Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0367
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 109 2e-24
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 109 2e-24
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 109 2e-24
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 37 0.016
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 37 0.016
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 34 0.11
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 33 0.14
AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical ... 33 0.25
AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical ... 33 0.25
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 32 0.44
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 30 1.3
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 30 1.8
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 30 1.8
AC006656-2|AAF39880.1| 326|Caenorhabditis elegans Hypothetical ... 29 3.1
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z99710-6|CAB16869.1| 362|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z82267-1|CAB05188.1| 109|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical p... 28 7.2
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 28 7.2
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 109 bits (262), Expect = 2e-24
Identities = 61/158 (38%), Positives = 86/158 (54%), Gaps = 4/158 (2%)
Frame = +2
Query: 2 ELCTPELQERLTPMRNKFKELEDAKVQSSLSSG--NKSHGDSSKAKKKRVLPYWFENDVG 175
+LC+ EL+++L R K EDAK++ L +K GD LP FE+D G
Sbjct: 327 DLCSQELKDKLVARRADIKLEEDAKLERELRKKVLDKEQGDKI-FDDGVALPTAFEDDAG 385
Query: 176 SNNSGYYRLQAVLTHRGRSSSSGHYVAWV--ARGAGWLRCXXXXXXXXXXXXXLKLSGGG 349
SNNSG+Y L+ ++TH+GRSS GHYVAW+ + W LK SGGG
Sbjct: 386 SNNSGFYDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVTVVDEEAILKTSGGG 445
Query: 350 DWHCAYLLLYGPKILELPEQDEDEPMVTDITDDPAGEP 463
DWH AY+LLY ++++ + P+ T++ D A EP
Sbjct: 446 DWHSAYVLLYEARVIKQFPELPPAPVPTEVAADTA-EP 482
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 109 bits (262), Expect = 2e-24
Identities = 61/158 (38%), Positives = 86/158 (54%), Gaps = 4/158 (2%)
Frame = +2
Query: 2 ELCTPELQERLTPMRNKFKELEDAKVQSSLSSG--NKSHGDSSKAKKKRVLPYWFENDVG 175
+LC+ EL+++L R K EDAK++ L +K GD LP FE+D G
Sbjct: 327 DLCSQELKDKLVARRADIKLEEDAKLERELRKKVLDKEQGDKI-FDDGVALPTAFEDDAG 385
Query: 176 SNNSGYYRLQAVLTHRGRSSSSGHYVAWV--ARGAGWLRCXXXXXXXXXXXXXLKLSGGG 349
SNNSG+Y L+ ++TH+GRSS GHYVAW+ + W LK SGGG
Sbjct: 386 SNNSGFYDLKGIITHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVTVVDEEAILKTSGGG 445
Query: 350 DWHCAYLLLYGPKILELPEQDEDEPMVTDITDDPAGEP 463
DWH AY+LLY ++++ + P+ T++ D A EP
Sbjct: 446 DWHSAYVLLYEARVIKQFPELPPAPVPTEVAADTA-EP 482
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 109 bits (262), Expect = 2e-24
Identities = 61/158 (38%), Positives = 86/158 (54%), Gaps = 4/158 (2%)
Frame = +2
Query: 2 ELCTPELQERLTPMRNKFKELEDAKVQSSLSSG--NKSHGDSSKAKKKRVLPYWFENDVG 175
+LC+ EL+++L R K EDAK++ L +K GD LP FE+D G
Sbjct: 327 DLCSQELKDKLVARRADIKLEEDAKLERELRKKVLDKEQGDKI-FDDGVALPTAFEDDAG 385
Query: 176 SNNSGYYRLQAVLTHRGRSSSSGHYVAWV--ARGAGWLRCXXXXXXXXXXXXXLKLSGGG 349
SNNSG+Y L+ ++TH+GRSS GHYVAW+ + W LK SGGG
Sbjct: 386 SNNSGFYDLKGIMTHKGRSSQDGHYVAWMRSSEDGKWRLFDDEHVTVVDEEAILKTSGGG 445
Query: 350 DWHCAYLLLYGPKILELPEQDEDEPMVTDITDDPAGEP 463
DWH AY+LLY ++++ + P+ T++ D A EP
Sbjct: 446 DWHSAYVLLYEARVIKQFPELPPAPVPTEVAADTA-EP 482
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +2
Query: 188 GYYRLQAVLTHRGRSSSSGHYVAW---VARGAGWLRC 289
G Y L AV+ H G S + GHYVA+ + + + WLRC
Sbjct: 757 GTYSLVAVVCHLGDSPNKGHYVAYTKELYKNSSWLRC 793
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +2
Query: 188 GYYRLQAVLTHRGRSSSSGHYVAW---VARGAGWLRC 289
G Y L AV+ H G S + GHYVA+ + + + WLRC
Sbjct: 757 GTYSLVAVVCHLGDSPNKGHYVAYTKELYKNSSWLRC 793
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWVARGA---GWLRC 289
Y L +V+ H G S + GH+VA+ + GWLRC
Sbjct: 488 YTLVSVVCHLGSSPNKGHHVAYTKKSLDNDGWLRC 522
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWVARGAGWLR 286
Y LQ+++ H G SGHY+A+ R W +
Sbjct: 637 YSLQSIIVHIGYGCGSGHYIAFGKRNGRWFQ 667
>AF003386-4|AAO38631.1| 452|Caenorhabditis elegans Hypothetical
protein F59E12.6b protein.
