Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0367
(688 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0297 - 20578031-20578080,20578162-20578236,20578317-205784... 90 2e-18
01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,398... 38 0.010
08_02_1345 - 26286448-26286679,26287483-26288038,26288068-262883... 34 0.092
08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224 34 0.092
03_01_0658 + 4818401-4818540,4818605-4819201,4819694-4819949,482... 33 0.16
07_03_0204 - 15150854-15151147,15152230-15153689,15154055-151542... 33 0.28
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 32 0.37
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 32 0.49
02_04_0319 - 22006550-22006952,22007260-22007441,22007522-220077... 31 0.86
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 30 1.5
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 30 2.0
09_04_0652 - 19227686-19227926,19229368-19232294 30 2.0
06_01_0588 - 4224348-4224516,4224674-4224767,4224872-4225490,422... 29 2.6
03_06_0285 + 32848085-32848988,32849057-32849245,32850136-328503... 29 2.6
03_01_0641 - 4697273-4697672,4697921-4698102,4698218-4698403,469... 29 2.6
03_01_0340 - 2680860-2682197 29 2.6
02_05_1059 + 33815979-33816235,33816467-33816732,33817149-338171... 29 2.6
05_06_0033 + 25074301-25074393,25074680-25075203,25076367-250764... 29 3.5
04_04_0075 - 22542486-22542882,22543181-22543362,22543452-225436... 29 3.5
04_03_0785 + 19619062-19619532,19620047-19621012 29 4.6
08_02_1343 - 26274788-26275019,26275972-26276611,26277174-262783... 28 6.0
04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632 28 6.0
02_02_0159 + 7299685-7300572 28 8.0
>01_05_0297 -
20578031-20578080,20578162-20578236,20578317-20578416,
20578476-20578535,20578833-20578907,20578989-20579069,
20579596-20579665,20579769-20579833,20580008-20580116,
20580812-20580876,20580964-20581023,20582008-20582134,
20582215-20582315,20583209-20583316,20583429-20583464,
20583569-20583714,20585555-20585564
Length = 445
Score = 89.8 bits (213), Expect = 2e-18
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Frame = +2
Query: 2 ELCTPELQERLTPMRNKFKELEDAK----VQSSLSSGNKSHGDSSKAKKKRVLPYWFEND 169
+ C+ EL+++L R ++ E+AK Q SS ++ G S + PY+ +
Sbjct: 311 DFCSDELKQKLQAPRQMLRDAENAKFGLKAQGKASSSKENEGSSVSIQVACCDPYFNTFN 370
Query: 170 VGSNNSGYYRLQAVLTHRGRSSSSGHYVAWVARGAG-WLRCXXXXXXXXXXXXXLKLSGG 346
+ + +G Y L AVLTH+GRS+ SGHYV WV + G W+ LKLSGG
Sbjct: 371 L-KHLTGIYDLIAVLTHKGRSADSGHYVGWVKQDDGKWIEFDDDNPSIRKEEEILKLSGG 429
Query: 347 GDWHCAYLLLYGPKIL 394
GDWH AY+ LY +++
Sbjct: 430 GDWHMAYICLYKARVI 445
>01_01_0543 +
3985771-3985866,3985965-3986145,3986668-3986780,
3986854-3987190,3987602-3987603,3987661-3987743,
3988017-3988116,3988330-3988463,3988711-3988788,
3989333-3989387,3990159-3990239,3990369-3990567,
3990609-3990699,3990770-3990892,3991440-3991528,
3992450-3992539,3992619-3992792,3992911-3993035,
3993246-3993372,3993826-3993998
Length = 816
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 179 NNSGYYRLQAVLTHRGRSSSSGHYVAWVARGAGWL 283
+ SG Y+L A ++H G S+ GHYVA V + W+
Sbjct: 756 DGSGRYKLMAFVSHMGTSTHCGHYVAHVLKDGRWV 790
>08_02_1345 -
26286448-26286679,26287483-26288038,26288068-26288358,
26288953-26290516
Length = 880
Score = 34.3 bits (75), Expect = 0.092
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 182 NSGYYRLQAVLTHRGRSSSSGHYVAWV 262
++ YRL V+ H GR SGH+VA+V
Sbjct: 809 DNSIYRLAGVIEHHGRGKDSGHFVAYV 835
>08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224
Length = 787
Score = 34.3 bits (75), Expect = 0.092
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +2
Query: 77 VQSSLSSGNKSHGDSSKAKKKRVLPYWFENDVGSNNSGYYRLQAVLTHRGRSSSSGHYVA 256
++ SL +K G S + V + + V +NS YRL +V+ H G SGH+VA
Sbjct: 682 LKRSLLQSDKVKGHVSFKEILDVGLFMDPSSVDKDNS-IYRLASVIEHHGHGKDSGHFVA 740
Query: 257 WV 262
+V
Sbjct: 741 YV 742
>03_01_0658 +
4818401-4818540,4818605-4819201,4819694-4819949,
4820038-4820723,4821009-4821147,4821378-4821514,
4821805-4822077,4822175-4822382,4822660-4822731,
4823230-4823460,4824269-4824532,4825127-4825268,
4825355-4825467
Length = 1085
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +2
Query: 182 NSGY-YRLQAVLTHRGRSSSSGHYVAWV 262
+S Y Y L A+L H+G +++SGHYVA V
Sbjct: 358 SSSYTYGLSAILIHKGSAANSGHYVAHV 385
>07_03_0204 -
15150854-15151147,15152230-15153689,15154055-15154266,
15155123-15155275,15155569-15155630,15155733-15155785,
15156380-15156452,15156499-15156619,15156699-15156878,
15157333-15157391
Length = 888
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/38 (42%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 11 TPELQERLTPMRNKFKELEDA-KVQSSLSSGNKSHGDS 121
TPE+ ER+T + ++ +LEDA +QS+ + G +S GD+
Sbjct: 87 TPEVLERVTTIESEILQLEDAISIQSNDNLGLRSKGDA 124
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 32.3 bits (70), Expect = 0.37
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWV 262
YRL V+ H G S SGHYVA+V
Sbjct: 750 YRLVGVVEHLGHSMYSGHYVAYV 772
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 31.9 bits (69), Expect = 0.49
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWVARGAG-WLR 286
Y L A +TH G + S GHY A +G WLR
Sbjct: 622 YELVATITHLGANPSRGHYTADAKSASGQWLR 653
>02_04_0319 -
22006550-22006952,22007260-22007441,22007522-22007704,
22008144-22008242,22008999-22009115,22010476-22010739
Length = 415
Score = 31.1 bits (67), Expect = 0.86
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWVARGAGWL 283
Y L AV+ H G S + GHYV+ + WL
Sbjct: 341 YSLFAVVVHVGSSPNHGHYVSQIKSHGNWL 370
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWV 262
YRL V+ HRG + +GH++A+V
Sbjct: 727 YRLVGVVEHRGLGNDAGHFLAYV 749
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 173 GSNNSGYYRLQAVLTHRGRSSSSGHYVAWV 262
G S +YRL A+ H G S GHY A+V
Sbjct: 807 GQQISNHYRLYAISNHYG-SMGGGHYTAYV 835
>09_04_0652 - 19227686-19227926,19229368-19232294
Length = 1055
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 179 NNSGYYRLQAVLTHRGRSSSSGHYVAWVARG 271
N++ YRL V+ H G + ++GHYVA+V G
Sbjct: 980 NDNTTYRLVGVVEHLG-TMAAGHYVAYVRTG 1009
>06_01_0588 -
4224348-4224516,4224674-4224767,4224872-4225490,
4225609-4225734,4225819-4226487,4226728-4226853,
4226940-4227266,4227366-4227439,4228469-4228583,
4228871-4229164
Length = 870
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWVARGAG 277
Y L VL H G ++ SGHY +V +G
Sbjct: 276 YSLYGVLVHAGWNTQSGHYYCFVRTSSG 303
>03_06_0285 +
32848085-32848988,32849057-32849245,32850136-32850311,
32850569-32851141
Length = 613
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 17 ELQERLTPMRNKFKELEDAKVQSSLSSGNKSHGDSSKAKKKRV 145
E + L +R + +ELE AK + ++ + S G SS KR+
Sbjct: 447 EAEFPLEDLRERLEELEKAKTEKKKAASSSSSGGSSGPANKRI 489
>03_01_0641 -
4697273-4697672,4697921-4698102,4698218-4698403,
4699287-4699385,4700028-4700144,4700698-4700814
Length = 366
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 179 NNSGYYRLQAVLTHRGRSSSSGHYVAWVARGAGWL 283
N+ Y L AVL H G + GHY++ V WL
Sbjct: 288 NSDLEYSLFAVLVHVGSGPNHGHYISLVKSHNHWL 322
>03_01_0340 - 2680860-2682197
Length = 445
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 5 LCTPELQERLTPMRNKFKELEDAKVQ-SSLSSGNKSHGDSSKAKKKRVLPYWFENDVGSN 181
+C+ L ERL+ +RN +E E+ V+ + +G S D K +K +L + ++ +
Sbjct: 47 VCSTCLMERLSSVRNPAEEEEEEIVEVGTADAGEGSSADHGKLRKTLMLLFQLDDSCSGS 106
Query: 182 NSG 190
G
Sbjct: 107 AVG 109
>02_05_1059 +
33815979-33816235,33816467-33816732,33817149-33817192,
33817363-33817539,33817638-33817964,33818067-33818192,
33818518-33818622,33818815-33820125,33820221-33820382,
33820416-33820517,33820549-33821272,33821358-33821451,
33821824-33821986
Length = 1285
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWVARGAG 277
Y L VL H G ++ SGHY +V +G
Sbjct: 363 YSLYGVLVHAGWNTQSGHYYCFVRTSSG 390
>05_06_0033 +
25074301-25074393,25074680-25075203,25076367-25076442,
25076549-25076641,25077167-25077253,25077338-25078095,
25078447-25078575,25079145-25079265
Length = 626
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWVARGAG-WLRC 289
Y L + H G S SGHY A+V G W C
Sbjct: 268 YNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCC 300
>04_04_0075 -
22542486-22542882,22543181-22543362,22543452-22543637,
22543959-22544057,22546198-22546314,22547739-22547855
Length = 365
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +2
Query: 113 GDSSKAKKKRVLPYWFENDVGSNNSGYYRLQAVLTHRGRSSSSGHYVAWVARGAGWL 283
G K + V P + + Y L AV+ H G + GHYV+ V WL
Sbjct: 265 GRYKKLSYRVVFPMELKLSTSDDVDTEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWL 321
>04_03_0785 + 19619062-19619532,19620047-19621012
Length = 478
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2
Query: 395 ELPEQDEDEPMVTDITD 445
ELPEQDED PMV D
Sbjct: 317 ELPEQDEDSPMVPQSMD 333
>08_02_1343 -
26274788-26275019,26275972-26276611,26277174-26278367,
26278515-26278701
Length = 750
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWV 262
YRL + H G S +GHYVA+V
Sbjct: 683 YRLVGFVEHLGPSMYAGHYVAYV 705
>04_04_1365 - 32967604-32968367,32969097-32969221,32969583-32969632
Length = 312
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 167 DVGSNNSGYYRLQAVLTHRGRSSSSGHYVAWVARGAGWLRC 289
D S S + + AV+ H G+ + GHYV ++ W +C
Sbjct: 234 DSVSEFSSEFEIFAVIMHSGKLEA-GHYVTYLRLNNHWYKC 273
>02_02_0159 + 7299685-7300572
Length = 295
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
Frame = +2
Query: 38 PMRNKFKELEDA--KVQSSLSSGNKSHGDSSKAKKKRVL---PYWFENDVGSNNSGYY 196
P R + +E+E + SS + G G + ++ R Y F ND G+ SGYY
Sbjct: 104 PSRGRRREVEFSCSNTPSSTTGGGGGGGLLGRRRRNRHHRRDDYGFSNDAGAGGSGYY 161
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,593,976
Number of Sequences: 37544
Number of extensions: 314166
Number of successful extensions: 929
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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