BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0377
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011873-1|AAH11873.1| 380|Homo sapiens mitochondrial translati... 54 5e-07
BC014428-1|AAH14428.1| 271|Homo sapiens MTRF1L protein protein. 53 9e-07
AL080276-8|CAB65994.1| 380|Homo sapiens mitochondrial translati... 53 9e-07
AL080276-7|CAI18898.1| 271|Homo sapiens mitochondrial translati... 53 9e-07
BC042196-1|AAH42196.1| 445|Homo sapiens mitochondrial translati... 51 3e-06
AL354696-6|CAI16617.1| 226|Homo sapiens mitochondrial translati... 51 3e-06
AL354696-5|CAI16615.1| 445|Homo sapiens mitochondrial translati... 51 3e-06
AF072934-1|AAD12759.1| 445|Homo sapiens translational release f... 50 5e-06
BC064926-1|AAH64926.1| 636|Homo sapiens EIF3A protein protein. 34 0.44
U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation fa... 33 0.77
U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein. 33 0.77
D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein. 33 0.77
BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain cont... 33 0.77
BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation ... 33 0.77
BC054342-1|AAH54342.1| 812|Homo sapiens EIF3A protein protein. 33 0.77
AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation ... 33 0.77
AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein pr... 33 0.77
AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein. 33 0.77
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 32 1.8
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 32 1.8
BC107776-1|AAI07777.1| 640|Homo sapiens EIF3A protein protein. 32 1.8
BC033769-1|AAH33769.1| 634|Homo sapiens EIF3A protein protein. 32 1.8
U51903-1|AAB37765.1| 1575|Homo sapiens RasGAP-related protein pr... 31 2.3
AY351902-1|AAQ81291.1| 1071|Homo sapiens testis specific IQ moti... 31 2.3
AB208856-1|BAD92093.1| 1155|Homo sapiens IQ motif containing GTP... 31 2.3
X91141-1|CAA62580.1| 862|Homo sapiens rabaptin-5 protein. 30 5.4
BC041700-1|AAH41700.1| 862|Homo sapiens RABEP1 protein protein. 30 5.4
BC032435-1|AAH32435.1| 716|Homo sapiens RABEP1 protein protein. 30 5.4
AF098638-1|AAC70781.1| 829|Homo sapiens rabaptin-4 protein. 30 5.4
>BC011873-1|AAH11873.1| 380|Homo sapiens mitochondrial
translational release factor 1-like protein.
Length = 380
Score = 53.6 bits (123), Expect = 5e-07
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +2
Query: 311 LYDSIESLKELNKKEGDDSE-IKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXT-EGGVL 484
L + + L+E D++E ++K+ + E + K T E ++
Sbjct: 71 LNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENDLI 130
Query: 485 LELTAGAGGQEAMLFAKELLNMYQSYAINKGWEVD 589
LE+TAG GGQEAMLF E+ +MYQ YA K W +
Sbjct: 131 LEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFE 165
>BC014428-1|AAH14428.1| 271|Homo sapiens MTRF1L protein protein.
Length = 271
Score = 52.8 bits (121), Expect = 9e-07
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +2
Query: 311 LYDSIESLKELNKKEGDDSE-IKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXT-EGGVL 484
L + L+E D++E ++K+ + E + K T E ++
Sbjct: 71 LNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENDLI 130
Query: 485 LELTAGAGGQEAMLFAKELLNMYQSYAINKGWEVD 589
LE+TAG GGQEAMLF E+ +MYQ YA K W +
Sbjct: 131 LEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFE 165
>AL080276-8|CAB65994.1| 380|Homo sapiens mitochondrial
translational release factor 1-like protein.
Length = 380
Score = 52.8 bits (121), Expect = 9e-07
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +2
Query: 311 LYDSIESLKELNKKEGDDSE-IKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXT-EGGVL 484
L + L+E D++E ++K+ + E + K T E ++
Sbjct: 71 LNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENDLI 130
Query: 485 LELTAGAGGQEAMLFAKELLNMYQSYAINKGWEVD 589
LE+TAG GGQEAMLF E+ +MYQ YA K W +
Sbjct: 131 LEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFE 165
>AL080276-7|CAI18898.1| 271|Homo sapiens mitochondrial
translational release factor 1-like protein.
Length = 271
Score = 52.8 bits (121), Expect = 9e-07
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +2
Query: 311 LYDSIESLKELNKKEGDDSE-IKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXT-EGGVL 484
L + L+E D++E ++K+ + E + K T E ++
Sbjct: 71 LNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENDLI 130
Query: 485 LELTAGAGGQEAMLFAKELLNMYQSYAINKGWEVD 589
LE+TAG GGQEAMLF E+ +MYQ YA K W +
Sbjct: 131 LEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFE 165
>BC042196-1|AAH42196.1| 445|Homo sapiens mitochondrial
translational release factor 1 protein.
Length = 445
Score = 51.2 bits (117), Expect = 3e-06
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Frame = +2
Query: 134 RRHCSHNIMNL-SDPAIQTYLKHLMVEHENL---LSKMKKSSEEARRLQ----EIKPIVN 289
RR+C + L A+Q Y+++L E++ L L + + E R L E+ P+
Sbjct: 59 RRYCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAA 118
Query: 290 VLEQRIALYDSIESLKELNKK--EGDDSEIKKM-IKEEAAIYLKRXXXXXXXXXXXXXXX 460
+ ++ +IE L+ + K + D+ +++++ ++E I K
Sbjct: 119 IYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKE 178
Query: 461 XXTEGGVLLELTAG--AGGQEAMLFAKELLNMYQSYAINKGWEVDI 592
+ V+LE+TAG GG F +E+ +MYQ+Y+ K W+ ++
Sbjct: 179 KYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFEL 224
>AL354696-6|CAI16617.1| 226|Homo sapiens mitochondrial
translational release factor 1 protein.
Length = 226
Score = 51.2 bits (117), Expect = 3e-06
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Frame = +2
Query: 134 RRHCSHNIMNL-SDPAIQTYLKHLMVEHENL---LSKMKKSSEEARRLQ----EIKPIVN 289
RR+C + L A+Q Y+++L E++ L L + + E R L E+ P+
Sbjct: 59 RRYCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAA 118
Query: 290 VLEQRIALYDSIESLKELNKK--EGDDSEIKKM-IKEEAAIYLKRXXXXXXXXXXXXXXX 460
+ ++ +IE L+ + K + D+ +++++ ++E I K
Sbjct: 119 IYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKE 178
Query: 461 XXTEGGVLLELTAG--AGGQEAMLFAKELLNMYQSYAINKGWEVDI 592
+ V+LE+TAG GG F +E+ +MYQ+Y+ K W+ ++
Sbjct: 179 KYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFEL 224
>AL354696-5|CAI16615.1| 445|Homo sapiens mitochondrial
translational release factor 1 protein.
Length = 445
Score = 51.2 bits (117), Expect = 3e-06
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
Frame = +2
Query: 134 RRHCSHNIMNL-SDPAIQTYLKHLMVEHENL---LSKMKKSSEEARRLQ----EIKPIVN 289
RR+C + L A+Q Y+++L E++ L L + + E R L E+ P+
Sbjct: 59 RRYCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAA 118
Query: 290 VLEQRIALYDSIESLKELNKK--EGDDSEIKKM-IKEEAAIYLKRXXXXXXXXXXXXXXX 460
+ ++ +IE L+ + K + D+ +++++ ++E I K
Sbjct: 119 IYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKE 178
Query: 461 XXTEGGVLLELTAG--AGGQEAMLFAKELLNMYQSYAINKGWEVDI 592
+ V+LE+TAG GG F +E+ +MYQ+Y+ K W+ ++
Sbjct: 179 KYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFEL 224
>AF072934-1|AAD12759.1| 445|Homo sapiens translational release
factor 1 protein.
Length = 445
Score = 50.4 bits (115), Expect = 5e-06
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Frame = +2
Query: 134 RRHCSHNIMNL-SDPAIQTYLKHLMVEHENL---LSKMKKSSEEARRLQ----EIKPIVN 289
RR+C + L + A+Q Y+++L E++ L L + + E R L E+ P+
Sbjct: 59 RRYCLQDTKMLWNHKALQKYMENLSKEYQTLEQCLQHIPVNEESRRSLNRRHAELAPLAA 118
Query: 290 VLEQRIALYDSIESL----KELNKKEGDDSEIKKMIKEEAAIYLKRXXXXXXXXXXXXXX 457
+ ++ +IE L K LNK++ + ++ ++E I K
Sbjct: 119 IYQETQETEQAIEELGSMCKSLNKRD-EKQLLELALEERQTIDQKINMLYNELFQSLVPK 177
Query: 458 XXXTEGGVLLELTAG--AGGQEAMLFAKELLNMYQSYAINKGWEVD 589
+ V+LE+TAG GG F +E+ +MYQ+Y+ K W+ +
Sbjct: 178 EKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFE 223
>BC064926-1|AAH64926.1| 636|Homo sapiens EIF3A protein protein.
Length = 636
Score = 33.9 bits (74), Expect = 0.44
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
A+ YLK+ EH+ +L++ + E RL+ I+ LEQR A + +E
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612
Query: 347 KKEGDDSEIKKMIKEEAAIYLKR 415
++E + E +++++E I K+
Sbjct: 613 RQEAKEREKERILQEHEQIKKKK 635
>U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation
factor 3 large subunit protein.
Length = 1382
Score = 33.1 bits (72), Expect = 0.77
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
A+ YLK+ EH+ +L++ + E RL+ I+ LEQR A + +E
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612
Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
++E + E +++++E I K
Sbjct: 613 RQEAKEREKERILQEHEQIKKK 634
>U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein.
Length = 1382
Score = 33.1 bits (72), Expect = 0.77
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
A+ YLK+ EH+ +L++ + E RL+ I+ LEQR A + +E
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612
Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
++E + E +++++E I K
Sbjct: 613 RQEAKEREKERILQEHEQIKKK 634
>D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein.
Length = 1388
Score = 33.1 bits (72), Expect = 0.77
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
A+ YLK+ EH+ +L++ + E RL+ I+ LEQR A + +E
Sbjct: 559 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 618
Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
++E + E +++++E I K
Sbjct: 619 RQEAKEREKERILQEHEQIKKK 640
>BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain
containing 136 protein.
Length = 1154
Score = 33.1 bits (72), Expect = 0.77
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +2
Query: 92 LRSFLNSERQLLHFRRHCSHNIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQE 271
L+ L + +L + S + N S+ + L+ L ++H+N+ + +K E ++LQE
Sbjct: 389 LKMQLQLQTELRQLKVMKSTLVENQSEKELLCRLQKLHLQHQNVTCEKEKLLERQQQLQE 448
Query: 272 IKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEAAIY 406
Q L D++ S KE N+K D+E ++E +Y
Sbjct: 449 ELQCHEAELQH--LRDTVASFKESNEK---DTETHAQLQEMKQLY 488
>BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation
initiation factor 3, subunit A protein.
Length = 1382
Score = 33.1 bits (72), Expect = 0.77
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
A+ YLK+ EH+ +L++ + E RL+ I+ LEQR A + +E
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612
Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
++E + E +++++E I K
Sbjct: 613 RQEAKEREKERILQEHEQIKKK 634
>BC054342-1|AAH54342.1| 812|Homo sapiens EIF3A protein protein.
Length = 812
Score = 33.1 bits (72), Expect = 0.77
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
A+ YLK+ EH+ +L++ + E RL+ I+ LEQR A + +E
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612
Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
++E + E +++++E I K
Sbjct: 613 RQEAKEREKERILQEHEQIKKK 634
>AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation
initiation factor 3, subunit 10 theta, 150/170kDa
protein.
Length = 1382
Score = 33.1 bits (72), Expect = 0.77
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
A+ YLK+ EH+ +L++ + E RL+ I+ LEQR A + +E
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612
Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
++E + E +++++E I K
Sbjct: 613 RQEAKEREKERILQEHEQIKKK 634
>AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein
protein.
Length = 1033
Score = 33.1 bits (72), Expect = 0.77
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +2
Query: 92 LRSFLNSERQLLHFRRHCSHNIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQE 271
L+ L + +L + S + N S+ + L+ L ++H+N+ + +K E ++LQE
Sbjct: 265 LKMQLQLQTELRQLKVMKSTLVENQSEKELLCRLQKLHLQHQNVTCEKEKLLERQQQLQE 324
Query: 272 IKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEAAIY 406
Q L D++ S KE N+K D+E ++E +Y
Sbjct: 325 ELQCHEAELQH--LRDTVASFKESNEK---DTETHAQLQEMKQLY 364
>AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein.
Length = 1270
Score = 33.1 bits (72), Expect = 0.77
Identities = 27/105 (25%), Positives = 50/105 (47%)
Frame = +2
Query: 92 LRSFLNSERQLLHFRRHCSHNIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQE 271
L+ L + +L + S + N S+ + L+ L ++H+N+ + +K E ++LQE
Sbjct: 505 LKMQLQLQTELRQLKVMKSTLVENQSEKELLCRLQKLHLQHQNVTCEKEKLLERQQQLQE 564
Query: 272 IKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEAAIY 406
Q L D++ S KE N+K D+E ++E +Y
Sbjct: 565 ELQCHEAELQH--LRDTVASFKESNEK---DTETHAQLQEMKQLY 604
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +2
Query: 194 KHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKE 355
K L E+E LL + S EA R+Q + + V +++ LY + S E NKKE
Sbjct: 1609 KELQKEYEILLQSYENVSNEAERIQHV--VEAVRQEKQELYGKLRS-TEANKKE 1659
Score = 30.3 bits (65), Expect = 5.4
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRI-ALYDSIESLKELNKKEGDDSEIKKM 382
E LLS++ E + LQE +N+L Q+I + LKE ++E DD E + M
Sbjct: 1869 EKNTLLSQISTKDGELKMLQEEVTKMNLLNQQIQEELSRVTKLKETAEEEKDDLEERLM 1927
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
Length = 3225
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +2
Query: 194 KHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKE 355
K L E+E LL + S EA R+Q + + V +++ LY + S E NKKE
Sbjct: 1575 KELQKEYEILLQSYENVSNEAERIQHV--VEAVRQEKQELYGKLRS-TEANKKE 1625
Score = 30.3 bits (65), Expect = 5.4
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRI-ALYDSIESLKELNKKEGDDSEIKKM 382
E LLS++ E + LQE +N+L Q+I + LKE ++E DD E + M
Sbjct: 1835 EKNTLLSQISTKDGELKMLQEEVTKMNLLNQQIQEELSRVTKLKETAEEEKDDLEERLM 1893
>BC107776-1|AAI07777.1| 640|Homo sapiens EIF3A protein protein.
Length = 640
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
A+ YLK+ EH+ +L++ + E RL+ I+ LEQR A + +E
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612
Query: 347 KKEGDDSEIKKMIKE 391
++E + E +++++E
Sbjct: 613 RQEAKEREKERILQE 627
>BC033769-1|AAH33769.1| 634|Homo sapiens EIF3A protein protein.
Length = 634
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
A+ YLK+ EH+ +L++ + E RL+ I+ LEQR A + +E
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612
Query: 347 KKEGDDSEIKKMIKE 391
++E + E +++++E
Sbjct: 613 RQEAKEREKERILQE 627
>U51903-1|AAB37765.1| 1575|Homo sapiens RasGAP-related protein
protein.
Length = 1575
Score = 31.5 bits (68), Expect = 2.3
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 215 ENLLSKMKKSS--EEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEI 373
E +++K++ + E+ L +IK I +++ RI L D I K+LNKK+G + EI
Sbjct: 809 EEVVTKIRANQQLEKDLNLMDIK-IGLLVKNRITLEDVISHSKKLNKKKGGEMEI 862
>AY351902-1|AAQ81291.1| 1071|Homo sapiens testis specific IQ motif
containing GTPase activating protein 2 protein.
Length = 1071
Score = 31.5 bits (68), Expect = 2.3
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 215 ENLLSKMKKSS--EEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEI 373
E +++K++ + E+ L +IK I +++ RI L D I K+LNKK+G + EI
Sbjct: 305 EEVVTKIRANQQLEKDLNLMDIK-IGLLVKNRITLEDVISHSKKLNKKKGGEMEI 358
>AB208856-1|BAD92093.1| 1155|Homo sapiens IQ motif containing GTPase
activating protein 2 variant protein.
Length = 1155
Score = 31.5 bits (68), Expect = 2.3
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 215 ENLLSKMKKSS--EEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEI 373
E +++K++ + E+ L +IK I +++ RI L D I K+LNKK+G + EI
Sbjct: 389 EEVVTKIRANQQLEKDLNLMDIK-IGLLVKNRITLEDVISHSKKLNKKKGGEMEI 442
>X91141-1|CAA62580.1| 862|Homo sapiens rabaptin-5 protein.
Length = 862
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKM 382
E ENL ++MKK+ E+A +L + +V +E+ IA + E KE + S++K++
Sbjct: 166 EEENLENEMKKAQEDAEKL---RSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKEL 220
>BC041700-1|AAH41700.1| 862|Homo sapiens RABEP1 protein protein.
Length = 862
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKM 382
E ENL ++MKK+ E+A +L + +V +E+ IA + E KE + S++K++
Sbjct: 166 EEENLENEMKKAQEDAEKL---RSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKEL 220
>BC032435-1|AAH32435.1| 716|Homo sapiens RABEP1 protein protein.
Length = 716
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKM 382
E ENL ++MKK+ E+A +L + +V +E+ IA + E KE + S++K++
Sbjct: 166 EEENLENEMKKAQEDAEKL---RSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKEL 220
>AF098638-1|AAC70781.1| 829|Homo sapiens rabaptin-4 protein.
Length = 829
Score = 30.3 bits (65), Expect = 5.4
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKM 382
E ENL ++MKK+ E+A +L + +V +E+ IA + E KE + S++K++
Sbjct: 166 EEENLENEMKKAQEDAEKL---RSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKEL 220
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,048,449
Number of Sequences: 237096
Number of extensions: 1130189
Number of successful extensions: 7495
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 7302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7494
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -