SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0377
         (596 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011873-1|AAH11873.1|  380|Homo sapiens mitochondrial translati...    54   5e-07
BC014428-1|AAH14428.1|  271|Homo sapiens MTRF1L protein protein.       53   9e-07
AL080276-8|CAB65994.1|  380|Homo sapiens mitochondrial translati...    53   9e-07
AL080276-7|CAI18898.1|  271|Homo sapiens mitochondrial translati...    53   9e-07
BC042196-1|AAH42196.1|  445|Homo sapiens mitochondrial translati...    51   3e-06
AL354696-6|CAI16617.1|  226|Homo sapiens mitochondrial translati...    51   3e-06
AL354696-5|CAI16615.1|  445|Homo sapiens mitochondrial translati...    51   3e-06
AF072934-1|AAD12759.1|  445|Homo sapiens translational release f...    50   5e-06
BC064926-1|AAH64926.1|  636|Homo sapiens EIF3A protein protein.        34   0.44 
U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation fa...    33   0.77 
U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein.                   33   0.77 
D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein.               33   0.77 
BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain cont...    33   0.77 
BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation ...    33   0.77 
BC054342-1|AAH54342.1|  812|Homo sapiens EIF3A protein protein.        33   0.77 
AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation ...    33   0.77 
AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein pr...    33   0.77 
AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein.     33   0.77 
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.                32   1.8  
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot...    32   1.8  
BC107776-1|AAI07777.1|  640|Homo sapiens EIF3A protein protein.        32   1.8  
BC033769-1|AAH33769.1|  634|Homo sapiens EIF3A protein protein.        32   1.8  
U51903-1|AAB37765.1| 1575|Homo sapiens RasGAP-related protein pr...    31   2.3  
AY351902-1|AAQ81291.1| 1071|Homo sapiens testis specific IQ moti...    31   2.3  
AB208856-1|BAD92093.1| 1155|Homo sapiens IQ motif containing GTP...    31   2.3  
X91141-1|CAA62580.1|  862|Homo sapiens rabaptin-5 protein.             30   5.4  
BC041700-1|AAH41700.1|  862|Homo sapiens RABEP1 protein protein.       30   5.4  
BC032435-1|AAH32435.1|  716|Homo sapiens RABEP1 protein protein.       30   5.4  
AF098638-1|AAC70781.1|  829|Homo sapiens rabaptin-4 protein.           30   5.4  

>BC011873-1|AAH11873.1|  380|Homo sapiens mitochondrial
           translational release factor 1-like protein.
          Length = 380

 Score = 53.6 bits (123), Expect = 5e-07
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
 Frame = +2

Query: 311 LYDSIESLKELNKKEGDDSE-IKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXT-EGGVL 484
           L +  + L+E      D++E ++K+ + E  +  K                  T E  ++
Sbjct: 71  LNEKEQELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENDLI 130

Query: 485 LELTAGAGGQEAMLFAKELLNMYQSYAINKGWEVD 589
           LE+TAG GGQEAMLF  E+ +MYQ YA  K W  +
Sbjct: 131 LEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFE 165


>BC014428-1|AAH14428.1|  271|Homo sapiens MTRF1L protein protein.
          Length = 271

 Score = 52.8 bits (121), Expect = 9e-07
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
 Frame = +2

Query: 311 LYDSIESLKELNKKEGDDSE-IKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXT-EGGVL 484
           L +    L+E      D++E ++K+ + E  +  K                  T E  ++
Sbjct: 71  LNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENDLI 130

Query: 485 LELTAGAGGQEAMLFAKELLNMYQSYAINKGWEVD 589
           LE+TAG GGQEAMLF  E+ +MYQ YA  K W  +
Sbjct: 131 LEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFE 165


>AL080276-8|CAB65994.1|  380|Homo sapiens mitochondrial
           translational release factor 1-like protein.
          Length = 380

 Score = 52.8 bits (121), Expect = 9e-07
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
 Frame = +2

Query: 311 LYDSIESLKELNKKEGDDSE-IKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXT-EGGVL 484
           L +    L+E      D++E ++K+ + E  +  K                  T E  ++
Sbjct: 71  LNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENDLI 130

Query: 485 LELTAGAGGQEAMLFAKELLNMYQSYAINKGWEVD 589
           LE+TAG GGQEAMLF  E+ +MYQ YA  K W  +
Sbjct: 131 LEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFE 165


>AL080276-7|CAI18898.1|  271|Homo sapiens mitochondrial
           translational release factor 1-like protein.
          Length = 271

 Score = 52.8 bits (121), Expect = 9e-07
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
 Frame = +2

Query: 311 LYDSIESLKELNKKEGDDSE-IKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXT-EGGVL 484
           L +    L+E      D++E ++K+ + E  +  K                  T E  ++
Sbjct: 71  LNEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENDLI 130

Query: 485 LELTAGAGGQEAMLFAKELLNMYQSYAINKGWEVD 589
           LE+TAG GGQEAMLF  E+ +MYQ YA  K W  +
Sbjct: 131 LEVTAGVGGQEAMLFTSEIFDMYQQYAAFKRWHFE 165


>BC042196-1|AAH42196.1|  445|Homo sapiens mitochondrial
           translational release factor 1 protein.
          Length = 445

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
 Frame = +2

Query: 134 RRHCSHNIMNL-SDPAIQTYLKHLMVEHENL---LSKMKKSSEEARRLQ----EIKPIVN 289
           RR+C  +   L    A+Q Y+++L  E++ L   L  +  + E  R L     E+ P+  
Sbjct: 59  RRYCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAA 118

Query: 290 VLEQRIALYDSIESLKELNKK--EGDDSEIKKM-IKEEAAIYLKRXXXXXXXXXXXXXXX 460
           + ++      +IE L+ + K   + D+ +++++ ++E   I  K                
Sbjct: 119 IYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKE 178

Query: 461 XXTEGGVLLELTAG--AGGQEAMLFAKELLNMYQSYAINKGWEVDI 592
              +  V+LE+TAG   GG     F +E+ +MYQ+Y+  K W+ ++
Sbjct: 179 KYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFEL 224


>AL354696-6|CAI16617.1|  226|Homo sapiens mitochondrial
           translational release factor 1 protein.
          Length = 226

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
 Frame = +2

Query: 134 RRHCSHNIMNL-SDPAIQTYLKHLMVEHENL---LSKMKKSSEEARRLQ----EIKPIVN 289
           RR+C  +   L    A+Q Y+++L  E++ L   L  +  + E  R L     E+ P+  
Sbjct: 59  RRYCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAA 118

Query: 290 VLEQRIALYDSIESLKELNKK--EGDDSEIKKM-IKEEAAIYLKRXXXXXXXXXXXXXXX 460
           + ++      +IE L+ + K   + D+ +++++ ++E   I  K                
Sbjct: 119 IYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKE 178

Query: 461 XXTEGGVLLELTAG--AGGQEAMLFAKELLNMYQSYAINKGWEVDI 592
              +  V+LE+TAG   GG     F +E+ +MYQ+Y+  K W+ ++
Sbjct: 179 KYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFEL 224


>AL354696-5|CAI16615.1|  445|Homo sapiens mitochondrial
           translational release factor 1 protein.
          Length = 445

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 13/166 (7%)
 Frame = +2

Query: 134 RRHCSHNIMNL-SDPAIQTYLKHLMVEHENL---LSKMKKSSEEARRLQ----EIKPIVN 289
           RR+C  +   L    A+Q Y+++L  E++ L   L  +  + E  R L     E+ P+  
Sbjct: 59  RRYCHQDTKMLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAA 118

Query: 290 VLEQRIALYDSIESLKELNKK--EGDDSEIKKM-IKEEAAIYLKRXXXXXXXXXXXXXXX 460
           + ++      +IE L+ + K   + D+ +++++ ++E   I  K                
Sbjct: 119 IYQEIQETEQAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKE 178

Query: 461 XXTEGGVLLELTAG--AGGQEAMLFAKELLNMYQSYAINKGWEVDI 592
              +  V+LE+TAG   GG     F +E+ +MYQ+Y+  K W+ ++
Sbjct: 179 KYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFEL 224


>AF072934-1|AAD12759.1|  445|Homo sapiens translational release
           factor 1 protein.
          Length = 445

 Score = 50.4 bits (115), Expect = 5e-06
 Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
 Frame = +2

Query: 134 RRHCSHNIMNL-SDPAIQTYLKHLMVEHENL---LSKMKKSSEEARRLQ----EIKPIVN 289
           RR+C  +   L +  A+Q Y+++L  E++ L   L  +  + E  R L     E+ P+  
Sbjct: 59  RRYCLQDTKMLWNHKALQKYMENLSKEYQTLEQCLQHIPVNEESRRSLNRRHAELAPLAA 118

Query: 290 VLEQRIALYDSIESL----KELNKKEGDDSEIKKMIKEEAAIYLKRXXXXXXXXXXXXXX 457
           + ++      +IE L    K LNK++ +   ++  ++E   I  K               
Sbjct: 119 IYQETQETEQAIEELGSMCKSLNKRD-EKQLLELALEERQTIDQKINMLYNELFQSLVPK 177

Query: 458 XXXTEGGVLLELTAG--AGGQEAMLFAKELLNMYQSYAINKGWEVD 589
               +  V+LE+TAG   GG     F +E+ +MYQ+Y+  K W+ +
Sbjct: 178 EKYDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFE 223


>BC064926-1|AAH64926.1|  636|Homo sapiens EIF3A protein protein.
          Length = 636

 Score = 33.9 bits (74), Expect = 0.44
 Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
 Frame = +2

Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
           A+  YLK+   EH+ +L++ +   E   RL+   I+     LEQR A    +   +E   
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612

Query: 347 KKEGDDSEIKKMIKEEAAIYLKR 415
           ++E  + E +++++E   I  K+
Sbjct: 613 RQEAKEREKERILQEHEQIKKKK 635


>U78311-1|AAB80695.1| 1382|Homo sapiens translation initiation
           factor 3 large subunit protein.
          Length = 1382

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = +2

Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
           A+  YLK+   EH+ +L++ +   E   RL+   I+     LEQR A    +   +E   
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612

Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
           ++E  + E +++++E   I  K
Sbjct: 613 RQEAKEREKERILQEHEQIKKK 634


>U58046-1|AAB41584.1| 1382|Homo sapiens p167 protein.
          Length = 1382

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = +2

Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
           A+  YLK+   EH+ +L++ +   E   RL+   I+     LEQR A    +   +E   
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612

Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
           ++E  + E +++++E   I  K
Sbjct: 613 RQEAKEREKERILQEHEQIKKK 634


>D50929-1|BAA09488.2| 1388|Homo sapiens KIAA0139 protein.
          Length = 1388

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = +2

Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
           A+  YLK+   EH+ +L++ +   E   RL+   I+     LEQR A    +   +E   
Sbjct: 559 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 618

Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
           ++E  + E +++++E   I  K
Sbjct: 619 RQEAKEREKERILQEHEQIKKK 640


>BC150331-1|AAI50332.1| 1154|Homo sapiens coiled-coil domain
           containing 136 protein.
          Length = 1154

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 27/105 (25%), Positives = 50/105 (47%)
 Frame = +2

Query: 92  LRSFLNSERQLLHFRRHCSHNIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQE 271
           L+  L  + +L   +   S  + N S+  +   L+ L ++H+N+  + +K  E  ++LQE
Sbjct: 389 LKMQLQLQTELRQLKVMKSTLVENQSEKELLCRLQKLHLQHQNVTCEKEKLLERQQQLQE 448

Query: 272 IKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEAAIY 406
                    Q   L D++ S KE N+K   D+E    ++E   +Y
Sbjct: 449 ELQCHEAELQH--LRDTVASFKESNEK---DTETHAQLQEMKQLY 488


>BC114429-1|AAI14430.1| 1382|Homo sapiens eukaryotic translation
           initiation factor 3, subunit A protein.
          Length = 1382

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = +2

Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
           A+  YLK+   EH+ +L++ +   E   RL+   I+     LEQR A    +   +E   
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612

Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
           ++E  + E +++++E   I  K
Sbjct: 613 RQEAKEREKERILQEHEQIKKK 634


>BC054342-1|AAH54342.1|  812|Homo sapiens EIF3A protein protein.
          Length = 812

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = +2

Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
           A+  YLK+   EH+ +L++ +   E   RL+   I+     LEQR A    +   +E   
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612

Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
           ++E  + E +++++E   I  K
Sbjct: 613 RQEAKEREKERILQEHEQIKKK 634


>AL355598-2|CAI14127.1| 1382|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 10 theta, 150/170kDa
           protein.
          Length = 1382

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = +2

Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
           A+  YLK+   EH+ +L++ +   E   RL+   I+     LEQR A    +   +E   
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612

Query: 347 KKEGDDSEIKKMIKEEAAIYLK 412
           ++E  + E +++++E   I  K
Sbjct: 613 RQEAKEREKERILQEHEQIKKK 634


>AL133027-1|CAB61359.1| 1033|Homo sapiens hypothetical protein
           protein.
          Length = 1033

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 27/105 (25%), Positives = 50/105 (47%)
 Frame = +2

Query: 92  LRSFLNSERQLLHFRRHCSHNIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQE 271
           L+  L  + +L   +   S  + N S+  +   L+ L ++H+N+  + +K  E  ++LQE
Sbjct: 265 LKMQLQLQTELRQLKVMKSTLVENQSEKELLCRLQKLHLQHQNVTCEKEKLLERQQQLQE 324

Query: 272 IKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEAAIY 406
                    Q   L D++ S KE N+K   D+E    ++E   +Y
Sbjct: 325 ELQCHEAELQH--LRDTVASFKESNEK---DTETHAQLQEMKQLY 364


>AB058696-1|BAB47422.1| 1270|Homo sapiens KIAA1793 protein protein.
          Length = 1270

 Score = 33.1 bits (72), Expect = 0.77
 Identities = 27/105 (25%), Positives = 50/105 (47%)
 Frame = +2

Query: 92  LRSFLNSERQLLHFRRHCSHNIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQE 271
           L+  L  + +L   +   S  + N S+  +   L+ L ++H+N+  + +K  E  ++LQE
Sbjct: 505 LKMQLQLQTELRQLKVMKSTLVENQSEKELLCRLQKLHLQHQNVTCEKEKLLERQQQLQE 564

Query: 272 IKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEAAIY 406
                    Q   L D++ S KE N+K   D+E    ++E   +Y
Sbjct: 565 ELQCHEAELQH--LRDTVASFKESNEK---DTETHAQLQEMKQLY 604


>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
          Length = 3259

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +2

Query: 194  KHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKE 355
            K L  E+E LL   +  S EA R+Q +  +  V +++  LY  + S  E NKKE
Sbjct: 1609 KELQKEYEILLQSYENVSNEAERIQHV--VEAVRQEKQELYGKLRS-TEANKKE 1659



 Score = 30.3 bits (65), Expect = 5.4
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 209  EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRI-ALYDSIESLKELNKKEGDDSEIKKM 382
            E   LLS++     E + LQE    +N+L Q+I      +  LKE  ++E DD E + M
Sbjct: 1869 EKNTLLSQISTKDGELKMLQEEVTKMNLLNQQIQEELSRVTKLKETAEEEKDDLEERLM 1927


>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
          Length = 3225

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 20/54 (37%), Positives = 29/54 (53%)
 Frame = +2

Query: 194  KHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKE 355
            K L  E+E LL   +  S EA R+Q +  +  V +++  LY  + S  E NKKE
Sbjct: 1575 KELQKEYEILLQSYENVSNEAERIQHV--VEAVRQEKQELYGKLRS-TEANKKE 1625



 Score = 30.3 bits (65), Expect = 5.4
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +2

Query: 209  EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRI-ALYDSIESLKELNKKEGDDSEIKKM 382
            E   LLS++     E + LQE    +N+L Q+I      +  LKE  ++E DD E + M
Sbjct: 1835 EKNTLLSQISTKDGELKMLQEEVTKMNLLNQQIQEELSRVTKLKETAEEEKDDLEERLM 1893


>BC107776-1|AAI07777.1|  640|Homo sapiens EIF3A protein protein.
          Length = 640

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = +2

Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
           A+  YLK+   EH+ +L++ +   E   RL+   I+     LEQR A    +   +E   
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612

Query: 347 KKEGDDSEIKKMIKE 391
           ++E  + E +++++E
Sbjct: 613 RQEAKEREKERILQE 627


>BC033769-1|AAH33769.1|  634|Homo sapiens EIF3A protein protein.
          Length = 634

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = +2

Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQ--EIKPIVNVLEQRIALYDSIESLKELN- 346
           A+  YLK+   EH+ +L++ +   E   RL+   I+     LEQR A    +   +E   
Sbjct: 553 AVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERL 612

Query: 347 KKEGDDSEIKKMIKE 391
           ++E  + E +++++E
Sbjct: 613 RQEAKEREKERILQE 627


>U51903-1|AAB37765.1| 1575|Homo sapiens RasGAP-related protein
           protein.
          Length = 1575

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = +2

Query: 215 ENLLSKMKKSS--EEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEI 373
           E +++K++ +   E+   L +IK I  +++ RI L D I   K+LNKK+G + EI
Sbjct: 809 EEVVTKIRANQQLEKDLNLMDIK-IGLLVKNRITLEDVISHSKKLNKKKGGEMEI 862


>AY351902-1|AAQ81291.1| 1071|Homo sapiens testis specific IQ motif
           containing GTPase activating protein 2 protein.
          Length = 1071

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = +2

Query: 215 ENLLSKMKKSS--EEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEI 373
           E +++K++ +   E+   L +IK I  +++ RI L D I   K+LNKK+G + EI
Sbjct: 305 EEVVTKIRANQQLEKDLNLMDIK-IGLLVKNRITLEDVISHSKKLNKKKGGEMEI 358


>AB208856-1|BAD92093.1| 1155|Homo sapiens IQ motif containing GTPase
           activating protein 2 variant protein.
          Length = 1155

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
 Frame = +2

Query: 215 ENLLSKMKKSS--EEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEI 373
           E +++K++ +   E+   L +IK I  +++ RI L D I   K+LNKK+G + EI
Sbjct: 389 EEVVTKIRANQQLEKDLNLMDIK-IGLLVKNRITLEDVISHSKKLNKKKGGEMEI 442


>X91141-1|CAA62580.1|  862|Homo sapiens rabaptin-5 protein.
          Length = 862

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 19/58 (32%), Positives = 34/58 (58%)
 Frame = +2

Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKM 382
           E ENL ++MKK+ E+A +L   + +V  +E+ IA      +  E   KE + S++K++
Sbjct: 166 EEENLENEMKKAQEDAEKL---RSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKEL 220


>BC041700-1|AAH41700.1|  862|Homo sapiens RABEP1 protein protein.
          Length = 862

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 19/58 (32%), Positives = 34/58 (58%)
 Frame = +2

Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKM 382
           E ENL ++MKK+ E+A +L   + +V  +E+ IA      +  E   KE + S++K++
Sbjct: 166 EEENLENEMKKAQEDAEKL---RSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKEL 220


>BC032435-1|AAH32435.1|  716|Homo sapiens RABEP1 protein protein.
          Length = 716

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 19/58 (32%), Positives = 34/58 (58%)
 Frame = +2

Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKM 382
           E ENL ++MKK+ E+A +L   + +V  +E+ IA      +  E   KE + S++K++
Sbjct: 166 EEENLENEMKKAQEDAEKL---RSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKEL 220


>AF098638-1|AAC70781.1|  829|Homo sapiens rabaptin-4 protein.
          Length = 829

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 19/58 (32%), Positives = 34/58 (58%)
 Frame = +2

Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKM 382
           E ENL ++MKK+ E+A +L   + +V  +E+ IA      +  E   KE + S++K++
Sbjct: 166 EEENLENEMKKAQEDAEKL---RSVVMPMEKEIAALKDKLTEAEDKIKELEASKVKEL 220


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,048,449
Number of Sequences: 237096
Number of extensions: 1130189
Number of successful extensions: 7495
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 7302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7494
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -