W
Sbjct: 160 RTDAEINSRCPYSCR-KYRSVSPAPQPYPYPIGTLYPYQPTPVPGVTVSQPKVRGWQW 216
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
Frame = +3
Query: 69 GQRIKTRKRDEK-----EKYDPNGFRDALVQGLER 158
G++ K RK DEK +K+DP+G LV+ LER
Sbjct: 204 GEKDKGRKSDEKSEDGEKKFDPSGCDKDLVEALER 238
>SB_33131| Best HMM Match : DUF1168 (HMM E-Value=1.7e-06)
Length = 114
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 335 GEDAGVGLGRFAVHRHRTARQQQAASNEYIEYDFAIASVV 216
G AG G G F H +R R+++ EYIE ASV+
Sbjct: 69 GSSAGAGSGEF--HVYRATRRREYNRQEYIEKKSKEASVI 106
>SB_16907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -2
Query: 313 LGDSPSIDTEPPGSSRPPAMSTSNMTSP*RR*SSFDPAES 194
L D+P+ + PP S+ P A ST M+S F PA +
Sbjct: 162 LWDAPTPTSAPPASAPPKAQSTQGMSSGTSEQPWFSPANT 201
>SB_2798| Best HMM Match : DNA_pol_B_2 (HMM E-Value=7.9e-10)
Length = 1378
Score = 29.1 bits (62), Expect = 2.4
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Frame = +2
Query: 278 GRFGVDGRRIAQDQH-----LHLLRQ*GYGHHAKFRTGIRETDASVQV-LGKNVRRGNEK 439
G GV +R +D + ++ LRQ K RT + D V + L N+ E
Sbjct: 92 GSGGVKRKRDPEDDNGKEDVVYELRQTSTKRSTKMRTDCTDYDLKVDLPLRDNLEEALED 151
Query: 440 GSGLLERLXSRTAHXAGAHD 499
G+L+R+ T H HD
Sbjct: 152 VEGVLDRVLDDTLHGVQEHD 171
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 40 VRR*KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVWSGP 162
V R K + RV + + R+R + LWYR WS P
Sbjct: 560 VEREKREKERVQKKLEKDKERERQREQKRKEALWYREWSRP 600
>SB_56651| Best HMM Match : DUF496 (HMM E-Value=8.5)
Length = 114
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 428 LFEHFFQVLVPTHQFHEYLFEISHGVHILIGGEDAG 321
+F H VPT QF++Y EIS + I +GG G
Sbjct: 11 VFAHIKSTEVPTVQFNQYWVEISDAL-ISLGGVSQG 45
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 428 LFEHFFQVLVPTHQFHEYLFEISHGVHILIGGEDAG 321
+F H VPT QF++Y EIS + I +GG G
Sbjct: 1227 VFAHIKSTEVPTVQFNQYWVEISDAL-ISLGGVSQG 1261
>SB_10566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1264
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 428 LFEHFFQVLVPTHQFHEYLFEISHGVHILIGGEDAG 321
+F H VPT QF++Y EIS + I +GG G
Sbjct: 133 VFAHIKSTEVPTVQFNQYWVEISDAL-ISLGGVSQG 167
>SB_9896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -2
Query: 385 FTNTCSKFRMVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPA 257
+ + S+ R +++++ ++QV PSI ++PP PPA
Sbjct: 127 YQRSTSQDRHIAMTTRKAQVQVSASSSGPSIASQPPQPPAPPA 169
>SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 428 LFEHFFQVLVPTHQFHEYLFEISHGVHILIGGEDAG 321
+F H VPT QF++Y EIS + I +GG G
Sbjct: 131 VFAHIKSTEVPTVQFNQYWVEISDAL-ISLGGVSQG 165
>SB_39891| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.11)
Length = 285
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 428 LFEHFFQVLVPTHQFHEYLFEISHGVHILIGGEDAG 321
+F H VPT QF++Y EIS + I +GG G
Sbjct: 133 VFAHIKSTEVPTVQFNQYWVEISDAL-ISLGGVSQG 167
>SB_4026| Best HMM Match : MSSP (HMM E-Value=1.3)
Length = 109
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 342 EDMDTMRNFEQVFVKLMRRYKYLEKMFEEEMKKV 443
+DM MR Q++ K MRR + L +M ++M+++
Sbjct: 68 KDMRRMRGLHQMWAKDMRRMRSLPQMRAKDMRRM 101
>SB_51904| Best HMM Match : CH (HMM E-Value=0.0058)
Length = 1187
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 150 LERAGGDLDAAYKYLDSAGSKLDYRRYGEVIFDVLIAGGLLLPGGSVSMDGESPKTN 320
L+ G D +Y ++ D + + DV+ G L+ GG +S ES TN
Sbjct: 543 LDSLGSQGDPTEEYREAKDLIRDILNHKPDVVDVITKGNELIDGGKISSADESEITN 599
>SB_9776| Best HMM Match : 7tm_1 (HMM E-Value=8.2e-08)
Length = 409
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -3
Query: 195 LGTCRLRRDRHRPAPDPVPERRGNRSGHTSLSHLFFWS*S-VDPIILVF 52
L C + RDR+ P+ R + HT++ +F W S V +I ++
