Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0377
(596 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47020.1 68415.m05875 peptide chain release factor, putative ... 56 2e-08
At2g47020.2 68415.m05874 peptide chain release factor, putative ... 54 7e-08
At3g62910.1 68416.m07067 peptide chain release factor, putative ... 50 2e-06
At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR... 39 0.002
At5g36170.3 68418.m04360 peptide chain release factor, putative ... 36 0.027
At5g36170.2 68418.m04359 peptide chain release factor, putative ... 36 0.027
At5g36170.1 68418.m04358 peptide chain release factor, putative ... 36 0.027
At3g22590.1 68416.m02854 RNA pol II accessory factor Cdc73 famil... 33 0.19
At4g36120.1 68417.m05141 expressed protein 32 0.25
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 32 0.33
At1g56660.1 68414.m06516 expressed protein 32 0.33
At3g10180.1 68416.m01219 kinesin motor protein-related similar t... 31 0.44
At5g03140.1 68418.m00262 lectin protein kinase family protein co... 30 1.3
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 30 1.3
At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam PF05... 29 1.8
At1g05150.1 68414.m00518 calcium-binding EF hand family protein ... 29 2.4
At1g03290.1 68414.m00307 expressed protein ESTs gb|H36966, gb|R6... 29 2.4
At2g45200.1 68415.m05628 Golgi SNARE 12 protein / Golgi SNAP rec... 29 3.1
At1g56350.1 68414.m06479 peptide chain release factor, putative ... 29 3.1
At5g35390.1 68418.m04206 leucine-rich repeat transmembrane prote... 28 4.1
At5g04780.1 68418.m00494 SEC14 cytosolic factor-related contains... 28 4.1
At2g13790.1 68415.m01522 leucine-rich repeat family protein / pr... 28 4.1
At5g22360.1 68418.m02609 synaptobrevin family protein similar to... 27 7.2
At4g12170.1 68417.m01934 thioredoxin family protein similar to S... 27 7.2
At1g75170.1 68414.m08731 SEC14 cytosolic factor family protein /... 27 9.5
>At2g47020.1 68415.m05875 peptide chain release factor, putative
similar to peptide chain release factor 1 [Escherichia
coli] GI:147567; contains Pfam profiles PF00472:
Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain
Length = 413
Score = 55.6 bits (128), Expect = 2e-08
Identities = 36/134 (26%), Positives = 65/134 (48%)
Frame = +2
Query: 191 LKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSE 370
L+ L+ + E + ++++E R+L++ ++N L + D ++SL + + D +
Sbjct: 70 LQKLINQPEYSPEEFSRANKELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLD 129
Query: 371 IKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXTEGGVLLELTAGAGGQEAMLFAKELLNM 550
+ +EA KR E +LE+ AG GG+EA LFA ++ M
Sbjct: 130 LAVGELDEAVEEEKRLQTLLLKSLLPKDEAD--ERDCILEVRAGTGGEEASLFAMDIFRM 187
Query: 551 YQSYAINKGWEVDI 592
Y+ Y+ KGW+ DI
Sbjct: 188 YERYSQKKGWKFDI 201
>At2g47020.2 68415.m05874 peptide chain release factor, putative
similar to peptide chain release factor 1 [Escherichia
coli] GI:147567; contains Pfam profiles PF00472:
Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain
Length = 348
Score = 54.0 bits (124), Expect = 7e-08
Identities = 33/121 (27%), Positives = 59/121 (48%)
