Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0375
(585 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g27260.1 68416.m03407 DNA-binding bromodomain-containing prot... 36 0.020
At1g35660.1 68414.m04432 expressed protein 33 0.14
At5g20280.1 68418.m02414 sucrose-phosphate synthase, putative si... 30 0.99
At1g17900.1 68414.m02216 hypothetical protein 30 0.99
At1g80210.1 68414.m09387 expressed protein 30 1.3
At4g00920.1 68417.m00125 COP1-interacting protein-related simila... 29 1.7
At3g61380.1 68416.m06869 expressed protein 29 1.7
At3g45120.1 68416.m04870 hypothetical protein 29 1.7
At2g32460.1 68415.m03965 myb family transcription factor (MYB101... 29 1.7
At1g47260.1 68414.m05232 bacterial transferase hexapeptide repea... 29 1.7
At1g17780.2 68414.m02200 expressed protein 29 1.7
At1g17780.1 68414.m02201 expressed protein 29 1.7
At2g43650.1 68415.m05425 Sas10/U3 ribonucleoprotein (Utp) family... 29 2.3
At4g18250.1 68417.m02710 receptor serine/threonine kinase, putat... 29 3.0
At5g63980.1 68418.m08033 3'(2'),5'-bisphosphate nucleotidase / i... 28 4.0
At5g43590.1 68418.m05329 patatin, putative similar to patatin-li... 28 4.0
At5g07690.1 68418.m00882 myb family transcription factor (MYB29)... 28 4.0
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 4.0
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 28 5.3
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 28 5.3
At2g47850.1 68415.m05972 zinc finger (CCCH-type) family protein ... 28 5.3
At1g56080.1 68414.m06439 expressed protein 28 5.3
At5g44750.1 68418.m05485 UMUC-like DNA repair family protein / B... 27 7.0
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 27 7.0
At5g07980.1 68418.m00928 dentin sialophosphoprotein-related cont... 27 7.0
At5g02460.1 68418.m00173 Dof-type zinc finger domain-containing ... 27 7.0
At2g39170.1 68415.m04811 expressed protein 27 7.0
At5g61960.1 68418.m07777 RNA recognition motif (RRM)-containing ... 27 9.2
At4g31430.2 68417.m04465 expressed protein 27 9.2
At4g31430.1 68417.m04464 expressed protein 27 9.2
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 27 9.2
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 27 9.2
>At3g27260.1 68416.m03407 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 813
Score = 35.9 bits (79), Expect = 0.020
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 2/138 (1%)
Frame = +1
Query: 124 SRVSTDAG--EDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDDVFYNASSTSLGCA 297
S +D+G ED +DD D S++ + N E+T DD+F + ST G
Sbjct: 444 SSSDSDSGSSEDQSDDAKPMVQGDSSKMPETANSEAQRDENT-RIDDLFVGSQST--GAL 500
Query: 298 PVIPTSSQYGLAIVGQDNANNQIGSSVPNSNNTEANDMHVSVTNASAGSIINLIGNAKPQ 477
+ SQ L+ D + G+ + ++E + N A I+ PQ
Sbjct: 501 EQMDICSQQKLSSDESDGQHE--GNILETPASSEKRYRAALLKNRFADIILKAREKPLPQ 558
Query: 478 EGMKEIQEHVRNERFKVV 531
G+K E +R ER ++V
Sbjct: 559 NGIKGDPERLRKEREELV 576
>At1g35660.1 68414.m04432 expressed protein
Length = 1155
Score = 33.1 bits (72), Expect = 0.14
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +1
Query: 163 DLDESHTDDISRVTDIENETPSFSEDTFSKD 255
DL+E D ++ + D ENET +FSED F++D
Sbjct: 410 DLEEEALDPVT-IADHENETVTFSEDKFTED 439
>At5g20280.1 68418.m02414 sucrose-phosphate synthase, putative
similar to sucrose-phosphate synthase (EC 2.4.1.14)
isoform 1 - Citrus unshiu, EMBL:AB005023
Length = 1043
Score = 30.3 bits (65), Expect = 0.99
Identities = 31/114 (27%), Positives = 47/114 (41%)
Frame = +1
Query: 190 ISRVTDIENETPSFSEDTFSKDDVFYNASSTSLGCAPVIPTSSQYGLAIVGQDNANNQIG 369
+SR+T + P + D D+ + S SL I + ++ G DN NQ G
Sbjct: 662 LSRITSFKPRHPQWQSDD-GGDNSEPESPSDSLRDIQDISLNLKFSFDGSGNDNYMNQEG 720
Query: 370 SSVPNSNNTEANDMHVSVTNASAGSIINLIGNAKPQEGMKEIQEHVRNERFKVV 531
SS+ + EA +V N S G +G+ + E VR +F VV
Sbjct: 721 SSMDRKSKIEA-----AVQNWSKGKDSRKMGSLERSEVNSGKFPAVRRRKFIVV 769
>At1g17900.1 68414.m02216 hypothetical protein
Length = 184
Score = 30.3 bits (65), Expect = 0.99
Identities = 28/87 (32%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +1
Query: 79 LNYCVCEIITSVTLGSRVSTDAGEDSADD----LDESH--TDDISRVTD---IENETPSF 231
LN V I T TLG+ VS G+D+ D +DE++ D+ + D E+E
Sbjct: 33 LNLFVSFITTVKTLGNNVSRTHGDDAESDRVSNVDENNEAVDEQDNIEDDKTDEDEKEGD 92
Query: 232 SEDTFSKDDVFYNASSTSLGCAPVIPT 312
+ED DD Y S+G + + PT
Sbjct: 93 NEDGDGYDD--YQGDDESMGGSTLDPT 117
>At1g80210.1 68414.m09387 expressed protein
Length = 354
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/86 (27%), Positives = 34/86 (39%)
Frame = +1
Query: 235 EDTFSKDDVFYNASSTSLGCAPVIPTSSQYGLAIVGQDNANNQIGSSVPNSNNTEANDMH 414
E +FS D Y SS++ G P + TS + G NNTEAN+
Sbjct: 150 ESSFSSSDSIYQRSSSARGDNPELDTSDTATTS--GSKGGGRVSDFEAFFVNNTEANNTR 207
Query: 415 VSVTNASAGSIINLIGNAKPQEGMKE 492
T+ + S I + E M+E
Sbjct: 208 RDGTSGNYSSTAIEIDSMDMSESMQE 233
>At4g00920.1 68417.m00125 COP1-interacting protein-related similar
to COP1-interacting protein 4 (CIP4) [Arabidopsis
thaliana] GI:13160646
Length = 314
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 160 DDLDESHTDDISRVTDIENETPSFSEDTFSKDD 258
DD +ESH DD RV + N++ + +KDD
Sbjct: 182 DDENESHKDDDVRVVEDINQSADVENEGINKDD 214
>At3g61380.1 68416.m06869 expressed protein
Length = 718
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 97 EIITSVTLGSRVSTDAGEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDDVFYNAS 276
EI+ + S + EDS D D T D+S D NET + D S+ D
Sbjct: 372 EILQTPETSSATNDLIDEDSDKDDDTLFTIDVSVPRDYGNETENIDNDEESEIDPLSETC 431
Query: 277 STSL 288
S+S+
Sbjct: 432 SSSV 435
>At3g45120.1 68416.m04870 hypothetical protein
Length = 106
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 79 LNYCVCEIITSVTLGSRVSTDAGEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDD 258
LN V I T TLG+ VS G+D+ D ++ ++ +E +D +D+
Sbjct: 33 LNLFVSFITTVKTLGNNVSRTHGDDAESDCVCDSVSNVDENNEVVDEQDDVEDDKTDEDE 92
>At2g32460.1 68415.m03965 myb family transcription factor (MYB101)
identical to putative transcription factor MYB101
GI:18087348 from [Arabidopsis thaliana]
Length = 490
Score = 29.5 bits (63), Expect = 1.7
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Frame = +1
Query: 163 DLDESHTDDISRVTDIENETPSFSEDTFSKDDVFYNAS-----STSLGCAPVIPTSSQ-- 321
DLD +H + I + T+ N + S S + S ST+ G P IP SS
Sbjct: 157 DLDHNHQNMI-QYTNSSNTSSSSSSFSSSSSQPSKRLRPDPLVSTNPGLNP-IPDSSMDF 214
Query: 322 --YGLAIVGQDNANNQIGSSVPNSNNTEANDM 411
+ L +N NNQ G SVP S+++ +N++
Sbjct: 215 QMFSLYNNSLENDNNQFGFSVPLSSSSSSNEV 246
>At1g47260.1 68414.m05232 bacterial transferase hexapeptide
repeat-containing protein contains Pfam profile PF00132:
Bacterial transferase hexapeptide (four repeats)
Length = 278
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 229 FSEDTFSKDDVFYNASSTSLGCAPVIPTSS-QYGLAIVGQDNANNQIGSSVPNSNNTEAN 405
F + DVF S++ +G + SS YG + G N N +GS +NT
Sbjct: 49 FDKSPLVDKDVFVAPSASVIGDVQIGKGSSIWYGCVLRGDVN-NISVGSGTNIQDNTL-- 105
Query: 406 DMHVSVTNASAGSIINLIGN 465
+HV+ TN S + LIG+
Sbjct: 106 -VHVAKTNISGKVLPTLIGD 124
>At1g17780.2 68414.m02200 expressed protein
Length = 263
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1
Query: 109 SVTLGSRVSTDAGEDSADDLDESHTDDISRVTDIENETP-SFSEDTFSKDDVFYNASSTS 285
SV + ++ + D SHTD +S + ++TP SF DD F + S S
Sbjct: 55 SVLIDEKLEEYSDCDRTATTSRSHTDPVS--SQSTHQTPESFRTPITCDDDTFVSVSGIS 112
Query: 286 LGCAPVIPTSSQYGLAIVGQDNANNQ 363
+ +IP +++ + V + AN +
Sbjct: 113 RDVSNLIPFATETPASPVQEKMANTR 138
>At1g17780.1 68414.m02201 expressed protein
Length = 189
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +1
Query: 109 SVTLGSRVSTDAGEDSADDLDESHTDDISRVTDIENETP-SFSEDTFSKDDVFYNASSTS 285
SV + ++ + D SHTD +S + ++TP SF DD F + S S
Sbjct: 13 SVLIDEKLEEYSDCDRTATTSRSHTDPVS--SQSTHQTPESFRTPITCDDDTFVSVSGIS 70
Query: 286 LGCAPVIPTSSQYGLAIVGQDNANNQ 363
+ +IP +++ + V + AN +
Sbjct: 71 RDVSNLIPFATETPASPVQEKMANTR 96
>At2g43650.1 68415.m05425 Sas10/U3 ribonucleoprotein (Utp) family
protein contains Pfam profile PF04000: Sas10/Utp3
family; contains Prosite PS00761: Signal peptidases I
signature 3; weak similarity to PEBP2 beta-binding
protein / charged amino acid rich leucine zipper
factor-1 (GI:12061569) [Mus musculus]
Length = 654
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 151 DSADDLDESHTDDISRVTDIENETPSFSEDTFSKDD 258
D DD DES DD+ V D++ ED ++D+
Sbjct: 43 DVNDDTDESDEDDVQPVFDLQGVDDESEEDEDTEDE 78
>At4g18250.1 68417.m02710 receptor serine/threonine kinase, putative
similar to to receptor serine/threonine kinase PR5K
gi|1235680|gb|AAC49208
Length = 853
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = -1
Query: 471 FSISYEINNATSTCVSDTDVHIIRFCVITIWH*TS 367
+S + NN+T TC + TD ++I FC +I + TS
Sbjct: 411 YSYPFSGNNSTFTCTNSTD-YVITFCPSSIPNTTS 444
>At5g63980.1 68418.m08033 3'(2'),5'-bisphosphate nucleotidase /
inositol polyphosphate 1-phosphatase / FIERY1 protein
(FRY1) (SAL1) identical to SP|Q42546
3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)
(3'(2'),5- bisphosphonucleoside 3'(2')-phosphohydrolase)
(DPNPase) {Arabidopsis thaliana}; identical to cDNA
inositol polyphosphate 1-phosphatase FIERY1 (FRY1)
GI:15281147
Length = 353
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +1
Query: 142 AGEDSADDLDESHTDDISRVTDIENET----PSFSEDTFSKDDV 261
A EDS D + D + R+T + N+T SF+ T S DD+
Sbjct: 70 AEEDSGDLRKDGSQDTLERITKLVNDTLATEESFNGSTLSTDDL 113
>At5g43590.1 68418.m05329 patatin, putative similar to patatin-like
latex allergen [Hevea brasiliensis][PMID:10589016];
contains patatin domain PF01734
Length = 401
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 151 DSADDLDESHTDDISRVTDIENETPSFSEDTFSKDDVFYNASST 282
+S+ D+ + HT + + + E+ DT KD+VF + S T
Sbjct: 289 ESSRDMVQYHTSVLFQALESEDNYLRIDADTLKKDEVFMDDSET 332
>At5g07690.1 68418.m00882 myb family transcription factor (MYB29)
similar to myb transcription factor GI:3941436 from
[Arabidopsis thaliana]
Length = 336
Score = 28.3 bits (60), Expect = 4.0
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = +1
Query: 136 TDAGEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDDVFYNASSTSLGCAPVIPTS 315
+ +G S L S + ++ +T +ETP + SK F +SSTS V +
Sbjct: 139 SQSGSISPKSLPPSSSKNVPEITS-SDETPKYDASLSSKKRCFKRSSSTSKLLNKVAARA 197
Query: 316 SQYGLAIVGQDNANNQIGSSVPNSN 390
S G I+G I SS P S+
Sbjct: 198 SSMG-TILGASIEGTLI-SSTPLSS 220
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +1
Query: 82 NYCVCEIITSVTLGSRVSTDAGEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDDV 261
N V + ++ +GS ST +G + + +D S+ VTD + P S TFS +
Sbjct: 287 NVTVFDASSNGFVGSLPSTLSGLANVEQMDFSYNKFTGFVTDNICKLPKLSNFTFSYN-- 344
Query: 262 FYNASSTSLGCAPVIPTSSQY 324
F+N + S C P Q+
Sbjct: 345 FFNGEAQS--CVPGSSQEKQF 363
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 148 EDSADDLDESHTDDIS-RVTDIENETPSFSEDTFSKDD 258
ED +DD DES DD S + D++ + E+ S+D+
Sbjct: 74 EDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSEDE 111
>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 306
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 148 EDSADDLDESHTDDIS-RVTDIENETPSFSEDTFSKDD 258
ED +DD DES DD S + D++ + E+ S+D+
Sbjct: 157 EDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSEDE 194
>At2g47850.1 68415.m05972 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 468
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 265 YNASSTSLGCAPV--IPTSSQYG-LAIVGQDNANNQIGSSVPNSNNTEANDMHVSVTNAS 435
YN S++SL APV P SS G LA ++ I ++ T S +N S
Sbjct: 367 YNPSASSLADAPVAPYPVSSLLGALAAAPSSSSTELIAGGAKDAYMTGVPTSR-STSNIS 425
Query: 436 AGSIINLIGNAKP 474
AG I + G + P
Sbjct: 426 AGLIFSQSGGSIP 438
>At1g56080.1 68414.m06439 expressed protein
Length = 310
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 11/97 (11%)
Frame = +1
Query: 145 GEDSADDLDESHTDDISRVTDIENETPSFSE-----------DTFSKDDVFYNASSTSLG 291
G+D + S+ + +S ++ TP FS T + + ASS L
Sbjct: 144 GKDENSNGSYSNNEGLSEARQRQSMTPQFSPAFTPSGTPKILSTAASPRSYSAASSPKLF 203
Query: 292 CAPVIPTSSQYGLAIVGQDNANNQIGSSVPNSNNTEA 402
PTSS Y + + + + + +S P S++ A
Sbjct: 204 SGAASPTSSHYDIRMWSSTSQQSSVANSPPRSHSVSA 240
>At5g44750.1 68418.m05485 UMUC-like DNA repair family protein / BRCT
domain-containing protein low similarity to Rev1S [Homo
sapiens] GI:12483635; contains Pfam profiles PF00817:
ImpB/MucB/SamB family, PF00533: BRCA1 C Terminus (BRCT)
domain
Length = 1102
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 121 GSRVSTDAGEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKD 255
GS + D E++ D +D D+I V IEN TP +E T + D
Sbjct: 217 GSSIRADDSEEARDHID----DEIDGVY-IENTTPELTEQTGTGD 256
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 27.5 bits (58), Expect = 7.0
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -2
Query: 572 IHRPLVNGSVLSILTTLKRSFLTCS*ISFIPS*GLAFPMRLIMLPALALVTLTCI 408
+H L NG+++S+ + +FLT I F+ G P +I +P+ +LTC+
Sbjct: 298 VHCGLRNGAIVSVDLRERPAFLTSHNILFLQLQGNINPSHVIYMPS----SLTCL 348
>At5g07980.1 68418.m00928 dentin sialophosphoprotein-related
contains weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 1501
Score = 27.5 bits (58), Expect = 7.0
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 310 TSSQYGLAIVGQDNA---NNQIGSSVPNSNNTEANDMHVSVTNASAGS 444
TS +G+A G D+ NN + ++P+ N+ + + + S ++ +AGS
Sbjct: 620 TSYGFGIAGAGNDSRHLDNNSLEKAIPHLNSRDGSQILESYSSNNAGS 667
>At5g02460.1 68418.m00173 Dof-type zinc finger domain-containing
protein zinc finger protein OBP3, Arabidopsis thaliana,
EMBL:AF155818
Length = 399
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +1
Query: 184 DDISRVTDIENETPSFSEDT----FSKDDVFYNASSTSLGCAPVIPTSSQYGLAIVGQDN 351
D + +E + P + T + ++F+N S+S + + T++ LA V ++
Sbjct: 289 DPFDQQHQMEQQNPGYGLVTGSGQYRPKNIFHNLISSSSSASSAMVTATASQLASVKMED 348
Query: 352 ANNQIGSS 375
+NNQ+ S
Sbjct: 349 SNNQLNLS 356
>At2g39170.1 68415.m04811 expressed protein
Length = 231
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 427 NASAGSIINLIGNAKPQEGMKEIQEHVRNERFKVVKIES 543
N S +I I N +P G+ IQ+H+RN V+ + +
Sbjct: 14 NESLAEMIKYIAN-EPSVGLYYIQQHIRNAAPNVINLNN 51
>At5g61960.1 68418.m07777 RNA recognition motif (RRM)-containing
protein Mei2-like protein, Arabidopsis thaliana,
EMBL:D86122
Length = 915
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 118 LGSRVSTDAGEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDD 258
+GS + + G+ + +D ++ IS V++ ETP+ D F K++
Sbjct: 870 MGSNIRSRPGKPRSSSIDNYNSFSISSVSENREETPN-GTDPFLKEN 915
>At4g31430.2 68417.m04465 expressed protein
Length = 574
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 118 LGSRVSTDAGEDSADDLDESHTDDISRVTDIENETPSFSED 240
+ S V +D+ S +D D S DI D+E P F+E+
Sbjct: 70 ISSVVFSDSSSSSEEDEDSS--SDIDGDEDVEKNNPDFTEE 108
>At4g31430.1 68417.m04464 expressed protein
Length = 485
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 118 LGSRVSTDAGEDSADDLDESHTDDISRVTDIENETPSFSED 240
+ S V +D+ S +D D S DI D+E P F+E+
Sbjct: 70 ISSVVFSDSSSSSEEDEDSS--SDIDGDEDVEKNNPDFTEE 108
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 136 TDAGEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDDVFYNASSTSLG 291
T +DS D+L+ SHTD +++ +E + S D + N S+TS G
Sbjct: 54 TATDDDSEDELEPSHTD-----SNVVSEVVNVSSGVKEIDLLVRNESTTSSG 100
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 136 TDAGEDSADDLDESHTDDISRVTDIENETPSFSEDTFSKDDVFYNASSTSLG 291
T +DS D+L+ SHTD +++ +E + S D + N S+TS G
Sbjct: 54 TATDDDSEDELEPSHTD-----SNVVSEVVNVSSGVKEIDLLVRNESTTSSG 100
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,092,070
Number of Sequences: 28952
Number of extensions: 240503
Number of successful extensions: 795
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1151426952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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