Sbjct: 26 LSLCAITRDRYLAVTSPLQYLRRMPNAHTAVQIVFCWVTSLVSAVITIY 74
>SB_50258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 795
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 301 PSIDTEPPGSSRPPAMSTSNMTSP*R 224
P D PP S PP +S S+ ++P R
Sbjct: 733 PPPDESPPSSKHPPTVSPSSSSAPPR 758
>SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14)
Length = 961
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 428 LFEHFFQVLVPTHQFHEYLFEISHGVHILIGGEDAG 321
+F H VPT QF++Y EIS + I +GG G
Sbjct: 293 VFAHIKSTEVPTVQFNQYWKEISDAL-ISLGGVSQG 327
>SB_18415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Frame = -2
Query: 385 FTNT-CSKFRMV--SISSLAEKMQVLVLGD---SPSIDTEPPGSSRPPAMSTS 245
F+NT CS F ++ SI++ K+ V +P + T PP +RPP STS
Sbjct: 377 FSNTNCSTFNILFSSITNPCAKVFVECCNGVTPAPPLGTLPPPGTRPPPPSTS 429
>SB_9511| Best HMM Match : DUF11 (HMM E-Value=0.097)
Length = 812
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Frame = -3
Query: 507 TVQSCAPAXCAVRDXSLSSRPEPFSFPLRTFFPSTCTD-----ASVSRIPVRNFAWCPY 346
TV+ AP C+ ++P+P +F TCTD ++ P+ N+A Y
Sbjct: 551 TVEVTAPNGCSFSGEVTFTKPDPLNFTATKAKDITCTDGIIELSTTGGTPIYNYAIWSY 609
>SB_53392| Best HMM Match : Thermopsin (HMM E-Value=0.49)
Length = 750
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 165 GDLDAAYKYLDSAGSKLDYRRYGEVIFDVLIAGGLLLPGG 284
G +KY SAG+ DY Y V DV++ + L G
Sbjct: 486 GTTKLTFKYRLSAGTNADYSVYALVFIDVVVKYNVRLTRG 525
>SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40)
Length = 1198
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +3
Query: 186 KYLDSAGSKLDYRRYGEVIFDVLIAGGLLLPG-GSVSMDGESPKTNTCIFSANEDMDTMR 362
++ ++ S +DY YGE I D I + GS ++ T++ + +E D
Sbjct: 724 RFYENNSSSIDYNVYGETINDASIGAEMAKQSDGSADKHSKNATTDSHVAIESESPDVTE 783
Query: 363 N 365
N
Sbjct: 784 N 784
>SB_41761| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.025)
Length = 1480
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +3
Query: 12 RLIRTIYCMSQKVEKPVLSGQRIKTRKRDEKEKYDPNGFRDALVQ 146
R+ + + K +K L G +KT + D +E YDP F D + Q
Sbjct: 151 RIFERVERFAPKEQKKALVGY-LKTHRIDGQEGYDPKTFIDNIKQ 194
>SB_4830| Best HMM Match : Rad10 (HMM E-Value=9.7)
Length = 231
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 293 RHRTARQQQAASNEYIEYDFAIASVV 216
RHRT RQQ AS E + +FA +V
Sbjct: 36 RHRTKRQQNMASLEELSTNFAPPGIV 61
>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4247
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 333 SANEDMDTMRNFEQVFVKLMRRYKYLEKMFEEEMKKVLVY 452
S N DMD + Q KL + K LEK ++E++++ V+
Sbjct: 1496 SQNPDMDLLAQHYQQLAKLQKHKKELEK-HKQELEELAVW 1534
>SB_21382| Best HMM Match : Ail_Lom (HMM E-Value=2.5)
Length = 473
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +2
Query: 263 RPAAAGRFGV----DGRRIAQDQHLHLLRQ*GYGHHA 361
R AAAG FG D R ++ LH + GYGHH+
Sbjct: 224 RYAAAGFFGRQAIDDSRPTLEESRLHEGTKYGYGHHS 260
>SB_50357| Best HMM Match : Toxin_8 (HMM E-Value=2.4)
Length = 304
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 231 GEVIFDVLIAGGLLLPGGSVSMDGESPKTNT 323
GEV F +G + PGGSV ++G S + T
Sbjct: 222 GEVSFPQSYSGSVESPGGSVEINGFSARQKT 252
>SB_14316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 133 TLWYRVWSGPVAISTQPTST*TRPDQNSTTDAMAKSYSMY 252
++W +WSG + + PT+ P N +T+ M K SM+
Sbjct: 712 SVWEFIWSGLSSNTEAPTT----PTTNPSTEEMEKKISMF 747
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,636,234
Number of Sequences: 59808
Number of extensions: 394988
Number of successful extensions: 1415
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1191330434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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