Frame = +2
Query: 230 KMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEAAIYL 409
+ ++++E R+L++ ++N L + D ++SL + + D ++ +EA
Sbjct: 18 EFSRANKELRKLRDSMLLINDLRAKQKEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEE 77
Query: 410 KRXXXXXXXXXXXXXXXXXTEGGVLLELTAGAGGQEAMLFAKELLNMYQSYAINKGWEVD 589
KR E +LE+ AG GG+EA LFA ++ MY+ Y+ KGW+ D
Sbjct: 78 KRLQTLLLKSLLPKDEAD--ERDCILEVRAGTGGEEASLFAMDIFRMYERYSQKKGWKFD 135
Query: 590 I 592
I
Sbjct: 136 I 136
>At3g62910.1 68416.m07067 peptide chain release factor, putative
similar to peptide chain release factor 1 [Escherichia
coli] GI:147567; contains Pfam profiles PF00472:
Peptidyl-tRNA hydrolase domain, PF03462: PCRF domain
Length = 422
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Frame = +2
Query: 218 NLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEA 397
+++S + + A+ + E+ +V V + + K L K+ GDD ++ +MI E
Sbjct: 79 DVVSNQSEYQKLAQSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDMAEMIGSEI 138
Query: 398 AIYLKRXXXXXXXXXXXXXXXXXTEG-GVLLELTAGAGGQEAMLFAKELLNMYQSYAINK 574
K + +LLE+ AG GG EA ++ +L+ MYQ Y+
Sbjct: 139 NSLTKEIEELEKQLKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVRMYQRYSERS 198
Query: 575 GWE 583
W+
Sbjct: 199 SWK 201
>At3g04220.1 68416.m00446 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 896
Score = 39.1 bits (87), Expect = 0.002
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Frame = +2
Query: 53 LADLTMPFPKLLFLRSFLNSERQLLHFRRHCSHNIMNLSDPAIQTYLKHLMVEHENLLSK 232
L L MP+ KL L + R L CS N+ L D + T L+ L +E + L K
Sbjct: 676 LVKLCMPYSKLEKLWEGIQPLRNLEWLDLTCSRNLKELPDLSTATNLQRLSIERCSSLVK 735
Query: 233 MKKSSEEARRLQEI--KPIVNVLEQRIALYDSIESLKELNKKE 355
+ S EA L++I + ++++E + + ++ +L+EL+ +E
Sbjct: 736 LPSSIGEATNLKKINLRECLSLVELP-SSFGNLTNLQELDLRE 777
>At5g36170.3 68418.m04360 peptide chain release factor, putative
similar to SP|P28367 Peptide chain release factor 2
(RF-2) {Bacillus subtilis}; contains Pfam profiles
PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF
domain
Length = 391
Score = 35.5 bits (78), Expect = 0.027
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 7/141 (4%)
Frame = +2
Query: 191 LKHLMVEHENLLSKMKKSS--EEARRLQEIKPIVNVLEQRIALYDSIESLKE-----LNK 349
L+ L E NL SK +S ++ + QE +N L+ R+ L +++ E +
Sbjct: 104 LQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKL 163
Query: 350 KEGDDSEIKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXTEGGVLLELTAGAGGQEAMLF 529
E DS +++E I + + G ++ +TAGAGG +A +
Sbjct: 164 TEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDW 223
Query: 530 AKELLNMYQSYAINKGWEVDI 592
A LL MY + + ++ +
Sbjct: 224 ADMLLRMYMRWGEKQRYKTKV 244
>At5g36170.2 68418.m04359 peptide chain release factor, putative
similar to SP|P28367 Peptide chain release factor 2
(RF-2) {Bacillus subtilis}; contains Pfam profiles
PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF
domain
Length = 455
Score = 35.5 bits (78), Expect = 0.027
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 7/141 (4%)
Frame = +2
Query: 191 LKHLMVEHENLLSKMKKSS--EEARRLQEIKPIVNVLEQRIALYDSIESLKE-----LNK 349
L+ L E NL SK +S ++ + QE +N L+ R+ L +++ E +
