Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0377
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    25   1.4  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    25   1.4  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    25   1.9  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    25   1.9  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    24   4.3  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    23   5.7  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   7.5  
AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    23   7.5  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +2

Query: 230 KMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDS 367
           K +KSSE     +E   +V V ++R     +++S   L KK+   S
Sbjct: 16  KRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSS 61


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +2

Query: 230 KMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDS 367
           K +KSSE     +E   +V V ++R     +++S   L KK+   S
Sbjct: 16  KRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSS 61


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = +2

Query: 131 FRRHCSHNIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQ 301
           F R  +    N+S       L H++ E + + ++MKK+ EE   + + K    V+++
Sbjct: 407 FTRLTTVEEQNVSSGCSHKDLHHILKELQFITNRMKKADEEQELISDWKFAAMVVDR 463


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 14/57 (24%), Positives = 28/57 (49%)
 Frame = +2

Query: 131 FRRHCSHNIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQ 301
           F R  +    N+S       L H++ E + + ++MKK+ EE   + + K    V+++
Sbjct: 407 FTRLTTVEEQNVSSGCSHKDLHHILKELQFITNRMKKADEEQELISDWKFAAMVVDR 463


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 558 DWYMFKSSFANNIASCPPAPAVSSKSTP 475
           ++ M    F N+IASC P  + ++ S+P
Sbjct: 5   NFVMSSYQFVNSIASCYPNNSQNTNSSP 32


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 540 SSFANNIASCPPAPAVSSKSTPPSVNGGS 454
           S+  N+I S PP   ++ K  P    GG+
Sbjct: 239 SAIKNSIMSIPPRRQMTGKPGPTIATGGA 267


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +2

Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIK 388
           E +   S  ++ SE+    Q  K   N  E +    D I   +ELN  E    E  +++K
Sbjct: 215 EADRYASLKQECSEKQVHFQLFKLYHNEKEAKRLKEDQISKQQELNIIEKRKEEADEVLK 274

Query: 389 EE 394
           E+
Sbjct: 275 EK 276


>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = +2

Query: 212 HENLLSKMKKSSEEARRLQEIKPIVNVLE 298
           +EN+  +M+ S    +++Q ++  V+VLE
Sbjct: 108 YENVHVQMRNSQPSEKQVQRLQKAVDVLE 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,310
Number of Sequences: 2352
Number of extensions: 8760
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)