Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0388
(530 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 2.7
Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z99276-2|CAB16482.1| 388|Caenorhabditis elegans Hypothetical pr... 27 6.3
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 27 6.3
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 27 6.3
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 27 6.3
AL023843-2|CAA19523.1| 388|Caenorhabditis elegans Hypothetical ... 27 6.3
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 27 6.3
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 27 6.3
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 27 6.3
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 27 6.3
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 27 8.4
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 358 MVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSP 230
+VS SS V+ +PS P +S P STSN T+P
Sbjct: 466 VVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTP 508
>Z74043-7|CAA98539.2| 705|Caenorhabditis elegans Hypothetical
protein T19B10.5 protein.
Length = 705
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +1
Query: 70 VNGSRPEKEMRKRSMTRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTTDAMAK 237
V+ S +KEMR + R+ + T V P+ + PTS T P + ++TD+ K
Sbjct: 324 VSDSDDDKEMRYHPLFRSNTLT---HVHFNPLGTISTPTSIATTPQRCTSTDSKQK 376
>Z99276-2|CAB16482.1| 388|Caenorhabditis elegans Hypothetical
protein Y52D3.1a protein.
Length = 388
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/60 (21%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 345 DMDTMRNFEQVFVKLMRR-YKYLEKMFEEEMKKVLVYLKGXDPEQRXKLARM-TALWIGN 518
DM ++++ +++ + + R ++L + F +EM + + DP+QR + + ++ W+G+
Sbjct: 278 DMISLKDDQKMGLDISHRPQEHLTRRFSKEMHEFIANCLDYDPQQRGSASDLKSSAWLGS 337
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 115 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTT 222
T T +AT P +TQPT+T T P +TT
Sbjct: 212 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 247
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 115 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTT 222
T T +AT P +TQPT+T T P +TT
Sbjct: 208 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 243
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 115 TRTVSATLWYRVWSGPVAISTQPTST*TRPDQNSTT 222
T T +AT P +TQPT+T T P +TT
Sbjct: 151 TTTTTATTTTTTTPLPTTTTTQPTTTTTEPTTTTTT 186
>AL023843-2|CAA19523.1| 388|Caenorhabditis elegans Hypothetical
protein Y52D3.1a protein.
Length = 388
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/60 (21%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 345 DMDTMRNFEQVFVKLMRR-YKYLEKMFEEEMKKVLVYLKGXDPEQRXKLARM-TALWIGN 518
DM ++++ +++ + + R ++L + F +EM + + DP+QR + + ++ W+G+
Sbjct: 278 DMISLKDDQKMGLDISHRPQEHLTRRFSKEMHEFIANCLDYDPQQRGSASDLKSSAWLGS 337
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 52 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 153
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 52 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 153
KN+Y N + +E K R +S W RVW
Sbjct: 493 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 526
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 52 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 153
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 52 KNQYYRVNGSRPEKEMRKRSMTRTVSATLWYRVW 153
KN+Y N + +E K R +S W RVW
Sbjct: 552 KNEYIATNFDQKPRESVKNEHPRLISDDGWSRVW 585
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 301 PSIDTEPPGSSRPPAMSTSNMTSP*RR*SSFDP 203
P+I T PP + PP TS+ T R ++ P
Sbjct: 369 PTIQTPPPTTQTPPTTQTSSTTQTPRTKQTWAP 401
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,848,463
Number of Sequences: 27780
Number of extensions: 288148
Number of successful extensions: 1105
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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