Sbjct: 103 LQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKL 162
Query: 350 KEGDDSEIKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXTEGGVLLELTAGAGGQEAMLF 529
E DS +++E I + + G ++ +TAGAGG +A +
Sbjct: 163 TEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDW 222
Query: 530 AKELLNMYQSYAINKGWEVDI 592
A LL MY + + ++ +
Sbjct: 223 ADMLLRMYMRWGEKQRYKTKV 243
>At5g36170.1 68418.m04358 peptide chain release factor, putative
similar to SP|P28367 Peptide chain release factor 2
(RF-2) {Bacillus subtilis}; contains Pfam profiles
PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF
domain
Length = 456
Score = 35.5 bits (78), Expect = 0.027
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 7/141 (4%)
Frame = +2
Query: 191 LKHLMVEHENLLSKMKKSS--EEARRLQEIKPIVNVLEQRIALYDSIESLKE-----LNK 349
L+ L E NL SK +S ++ + QE +N L+ R+ L +++ E +
Sbjct: 104 LQQLEQEITNLESKATDTSFWDDRTKAQETLSSLNDLKDRMRLLSEFKTMVEDAETIVKL 163
Query: 350 KEGDDSEIKKMIKEEAAIYLKRXXXXXXXXXXXXXXXXXTEGGVLLELTAGAGGQEAMLF 529
E DS +++E I + + G ++ +TAGAGG +A +
Sbjct: 164 TEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDW 223
Query: 530 AKELLNMYQSYAINKGWEVDI 592
A LL MY + + ++ +
Sbjct: 224 ADMLLRMYMRWGEKQRYKTKV 244
>At3g22590.1 68416.m02854 RNA pol II accessory factor Cdc73 family
protein contains Pfam PF05179: RNA pol II accessory
factor, Cdc73 family
Length = 415
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2
Query: 176 AIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESL 334
A+ Y+K+ ++H + K+S A L + KP+++ L R+A DSI+ L
Sbjct: 54 ALVHYVKNQQLKHGEYMQSTVKNSVPAVTLPDRKPLLDYLTGRVASSDSIDFL 106
>At4g36120.1 68417.m05141 expressed protein
Length = 981
Score = 32.3 bits (70), Expect = 0.25
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Frame = +2
Query: 83 LLFLRSFLNSERQLLHFRRHCSHNIMNLSDPAIQTYLK---HLMVEHENL---LSKMKKS 244
LLF S N HC N++N D + ++ LK L +E EN+ LS+ ++
Sbjct: 708 LLFEESDSNPLGDTFAKTDHCVDNLINGDDSSCKSLLKEVEQLKLEKENIAVELSRCLQN 767
Query: 245 SEEARR-LQEIKPIVNVLEQRIALYDSIESLKELNKK 352
E + L+E + +++ L+ ++ + ++SL E K
Sbjct: 768 LESTKAWLEEKEQLISKLKSQLTSSEDLQSLAETQLK 804
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/66 (27%), Positives = 37/66 (56%)
Frame = +2
Query: 191 LKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSE 370
+ + E +L+K EE+ +EIK ++ V E ++ D E+L ++KEG ++
Sbjct: 391 MSYCCFEAFKVLAKNYLDVEESEMFEEIKRLLEVEEIKMTPADVGENLLPKSEKEGGETC 450
Query: 371 IKKMIK 388
+K++I+
Sbjct: 451 LKRLIE 456
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 31.9 bits (69), Expect = 0.33
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = +2
Query: 230 KMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEE 394
K KKS + + ++E K N LE + D E KKE DD+E KK K E
Sbjct: 366 KEKKSEKGEKDVKEDKKKENPLETEVMSRDIKLEEPEAEKKEEDDTEEKKKSKVE 420
>At3g10180.1 68416.m01219 kinesin motor protein-related similar to
centromere protein E GB:4502781 [Homo sapiens]
Length = 1348
Score = 31.5 bits (68), Expect = 0.44
Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +2
Query: 140 HCSHNIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYD 319
