Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0375
(585 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0854 + 25400855-25403741,25406174-25407708 31 0.89
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 30 1.2
02_04_0233 - 21135743-21135867,21135970-21136340,21136486-211367... 30 1.2
12_02_0956 + 24776359-24779085 30 1.6
03_01_0222 - 1756769-1756801,1756889-1756917,1756975-1757859,175... 29 2.1
01_01_1024 + 8083372-8083758,8083970-8084149,8084261-8084590,808... 29 2.1
01_06_1355 + 36610390-36610479,36611906-36612063,36612144-366125... 29 3.6
04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414 28 4.8
02_01_0364 + 2615056-2615239,2615573-2615637,2616016-2616103,261... 28 4.8
02_01_0359 + 2578038-2578221,2578555-2578619,2583179-2583266,258... 28 4.8
01_06_1503 + 37813854-37813917,37814035-37814073,37814766-378149... 28 4.8
04_04_0733 + 27639581-27641257 28 6.3
03_02_1022 + 13260647-13260834,13260965-13261070,13262052-132621... 28 6.3
04_04_1425 + 33463039-33463330,33464370-33464460,33465299-334656... 27 8.3
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 27 8.3
01_01_0837 + 6533838-6534356 27 8.3
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 30.7 bits (66), Expect = 0.89
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +1
Query: 193 SRVTDIENETPSFSEDTFSKDDVFYNASSTSLGCAPVIPTSSQYGLAIVGQDNANNQIGS 372
S + DI+N ++D S + +S+S A +P+SS LA+V +++ Q
Sbjct: 886 STLLDIDNSLTLVADDAASSAQAAVDVASSSAQAAIDVPSSSV--LAVVDIPSSSAQAAI 943
Query: 373 SVPNSNNTEANDMHVSVTNAS 435
VP S A D+ S T +
Sbjct: 944 DVPASLAQAATDVASSSTQGA 964
>09_06_0048 +
20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +1
Query: 112 VTLGSRVSTDAGEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDDVFYNASSTSLG 291
+T G + + D+AD + E + ISR ENE + +D ++ + N +T+ G
Sbjct: 270 ITAGDKDVENGKADNADGVPEVNVVAISRDNSAENEAAAAGDDGADEEGIQMNVLNTTRG 329
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +1
Query: 268 NASSTSLGCAPVIPTSSQYGLAIVGQDNANNQIGSSVPNSNNTEANDM 411
N + S G T GLA+ Q NA +G PN NT N M
Sbjct: 1503 NNMNMSWGGTAQSATGYNMGLAMQAQPNAVPNMGWVTPNPGNTNMNMM 1550
>02_04_0233 -
21135743-21135867,21135970-21136340,21136486-21136757,
21137289-21137397,21137846-21138247,21138376-21138419,
21138539-21138759,21140163-21140274,21140620-21140754
Length = 596
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 121 GSRVSTDAGEDSADDLDESHTDDIS-RVTDIENETPSFSEDTFSKDD 258
G ST GE++A D+ ESHT D V IE+ T SE +D+
Sbjct: 211 GMHDSTIEGEEAAVDVSESHTTDHDIHVEAIEDLTAGVSEVKLPEDN 257
>12_02_0956 + 24776359-24779085
Length = 908
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 100 IITSVTLGSRVSTDAGEDSADDLDESHT--DDISRVTDIE-NETPSFSEDTFSKDDVFYN 270
+ TS + +D G DS+ D D + T ++ ++ E +P+FSED S++ + +
Sbjct: 454 VYTSAQVREAFESDPGRDSSSDRDGASTIFEETESISVGEVMRSPAFSEDCSSENSFWVD 513
Query: 271 ASSTSLG 291
+ LG
Sbjct: 514 VGQSPLG 520
>03_01_0222 - 1756769-1756801,1756889-1756917,1756975-1757859,
1758244-1759273,1759354-1759401,1759626-1760480
Length = 959
Score = 29.5 bits (63), Expect = 2.1
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Frame = +1
Query: 271 ASSTSLGCAPVIPTSSQYG----LAIVGQDNAN-NQIGSSVPNSNNTEAN-DMHVS--VT 426
+S++SLGC+ V T Q+G LA+ + + + NQ + + ++++ EA M V T
Sbjct: 755 SSNSSLGCSSVPKTQQQHGSAPQLAVKEEISMDENQCSTLIKSASHAEAELQMFVEERPT 814
Query: 427 NASAGSIINLIGNAKPQEGMKEIQEHVRNERFKVVKIESTE 549
L+ KP E M +Q+ R++ K+ I E
Sbjct: 815 MLFRSQSQVLLSEHKPIENMSNVQK-ARSDSLKIKAIYGEE 854
>01_01_1024 +
8083372-8083758,8083970-8084149,8084261-8084590,
8084679-8084792,8084942-8085682
Length = 583
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 331 AIVGQDNANNQIGSSVPNSNNTEANDMHVSVTNA 432
A G NANN ++ N+NNT +N+ + TN+
Sbjct: 547 AAAGNSNANNTNTNTTSNTNNTSSNNTTSNNTNS 580
>01_06_1355 +
36610390-36610479,36611906-36612063,36612144-36612523,
36612600-36613583,36614228-36614292,36614946-36615024,
36615480-36615529,36616595-36616781,36617922-36617957,
36619226-36619348,36619466-36620386,36620506-36620636
Length = 1067
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 220 TPSFSEDTFSKDDVFYNASSTSLGCAPVIPTSSQ 321
T + ++DT + V YN +ST PV+PT Q
Sbjct: 806 TMAVTDDTTATAIVHYNTTSTKKNATPVMPTMPQ 839
>04_04_0647 - 26928244-26928535,26931321-26931454,26932278-26933414
Length = 520
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 316 SQYGLAIVGQDNANNQIGSSVPNSNNTEANDMHVSVTNASAGSIINLIGNAKP 474
+ Y A+ D ++Q GSS +A+ +A+ GS+++L+ A+P
Sbjct: 407 ADYPFAVDDVDTPSSQPGSSDGKEARDQASSSSHKSQDAAVGSLVHLLKTARP 459
>02_01_0364 +
2615056-2615239,2615573-2615637,2616016-2616103,
2616202-2616269,2616653-2616703,2617168-2617285,
2617463-2617509,2617603-2617629,2617806-2617881,
2618157-2618296,2618623-2618721
Length = 320
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 142 AGEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDD 258
A D A D D + + + T +TP+ ED F KD+
Sbjct: 30 ASSDHAGDGDAAALNKGKKATPTRRKTPTSQEDAFDKDE 68
>02_01_0359 +
2578038-2578221,2578555-2578619,2583179-2583266,
2583365-2583432,2583816-2583866,2584331-2584448,
2584626-2584672,2584766-2584792,2584969-2585044,
2585320-2585483
Length = 295
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 142 AGEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDD 258
A D A D D + + + T +TP+ ED F KD+
Sbjct: 30 ASSDHAGDGDAAALNKGKKATPTRRKTPTSQEDAFDKDE 68
>01_06_1503 +
37813854-37813917,37814035-37814073,37814766-37814983,
37815629-37815684,37816787-37816850,37818796-37819163,
37819251-37820028
Length = 528
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/88 (23%), Positives = 39/88 (44%)
Frame = -1
Query: 570 PSTSCKRLGTFNFNNFETFISHMFLNFFHTFLRFSISYEINNATSTCVSDTDVHIIRFCV 391
P R FN+ NF + + N +++ ++S+ + A C++ T V++ F +
Sbjct: 168 PGARASRSSYFNWYNFSSSCGYAISNTAMSYVEDNVSWTVGFA--ACLATTAVYLPVFLL 225
Query: 390 ITIWH*TSYLIVGVVLADYRESVLRAGR 307
T + I G +LA + L A R
Sbjct: 226 GTAAYRAEQPIDGALLALLAKKSLSATR 253
>04_04_0733 + 27639581-27641257
Length = 558
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +1
Query: 295 APVIPTSSQYGLAIVGQDNANNQIGSSVPNSNNTEANDMHVSVTNASAGSIINLIGNAKP 474
+P IP+ A G NAN+ +G S + + EA+ V S +++ G P
Sbjct: 480 SPAIPSQRNKATATTGSQNANDAVGLSTAAAED-EADSTTVKRARLSDLKDVSMAGETTP 538
>03_02_1022 +
13260647-13260834,13260965-13261070,13262052-13262169,
13262271-13262539
Length = 226
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/71 (23%), Positives = 32/71 (45%)
Frame = +1
Query: 145 GEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDDVFYNASSTSLGCAPVIPTSSQY 324
GED +D DE TDD+ +++ ++ T + ++ LG + P S+ Y
Sbjct: 119 GEDVENDGDEMETDDLPE-PEVKTYEDGGTKITVTTSEITPEDDDEDLGPKRITPASTGY 177
Query: 325 GLAIVGQDNAN 357
V + +A+
Sbjct: 178 ANKSVSKKSAS 188
>04_04_1425 +
33463039-33463330,33464370-33464460,33465299-33465656,
33465771-33465944,33466403-33466607,33466717-33466784,
33467279-33467360,33467513-33467549,33467822-33467913,
33469219-33469294,33469402-33469585,33469859-33469867
Length = 555
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Frame = +1
Query: 100 IITSVTLGSRVSTDAGEDSADDLDESHTDDISRVTDIENETPSFSE-----DTFSKDD 258
+I+SV S +GE+ DD +E T+D NE+ E +TFS+D+
Sbjct: 73 VISSVLFSSPEEAASGEEEEDDDEEDETEDNHGAIVSYNESKLAIEEMVMKETFSRDE 130
>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
Length = 252
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 121 GSRVSTDAGEDSADDLDESHTD 186
GS S+ +GE +A D+D+ HTD
Sbjct: 41 GSLSSSSSGEAAAADVDDGHTD 62
>01_01_0837 + 6533838-6534356
Length = 172
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/67 (23%), Positives = 30/67 (44%)
Frame = +1
Query: 349 NANNQIGSSVPNSNNTEANDMHVSVTNASAGSIINLIGNAKPQEGMKEIQEHVRNERFKV 528
N +IGSS P+S A + + G + IG++KP+ + + + +
Sbjct: 29 NKGKKIGSSKPSSPAAPAEAASATAAAVAGGGVEAAIGSSKPKVSPRRAAQGGQRKGVVR 88
Query: 529 VKIESTE 549
VK+ T+
Sbjct: 89 VKVVLTK 95
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,861,674
Number of Sequences: 37544
Number of extensions: 293713
Number of successful extensions: 933
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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