Length = 452
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 158 FENDVGSNNSGYYRLQAVLTHRGRSSSSGHYVAWV 262
F +N+S YY+L ++ H G S+ GH+ ++V
Sbjct: 267 FPTQPNANSSCYYKLTGLIVHVGSSAKEGHFYSFV 301
>AF003386-3|AAO38630.1| 499|Caenorhabditis elegans Hypothetical
protein F59E12.6a protein.
Length = 499
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 158 FENDVGSNNSGYYRLQAVLTHRGRSSSSGHYVAWV 262
F +N+S YY+L ++ H G S+ GH+ ++V
Sbjct: 314 FPTQPNANSSCYYKLTGLIVHVGSSAKEGHFYSFV 348
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Frame = +2
Query: 50 KFKELEDAKVQSSLSSGNKSHGDSSKAKKKRVLPYWFE--NDVGSNNSGYYRLQAVLTHR 223
KF E+E ++ S + +G K + E N + Y L A + H
Sbjct: 403 KFPEIEKNGLEQSEKQQDSQYGQLLDRMKSCEIIKCCETKNIIMEEKHDKYSLVAAICHL 462
Query: 224 GRSSSSGHYVAWVARGA--GWLRC 289
G + ++GHY+A+ WL C
Sbjct: 463 GETPTNGHYIAYTREDTENSWLYC 486
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWVARGAGWL 283
Y+L +++H G SGHYVA + + W+
Sbjct: 733 YKLIGMISHMGSRPDSGHYVAHMLKEGKWV 762
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 347 GDWHCAYLLLYGPKIL-ELPEQDEDE 421
GDW CA+ + +GP+++ E P + DE
Sbjct: 293 GDWSCAHCIEHGPEVVKEEPAKQNDE 318
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +2
Query: 347 GDWHCAYLLLYGPKIL-ELPEQDEDE 421
GDW CA+ + +GP+++ E P + DE
Sbjct: 293 GDWSCAHCIEHGPEVVKEEPAKQNDE 318
>AC006656-2|AAF39880.1| 326|Caenorhabditis elegans Hypothetical
protein H12I13.2 protein.
Length = 326
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 191 YYRLQAVLTHRGRSSSSGHY 250
Y++L +V+ HRG + SGH+
Sbjct: 294 YFKLTSVMVHRGECAQSGHF 313
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 383 PKILELPEQDEDE-PMVTDITDDPAGEPPTALA 478
P + + PE+DED P+V T P PP+ A
Sbjct: 101 PNVKDSPEEDEDAVPVVNRTTTSPPTSPPSQTA 133
>Z99710-6|CAB16869.1| 362|Caenorhabditis elegans Hypothetical
protein F08A8.6 protein.
Length = 362
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 616 KSKQFFSECSKHKHKN*VIEVYRIQSLSPFF 524
K+KQF+ ECSKH++ +++ +P F
Sbjct: 237 KTKQFYEECSKHQYFRCFVQIPTFPLHAPNF 267
>Z82267-1|CAB05188.1| 109|Caenorhabditis elegans Hypothetical
protein F38C2.1 protein.
Length = 109
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Frame = +2
Query: 155 WFENDVGSNNSGYYRLQAVLTHRGRSSSSGH-----YVAWVARGAG 277
+ +++V + GYY VL H+G+ + G+ Y+A A G G
Sbjct: 23 FIDDEVWAEVEGYYHPSGVLVHKGKEAVYGNKDKSTYIAKFAEGTG 68
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical protein
C27H6.1 protein.
Length = 1657
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 442 CYVRDHGLVLILLGELQDFRSVQQ 371
CYVR HGL L L + +D + +Q+
Sbjct: 1123 CYVRLHGLTLYLYNDKKDAQPIQE 1146
>Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical
protein R10E11.3b protein.
Length = 414
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWVARGAGWL 283
Y L A + H G + + GHY+ V + WL
Sbjct: 313 YDLVATVVHCGATPNRGHYITLVKSNSFWL 342
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 194 YRLQAVLTHRGRSSSSGHYVAWVARGAGWL 283
Y L A + H G + + GHY+ V + WL
Sbjct: 325 YDLVATVVHCGATPNRGHYITLVKSNSFWL 354
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,720,731
Number of Sequences: 27780
Number of extensions: 247317
Number of successful extensions: 728
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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