Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0377
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-6|AAB94190.1| 389|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical pr... 32 0.36
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 31 0.82
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 31 0.82
Z81502-4|CAB04107.2| 357|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical pr... 29 1.9
AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin monoox... 29 1.9
Z68215-2|CAA92451.2| 452|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical p... 28 4.4
Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical p... 28 4.4
Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical pr... 28 4.4
U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical pr... 28 4.4
U41992-9|AAK93854.1| 294|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z83129-4|CAB05642.1| 379|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z73897-3|CAE18053.1| 178|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AF039041-6|AAB94190.1| 389|Caenorhabditis elegans Hypothetical
protein W03F8.3 protein.
Length = 389
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2
Query: 485 LELTAGAGGQEAMLFAKELLNMYQSYAINKGWEVD 589
+EL+ GAGGQEAMLF ELL+MYQ A W+ D
Sbjct: 140 IELSCGAGGQEAMLFTGELLDMYQKLAAVNSWKWD 174
>Z81077-3|CAB03067.1| 527|Caenorhabditis elegans Hypothetical
protein F36A2.2 protein.
Length = 527
Score = 31.9 bits (69), Expect = 0.36
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +2
Query: 128 HFRRHCSHNIMNLSDPAIQTYLKHLMVEHENL---LSKMKKSSEEARRLQEIK 277
H R C H+++ D ++ L+H + + EN+ L+K KS EA + +E++
Sbjct: 331 HVFRICHHSLLEYEDLRMRVSLEHRIEDFENIVEELAKRAKSDAEAGKNREVE 383
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 30.7 bits (66), Expect = 0.82
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 540 SSFANNIASCPPAPAVSSKSTPP 472
S AN I CPP+ VS++S+PP
Sbjct: 231 SPSANRITGCPPSTKVSNQSSPP 253
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 30.7 bits (66), Expect = 0.82
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 540 SSFANNIASCPPAPAVSSKSTPP 472
S AN I CPP+ VS++S+PP
Sbjct: 231 SPSANRITGCPPSTKVSNQSSPP 253
>Z81502-4|CAB04107.2| 357|Caenorhabditis elegans Hypothetical
protein F14B6.4 protein.
Length = 357
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +2
Query: 215 ENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEE 394
E L+ ++ ARR K +N I +++L + +GDDS ++K++ EE
Sbjct: 89 EILMIVASRTDSFARRNVLRKTWMNPENSEIIKDGRMKALFLVGMTDGDDSRMRKVVMEE 148
Query: 395 AAIY 406
A IY
Sbjct: 149 ARIY 152
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +2
Query: 248 EEARRLQEIKPIVNVLEQRIALYDSIESLKEL--NKKEGDDSEIKKMIKEE 394
EEAR+ QE + E+ + +Y+ + KEL +K+ ++ EIK+ +EE
Sbjct: 550 EEARKKQEEEEARLKAEEELKIYEEEKRKKELEEERKKKEELEIKRKAEEE 600
>Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical
protein C17H1.5 protein.
Length = 351
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 215 ENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYD-SIESLKELNKKEGDDSEIKKMIKE 391
E + ++K+ EE R E++ N+ +QR D +E++KELN+K+ + EI++ KE
Sbjct: 94 ETQIKEIKEKGEEDVRKVELQR-ANLEKQRTEALDIHLETMKELNEKKFE--EIRQQRKE 150
Query: 392 E 394
+
Sbjct: 151 Q 151
>Z70286-4|CAA94291.2| 533|Caenorhabditis elegans Hypothetical
protein K08C7.2 protein.
Length = 533
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 152 NIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALY-DSIE 328
+IM LS+ + YL+ H +L K + ++ E V +R + D ++
Sbjct: 381 SIMPLSEMQARVYLEEFTGNH--VLPKKNEMTQNVHDKLETMARRYVTSRRHTIQVDYVD 438
Query: 329 SLKELNKKEGDDSEIKKMIKEE 394
++EL K G D ++KK+ KE+
Sbjct: 439 YIEELAKMIGADLDMKKLWKED 460
>AJ582070-1|CAE46540.1| 533|Caenorhabditis elegans flavin
monooxygenase protein.
Length = 533
Score = 29.5 bits (63), Expect = 1.9
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +2
Query: 152 NIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALY-DSIE 328
+IM LS+ + YL+ H +L K + ++ E V +R + D ++
Sbjct: 381 SIMPLSEMQARVYLEEFTGNH--VLPKKNEMTQNVHDKLETMARRYVTSRRHTIQVDYVD 438
Query: 329 SLKELNKKEGDDSEIKKMIKEE 394
++EL K G D ++KK+ KE+
Sbjct: 439 YIEELAKMIGADLDMKKLWKED 460
>Z68215-2|CAA92451.2| 452|Caenorhabditis elegans Hypothetical
protein C53B4.2 protein.
Length = 452
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 227 SKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEE 394
SK K S + RR ++ P+V + Q+ A+ + ++ NKK+ E K+ KEE
Sbjct: 54 SKAKSVSRKMRRTKQ--PVVQPVVQKAAVLSPPDKKEKENKKDEKKDEKKEEKKEE 107
>Z81449-11|CAD44106.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQ-RIALYDSIESLKELNKK 352
A+Q + + ENL + ++K + L ++ ++ +Q R+ + + +E ++ L K
Sbjct: 161 ALQKDVDTYQCQVENLQNSIEKLIRQNEEL--LRKNASLQKQGRMIVEEKMEVVRRLEKT 218
Query: 353 EGDDSEIKKMIKE 391
E + E+KK++KE
Sbjct: 219 EESNIELKKLVKE 231
>Z81449-10|CAB03766.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQ-RIALYDSIESLKELNKK 352
A+Q + + ENL + ++K + L ++ ++ +Q R+ + + +E ++ L K
Sbjct: 170 ALQKDVDTYQCQVENLQNSIEKLIRQNEEL--LRKNASLQKQGRMIVEEKMEVVRRLEKT 227
Query: 353 EGDDSEIKKMIKE 391
E + E+KK++KE
Sbjct: 228 EESNIELKKLVKE 240
>Z48241-6|CAD44100.2| 410|Caenorhabditis elegans Hypothetical
protein C32A3.3b protein.
Length = 410
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQ-RIALYDSIESLKELNKK 352
A+Q + + ENL + ++K + L ++ ++ +Q R+ + + +E ++ L K
Sbjct: 161 ALQKDVDTYQCQVENLQNSIEKLIRQNEEL--LRKNASLQKQGRMIVEEKMEVVRRLEKT 218
Query: 353 EGDDSEIKKMIKE 391
E + E+KK++KE
Sbjct: 219 EESNIELKKLVKE 231
>Z48241-5|CAA88286.4| 419|Caenorhabditis elegans Hypothetical
protein C32A3.3a protein.
Length = 419
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQ-RIALYDSIESLKELNKK 352
A+Q + + ENL + ++K + L ++ ++ +Q R+ + + +E ++ L K
Sbjct: 170 ALQKDVDTYQCQVENLQNSIEKLIRQNEEL--LRKNASLQKQGRMIVEEKMEVVRRLEKT 227
Query: 353 EGDDSEIKKMIKE 391
E + E+KK++KE
Sbjct: 228 EESNIELKKLVKE 240
>U41552-9|AAC69098.2| 1061|Caenorhabditis elegans Hypothetical protein
K07E3.1 protein.
Length = 1061
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +2
Query: 263 LQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEAAIYLK 412
+ EI N++E ++ ++DS++ L EL+ E + I K +++ +YL+
Sbjct: 887 ITEIDENANMVE-KLLMFDSLKKLDELDLSEVERGSIVKGLEDMKKMYLR 935
>U41992-9|AAK93854.1| 294|Caenorhabditis elegans Hypothetical
protein F32E10.7 protein.
Length = 294
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/62 (20%), Positives = 31/62 (50%)
Frame = +2
Query: 167 SDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELN 346
++ I + L E +NL+ + + +E +R+ ++ ++ R DSIE +E++
Sbjct: 38 TEEEIADAINRLSPEQQNLIQDVLRRAESSRKEAKVVVDAEMMRSRFRQRDSIEDSQEID 97
Query: 347 KK 352
+
Sbjct: 98 HR 99
>Z83129-4|CAB05642.1| 379|Caenorhabditis elegans Hypothetical
protein W06G6.7 protein.
Length = 379
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/87 (18%), Positives = 42/87 (48%)
Frame = +2
Query: 137 RHCSHNIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALY 316
+H SH + + + + + + S++K+ + RR+++ + E+ + L
Sbjct: 9 KHLSHTLRLIKNKRTTSKWEDTISRISEKASQIKQQKDMERRIRKQRGYELPEEKPVPLD 68
Query: 317 DSIESLKELNKKEGDDSEIKKMIKEEA 397
+ L +L K GD+ ++K M++ ++
Sbjct: 69 KDVRELIDLEKYIGDE-DLKSMVRHKS 94
>Z73897-3|CAE18053.1| 178|Caenorhabditis elegans Hypothetical
protein ZK617.4 protein.
Length = 178
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -3
Query: 540 SSFANNIASCPPAPAVSSKSTPPSVNGGSRRI 445
SS + + PP + S S+P S NGG RR+
Sbjct: 33 SSSSRRLPPRPPLESSHSASSPSSSNGGPRRM 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,969,695
Number of Sequences: 27780
Number of extensions: 188972
Number of successful extensions: 734
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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