HC +++NL DP +K L E N+L K SS R L ++ ++ EQ I +
Sbjct: 578 HCEEHVVNLRDPEAILLIKQLQ-EKINMLELEKSSSN--RNLDDL--VMVATEQNICARE 632
Query: 320 SIESLKELNKKEGDDSEI--KKMIKEEAAI 403
++E +++++ ++++ +E+ +
Sbjct: 633 KFAEIQEEIHAAREEAQVAREQLVSKESEV 662
>At5g03140.1 68418.m00262 lectin protein kinase family protein
contains Pfam domains, PF00138: Legume lectins alpha
domain, PF00139: Legume lectins beta domain and PF00069:
Protein kinase domain
Length = 711
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 558 DWYMFKSSFANNIASCPPAPAVSSKSTPPS 469
DW+ F SSF + S PP P S+P S
Sbjct: 255 DWWSFSSSFEESSESPPPMPNSPPPSSPSS 284
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 215 ENLLSKMKKSSEEARRLQEIKPIVNVLEQRIA-LYDSIESLKELNKKEGDDSE--IKKMI 385
E L M K E RR+QE V E I L +++ESL+ +++GD+ E ++KM
Sbjct: 307 EMLEEYMSKMEETERRMQETGKDVASRESAIVDLEETVESLRNEVERKGDEIESLMEKMS 366
Query: 386 KEEAAIYL 409
E + L
Sbjct: 367 NIEVKLRL 374
>At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam
PF05794: T-complex protein 11
Length = 1131
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +2
Query: 65 TMPFPKLLFLRSFLNSERQL------LHFRRHCSHNIMNLSDPAIQTYLKHLMVEHENLL 226
++PF +L L LN+ + + L R S N+ +S P+I + HL+
Sbjct: 317 SLPFEQLAMLLESLNTLKTVKSLLDRLEIRLEASKNVTTVSQPSILDNIDHLLKRVATPR 376
Query: 227 SKMKKSSEEARRLQEIKPIVNV 292
K S+ +R+ +++ + NV
Sbjct: 377 RKATPSTLRSRKGKKVSSVRNV 398
>At1g05150.1 68414.m00518 calcium-binding EF hand family protein low
similarity to O-linked GlcNAc transferase [Homo sapiens]
GI:2266994; contains Pfam profiles PF00036: EF hand,
PF00515: TPR Domain
Length = 808
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 245 SEEARR-LQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDS 367
+EEA+R L+E + N R+ L+D+I LK L KK+G ++
Sbjct: 462 TEEAKRALKEALKLTN----RVELHDAISHLKHLQKKKGKNN 499
>At1g03290.1 68414.m00307 expressed protein ESTs gb|H36966,
gb|R65511, gb|T42324 and gb|T20569 come from this gene
Length = 571
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +2
Query: 200 LMVEHENLLSKMKKSSEEARR-LQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIK 376
L E + L +++ SEE + L + + LE R+A ++ E KK+ +DS +K
Sbjct: 369 LATEVKELENRLLNLSEERNKSLAILDEMRGSLEIRLAAALELKKTAEKEKKDKEDSALK 428
Query: 377 KMIKEEA 397
+ ++EA
Sbjct: 429 ALAEQEA 435
>At2g45200.1 68415.m05628 Golgi SNARE 12 protein / Golgi SNAP
receptor complex member 1 identical to Probable 28 kDa
Golgi SNARE protein (Golgi SNAP receptor complex member
1) (SP:O22151) {Arabidopsis thaliana}
Length = 239
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 209 EHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKEL 343
EH LLS ++ E + + P V VL +R +++ SI + ++
Sbjct: 124 EHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDV 168
>At1g56350.1 68414.m06479 peptide chain release factor, putative
similar to SP|P28353 Peptide chain release factor 2
(RF-2). {Salmonella typhi}; contains Pfam profiles
PF00472: Peptidyl-tRNA hydrolase domain, PF03462: PCRF
domain
Length = 482
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 485 LELTAGAGGQEAMLFAKELLNMYQSYAINKGWEVDI 592
+E+ AGAGG E+ +A ++ MY+++A + + V +
Sbjct: 238 IEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTV 273
>At5g35390.1 68418.m04206 leucine-rich repeat transmembrane protein
kinase, putative receptor-like protein kinase PRK1,
Lycopersicon esculentum, PIR:T07865
Length = 657
Score = 28.3 bits (60), Expect = 4.1
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +2
Query: 293 LEQRIALYDSIESLKELNKKEGDDSE 370
+E+R+ + ++E ++EL ++EGDD +
Sbjct: 607 VEKRLDIGQAVEKIEELKEREGDDDD 632
>At5g04780.1 68418.m00494 SEC14 cytosolic factor-related contains
Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; contains Pfam profile PF01535:
PPR repeat (three copies)
Length = 864
Score = 28.3 bits (60), Expect = 4.1
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +2
Query: 149 HNIMNLSDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIE 328
H M + A + ++ V +N + K++ +++E+K ++ L R +LY S
Sbjct: 591 HEFMKAASMATRRFIIVRDVNRQN--EEHNKAALREAKIKELKALIGQLSGRSSLYCSDA 648
Query: 329 SLKE-LNKKEGDDSEIKKMIKE 391
LK L + + + KKM +E
Sbjct: 649 CLKRYLEARNWNVGKAKKMFEE 670
>At2g13790.1 68415.m01522 leucine-rich repeat family protein /
protein kinase family protein
Length = 620
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 537 SFANN-IASCPPAPAVSSKSTPPSVNGG 457
SFANN + P P S+ TPP +GG
Sbjct: 199 SFANNSLTDLPEPPPTSTSPTPPPPSGG 226
>At5g22360.1 68418.m02609 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 221
Score = 27.5 bits (58), Expect = 7.2
Identities = 22/115 (19%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Frame = +2
Query: 77 PKLLFLRSFLNSERQLLHFRRHCSHNIMNLSDPAIQTYLKHLMVE--HENLLSKMKKSSE 250
P++ R + +R + H R + +++ + +E H + K +
Sbjct: 38 PEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAH 97
Query: 251 EARRLQEIKPIVNVLEQRIALYDSIESLKELNKKEGDDSEIKKMIKEEAAIYLKR 415
A VL Q++ + S S+ LN+ G+ SEI+ ++ E ++R
Sbjct: 98 NAPAYAMNDEFSRVLHQQMEFFSSNPSVDTLNRVRGEVSEIRSVMVENIEKIMER 152
>At4g12170.1 68417.m01934 thioredoxin family protein similar to
SP|Q9SEU6 Thioredoxin M-type 4, chloroplast precursor
(TRX-M4) {Arabidopsis thaliana}; contains Pfam profile:
PF00085 Thioredoxin
Length = 128
Score = 27.5 bits (58), Expect = 7.2
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +2
Query: 167 SDPAIQTYLKHLMVEHENLLSKMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKELN 346
SDP I+ Y+ + H+ L+ + S + +Q P++ V + D E +
Sbjct: 7 SDPFIKAYVSSSLPSHDGLVQSLSASEWNSLVIQSKVPVIVVFIAK----DCAECGSLMP 62
Query: 347 KKEGDDSEIKKMIK 388
+ E DSE + M+K
Sbjct: 63 ELEFLDSEYEYMLK 76
>At1g75170.1 68414.m08731 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max}; similar to SEC14 cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis]
and to SEC14 cytosolic factor (SP:P53989) [Candida
glabrata]
Length = 296
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 230 KMKKSSEEARRLQEIKPIVNVLEQRIALYDSIESLKE-LNKKEGDDSEIKKMIKE 391
+ K+++ +++E+K ++ L R +LY S LK L + + + KKM++E
Sbjct: 13 EQKEAALREAKMKELKTLIGQLSGRNSLYCSDACLKRYLEARNWNVGKAKKMLEE 67
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,166,284
Number of Sequences: 28952
Number of extensions: 169291
Number of successful extensions: 750
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -