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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0354
         (430 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46343-1|CAA86456.2|  356|Caenorhabditis elegans Hypothetical pr...   162   8e-41
U00051-13|AAA91358.1|  491|Caenorhabditis elegans Hypothetical p...    71   3e-13
Z73973-3|CAA98265.1|  468|Caenorhabditis elegans Hypothetical pr...    60   5e-10
Z73973-4|CAE54908.1|  367|Caenorhabditis elegans Hypothetical pr...    52   2e-07
U00051-14|AAM29692.1|  469|Caenorhabditis elegans Hypothetical p...    46   9e-06
AC026301-13|AAP13737.1|  766|Caenorhabditis elegans Hypothetical...    43   1e-04
Z81525-9|CAB04260.1|  242|Caenorhabditis elegans Hypothetical pr...    39   0.002
AL031264-1|CAA20326.1|  242|Caenorhabditis elegans Hypothetical ...    39   0.002
CU457741-2|CAM36343.1|  574|Caenorhabditis elegans Hypothetical ...    36   0.012
AF039052-10|AAF98634.1|  536|Caenorhabditis elegans Hypothetical...    33   0.087
AC006834-5|AAF40007.1|  451|Caenorhabditis elegans Hypothetical ...    33   0.087
Z83221-3|CAB05705.1|  498|Caenorhabditis elegans Hypothetical pr...    30   0.61 
U29515-1|AAC06328.1|  449|Caenorhabditis elegans fem-2 protein.        30   0.81 
U28412-8|AAC46598.1|  449|Caenorhabditis elegans Feminization of...    30   0.81 
AF016666-6|AAB66086.1|  292|Caenorhabditis elegans Hypothetical ...    30   0.81 
AF068720-6|AAC17784.1|  541|Caenorhabditis elegans Hypothetical ...    29   1.1  
U52003-1|AAG00054.1|  503|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U52003-2|AAY43981.1|  554|Caenorhabditis elegans Hypothetical pr...    29   1.9  
AF022980-4|AAG24191.1|  335|Caenorhabditis elegans Serpentine re...    29   1.9  
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr...    28   2.5  
U20862-2|AAK29864.1|  179|Caenorhabditis elegans Hypothetical pr...    27   5.7  
AY594354-1|AAT01444.1|  539|Caenorhabditis elegans cofactor-inde...    27   5.7  
AF248541-1|AAF63761.1|  179|Caenorhabditis elegans cysteine-rich...    27   5.7  
AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical ...    27   5.7  
AF039713-12|AAO12419.1|  521|Caenorhabditis elegans Hypothetical...    27   5.7  
AF039713-11|AAB96720.1|  539|Caenorhabditis elegans Hypothetical...    27   5.7  
Z71185-7|CAA94907.2|  520|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z73906-6|CAA98113.1|  824|Caenorhabditis elegans Hypothetical pr...    26   10.0 

>Z46343-1|CAA86456.2|  356|Caenorhabditis elegans Hypothetical
           protein T23F11.1 protein.
          Length = 356

 Score =  162 bits (394), Expect = 8e-41
 Identities = 68/116 (58%), Positives = 97/116 (83%)
 Frame = +1

Query: 82  MGQTLSEPVTEKQSATCQDSRFLVGSSCMQGWRVSMDDSHTHILSLPDDPGTAFFAVYDG 261
           MGQTLSEPVT+K+SA+C +  +LVGSSCMQGWRV M+D+HTH+LSLPDDP  AFFAVYDG
Sbjct: 1   MGQTLSEPVTKKESASCANENYLVGSSCMQGWRVDMEDAHTHLLSLPDDPKCAFFAVYDG 60

Query: 262 HGGSNIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLDRAMLEEDMLQEKVAG 429
           HGGS +++++G +LHK + A+ E+  GN++EA+++GFL+LD+ M  ++  ++ V+G
Sbjct: 61  HGGSKVSQYSGINLHKKVVAQKEFSEGNMKEAIEKGFLELDQQMRVDEETKDDVSG 116


>U00051-13|AAA91358.1|  491|Caenorhabditis elegans Hypothetical
           protein F42G9.1a protein.
          Length = 491

 Score = 71.3 bits (167), Expect = 3e-13
 Identities = 33/112 (29%), Positives = 60/112 (53%)
 Frame = +1

Query: 82  MGQTLSEPVTEKQSATCQDSRFLVGSSCMQGWRVSMDDSHTHILSLPDDPGTAFFAVYDG 261
           MG  L++P+ EK+      +      + MQGWRV+ +D+H  ++ L  D     F VYDG
Sbjct: 1   MGAYLNKPIIEKEKEEGSGNGLSYACTTMQGWRVNQEDAHNCVVDLHTD--WHMFGVYDG 58

Query: 262 HGGSNIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLDRAMLEEDMLQE 417
           HGG+ +++     L  ++  R  +   ++ E L++ F+D D  +  E+ ++E
Sbjct: 59  HGGTEVSKFTSAKLPDFLKERKFWEADDVAECLQKAFVDFDDFIRAEESMKE 110


>Z73973-3|CAA98265.1|  468|Caenorhabditis elegans Hypothetical
           protein F25D1.1a protein.
          Length = 468

 Score = 60.5 bits (140), Expect = 5e-10
 Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
 Frame = +1

Query: 82  MGQTLSEPVTEKQSATCQDSRFLVGSSCMQGWRVSMDDSH-THILSLPDDP--GTAFFAV 252
           MG  L +P T+K +   + +    G S MQGWR+ M+DSH    +     P    +FFAV
Sbjct: 84  MGAFLDKPKTDKTNVHGEGNGIRYGMSSMQGWRICMEDSHIAEAIMSQSSPYKDWSFFAV 143

Query: 253 YDGHGGSNIAEHAGKHLHKYITARPEY 333
           +DGH G +IA  A   L +++ +  E+
Sbjct: 144 FDGHAGHHIANRASSQLLEHLISSEEF 170


>Z73973-4|CAE54908.1|  367|Caenorhabditis elegans Hypothetical
           protein F25D1.1b protein.
          Length = 367

 Score = 52.0 bits (119), Expect = 2e-07
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
 Frame = +1

Query: 148 LVGSSCMQGWRVSMDDSH-THILSLPDDP--GTAFFAVYDGHGGSNIAEHAGKHLHKYIT 318
           + G S MQGWR+ M+DSH    +     P    +FFAV+DGH G +IA  A   L +++ 
Sbjct: 5   IYGMSSMQGWRICMEDSHIAEAIMSQSSPYKDWSFFAVFDGHAGHHIANRASSQLLEHLI 64

Query: 319 ARPEY 333
           +  E+
Sbjct: 65  SSEEF 69


>U00051-14|AAM29692.1|  469|Caenorhabditis elegans Hypothetical
           protein F42G9.1b protein.
          Length = 469

 Score = 46.4 bits (105), Expect = 9e-06
 Identities = 21/78 (26%), Positives = 41/78 (52%)
 Frame = +1

Query: 184 SMDDSHTHILSLPDDPGTAFFAVYDGHGGSNIAEHAGKHLHKYITARPEYHLGNIEEALK 363
           +  D+H  ++ L  D     F VYDGHGG+ +++     L  ++  R  +   ++ E L+
Sbjct: 13  NFQDAHNCVVDLHTD--WHMFGVYDGHGGTEVSKFTSAKLPDFLKERKFWEADDVAECLQ 70

Query: 364 QGFLDLDRAMLEEDMLQE 417
           + F+D D  +  E+ ++E
Sbjct: 71  KAFVDFDDFIRAEESMKE 88


>AC026301-13|AAP13737.1|  766|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.1 protein.
          Length = 766

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
 Frame = +1

Query: 82  MGQTLSEPVTEKQSATCQDSRFLVGSSCMQGWRVSMDDS---HTHILSLPDDPGTAFFAV 252
           M QT SEP+        ++ R  V +S  QG R  M+D    HT  ++      T F  V
Sbjct: 1   MVQT-SEPMARTPIQFGENMRITVAAS--QGGRRYMEDRCVIHTERINNGLLDWT-FVGV 56

Query: 253 YDGHGGSNIAEHAGKHLHKYITARPEYHLGNIE---EALKQGFL 375
           +DGHGG + +E+  +HL   IT   ++   + E   EA++QGFL
Sbjct: 57  FDGHGGEHASEYVRRHLLMNITKNQKFESNSDEDILEAIRQGFL 100


>Z81525-9|CAB04260.1|  242|Caenorhabditis elegans Hypothetical
           protein F33A8.6 protein.
          Length = 242

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
 Frame = +1

Query: 148 LVGSSCMQGWRVSMDDSHTHILSLPDDPGT--------AFFAVYDGHGGSNIAEHAGKHL 303
           L    C +G R  M D  THI+    D GT        +FFA++DGH G   AEH    +
Sbjct: 33  LAAYGCRKGERADMQD--THIMLPKFDLGTEKSFLSRASFFAIFDGHAGPRAAEHCQSQM 90

Query: 304 HKYITAR--PEYHLGNIEEALKQGFLDLDRAM 393
            K +  +         + ++LKQ F +  +A+
Sbjct: 91  GKTVKEKLAKFSDFPTLTKSLKQTFTESYKAV 122


>AL031264-1|CAA20326.1|  242|Caenorhabditis elegans Hypothetical
           protein F33A8.6 protein.
          Length = 242

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
 Frame = +1

Query: 148 LVGSSCMQGWRVSMDDSHTHILSLPDDPGT--------AFFAVYDGHGGSNIAEHAGKHL 303
           L    C +G R  M D  THI+    D GT        +FFA++DGH G   AEH    +
Sbjct: 33  LAAYGCRKGERADMQD--THIMLPKFDLGTEKSFLSRASFFAIFDGHAGPRAAEHCQSQM 90

Query: 304 HKYITAR--PEYHLGNIEEALKQGFLDLDRAM 393
            K +  +         + ++LKQ F +  +A+
Sbjct: 91  GKTVKEKLAKFSDFPTLTKSLKQTFTESYKAV 122


>CU457741-2|CAM36343.1|  574|Caenorhabditis elegans Hypothetical
           protein C42C1.2 protein.
          Length = 574

 Score = 35.9 bits (79), Expect = 0.012
 Identities = 17/45 (37%), Positives = 27/45 (60%)
 Frame = +1

Query: 190 DDSHTHILSLPDDPGTAFFAVYDGHGGSNIAEHAGKHLHKYITAR 324
           DD+    +  P   G A F+++DGH GS +A  A K LH+++ +R
Sbjct: 158 DDTEKSSMFAPRADG-ALFSLFDGHAGSAVAVVASKCLHEHVKSR 201


>AF039052-10|AAF98634.1|  536|Caenorhabditis elegans Hypothetical
           protein T22D1.1 protein.
          Length = 536

 Score = 33.1 bits (72), Expect = 0.087
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 274 NIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 384
           ++A   G HLH YIT+  E +   + E  +QG+L LD
Sbjct: 185 HVANRFGGHLHMYITSMIESYFELMREYERQGYLTLD 221


>AC006834-5|AAF40007.1|  451|Caenorhabditis elegans Hypothetical
           protein ZK973.3 protein.
          Length = 451

 Score = 33.1 bits (72), Expect = 0.087
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = +1

Query: 115 KQSATCQDSRFLVGSSCMQGWRVSMDDSHTHILSLPDDPGTAFFAVYDGHGGSNIAEHAG 294
           ++SA  +D   +   +C       ++D ++    L        F V+DGHGG   + H  
Sbjct: 29  ERSANVEDDAIMRVDTCQLAANNPIEDFYSAAKCLSSR--AFLFGVFDGHGGQQCSRHIS 86

Query: 295 KHLHKYITA 321
            +L+ Y+ A
Sbjct: 87  TNLYPYLCA 95


>Z83221-3|CAB05705.1|  498|Caenorhabditis elegans Hypothetical
           protein C49A1.5 protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 0.61
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +1

Query: 274 NIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 384
           ++A   G HLH Y+T+  E +   ++E  +QG++ LD
Sbjct: 172 HVANRFGGHLHIYLTSIIESYFKLMKEYERQGYITLD 208


>U29515-1|AAC06328.1|  449|Caenorhabditis elegans fem-2 protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 0.81
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +1

Query: 223 DDPGTAFFAVYDGHGGSNIAEHAGKHL-HKYITARPEYH-LGNIEEALKQGFLDLDRAM 393
           +DP  +  AV+DGHGG   +++A  HL   ++  R       ++E+ L++    LD  M
Sbjct: 192 EDP-ISVLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDPSDSLEDQLRKSLELLDERM 249


>U28412-8|AAC46598.1|  449|Caenorhabditis elegans Feminization of xx
           and xo animalsprotein 2 protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 0.81
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +1

Query: 223 DDPGTAFFAVYDGHGGSNIAEHAGKHL-HKYITARPEYH-LGNIEEALKQGFLDLDRAM 393
           +DP  +  AV+DGHGG   +++A  HL   ++  R       ++E+ L++    LD  M
Sbjct: 192 EDP-ISVLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDPSDSLEDQLRKSLELLDERM 249


>AF016666-6|AAB66086.1|  292|Caenorhabditis elegans Hypothetical
           protein B0281.8 protein.
          Length = 292

 Score = 29.9 bits (64), Expect = 0.81
 Identities = 17/46 (36%), Positives = 21/46 (45%)
 Frame = -1

Query: 202 CVSHPWTLASLACMMIRPRTLNLDMLLTASLSQAQKGFAP*LFIFK 65
           CV HP+ +A  AC+     + N  M  T     A KG A  L I K
Sbjct: 95  CVEHPYNVAEFACIESNCSSKNKLMCQTCEEFGAHKGHAKELLITK 140


>AF068720-6|AAC17784.1|  541|Caenorhabditis elegans Hypothetical
           protein K02H11.4 protein.
          Length = 541

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 271 SNIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 384
           ++I+ + G HLH Y+T+  E +   + E  K G++ LD
Sbjct: 223 AHISHNFGGHLHLYVTSMLESYFDLVLEYEKLGYVTLD 260


>U52003-1|AAG00054.1|  503|Caenorhabditis elegans Hypothetical
           protein ZK381.2 protein.
          Length = 503

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 280 AEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 384
           A   G HLH Y+T+  E +   ++E  +QG++ LD
Sbjct: 181 ANRFGGHLHIYLTSIIESYFQLMQEYERQGYITLD 215


>U52003-2|AAY43981.1|  554|Caenorhabditis elegans Hypothetical
           protein ZK381.8 protein.
          Length = 554

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 274 NIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 384
           ++A   G HLH Y+T+  +     ++E  +QG++ LD
Sbjct: 231 HVANRFGGHLHIYLTSIIDSFFNLMKEYERQGYITLD 267


>AF022980-4|AAG24191.1|  335|Caenorhabditis elegans Serpentine
           receptor, class j protein50 protein.
          Length = 335

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 185 PWMTHTHIYCHYLMIRALHFLQST 256
           P   HT+ YC YLMI+   F++ST
Sbjct: 62  PMDIHTYRYCFYLMIKDGWFVEST 85


>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
            F25C8.3b protein.
          Length = 3175

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = +1

Query: 187  MDDSHTHILSLPDDPGTAFFAVYDGHGGSNIAEHAGKHLHKYITARPEYHLGNIEEALKQ 366
            + D  TH+ S P       F +Y G GG  +   A + +HK++ A+    + ++ E ++ 
Sbjct: 2175 LHDEFTHLPSFPRKSLETCFGMYFGPGGEQL--KAMESMHKFVWAK---MMSDMFEKMEN 2229

Query: 367  GFLDLD 384
             F+  D
Sbjct: 2230 AFMFAD 2235


>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
            F25C8.3a protein.
          Length = 3184

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = +1

Query: 187  MDDSHTHILSLPDDPGTAFFAVYDGHGGSNIAEHAGKHLHKYITARPEYHLGNIEEALKQ 366
            + D  TH+ S P       F +Y G GG  +   A + +HK++ A+    + ++ E ++ 
Sbjct: 2184 LHDEFTHLPSFPRKSLETCFGMYFGPGGEQL--KAMESMHKFVWAK---MMSDMFEKMEN 2238

Query: 367  GFLDLD 384
             F+  D
Sbjct: 2239 AFMFAD 2244


>U20862-2|AAK29864.1|  179|Caenorhabditis elegans Hypothetical
           protein W06E11.5a protein.
          Length = 179

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 304 VNVSQHVLLCLNLHDHRRLQKMQCPDHQVVTVYVCVSHPWTLA 176
           +  S   +LCLN      L+K  C DH+ V++Y  +   W+LA
Sbjct: 110 IGCSMWPVLCLNRRTVLALEK--CLDHENVSLYHKLGLHWSLA 150


>AY594354-1|AAT01444.1|  539|Caenorhabditis elegans
           cofactor-independent phosphoglyceratemutase protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 15/61 (24%), Positives = 24/61 (39%)
 Frame = -1

Query: 331 TRVVLLYTYVNVSQHVLLCLNLHDHRRLQKMQCPDHQVVTVYVCVSHPWTLASLACMMIR 152
           T + +   Y    +H    +   DH   +KM+ PD    T + C   P TL+      + 
Sbjct: 444 TDIAIGRIYEATQKHGYSLMVTADHGNAEKMKAPDGGKHTAHTCYRVPLTLSHPGFKFVD 503

Query: 151 P 149
           P
Sbjct: 504 P 504


>AF248541-1|AAF63761.1|  179|Caenorhabditis elegans cysteine-rich
           hydrophobic protein protein.
          Length = 179

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -1

Query: 304 VNVSQHVLLCLNLHDHRRLQKMQCPDHQVVTVYVCVSHPWTLA 176
           +  S   +LCLN      L+K  C DH+ V++Y  +   W+LA
Sbjct: 110 IGCSMWPVLCLNRRTVLALEK--CLDHENVSLYHKLGLHWSLA 150


>AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical
           protein K08D9.6 protein.
          Length = 530

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 274 NIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 384
           ++A   G HLH Y+T+  E     + E  K+ +L LD
Sbjct: 209 HVAHRFGGHLHIYLTSIVESFFNLMREYEKRKYLTLD 245


>AF039713-12|AAO12419.1|  521|Caenorhabditis elegans Hypothetical
           protein F57B10.3b protein.
          Length = 521

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 15/61 (24%), Positives = 24/61 (39%)
 Frame = -1

Query: 331 TRVVLLYTYVNVSQHVLLCLNLHDHRRLQKMQCPDHQVVTVYVCVSHPWTLASLACMMIR 152
           T + +   Y    +H    +   DH   +KM+ PD    T + C   P TL+      + 
Sbjct: 426 TDIAIGRIYEATQKHGYSLMVTADHGNAEKMKAPDGGKHTAHTCYRVPLTLSHPGFKFVD 485

Query: 151 P 149
           P
Sbjct: 486 P 486


>AF039713-11|AAB96720.1|  539|Caenorhabditis elegans Hypothetical
           protein F57B10.3a protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 15/61 (24%), Positives = 24/61 (39%)
 Frame = -1

Query: 331 TRVVLLYTYVNVSQHVLLCLNLHDHRRLQKMQCPDHQVVTVYVCVSHPWTLASLACMMIR 152
           T + +   Y    +H    +   DH   +KM+ PD    T + C   P TL+      + 
Sbjct: 444 TDIAIGRIYEATQKHGYSLMVTADHGNAEKMKAPDGGKHTAHTCYRVPLTLSHPGFKFVD 503

Query: 151 P 149
           P
Sbjct: 504 P 504


>Z71185-7|CAA94907.2|  520|Caenorhabditis elegans Hypothetical
           protein C35A5.5 protein.
          Length = 520

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +1

Query: 271 SNIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 384
           +++A   G HLH Y+T+  +     ++E  + G++ +D
Sbjct: 201 AHVARKFGGHLHMYVTSIIDTFFDLVQEYERLGYVTID 238


>Z73906-6|CAA98113.1|  824|Caenorhabditis elegans Hypothetical
           protein D2030.6 protein.
          Length = 824

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 14/57 (24%), Positives = 26/57 (45%)
 Frame = +1

Query: 199 HTHILSLPDDPGTAFFAVYDGHGGSNIAEHAGKHLHKYITARPEYHLGNIEEALKQG 369
           H  + S  ++P      + + +GG+ I       LH+Y   R +Y +  + E +K G
Sbjct: 225 HKELRSCQNNPQRVQEKMNEMYGGTTIITRYNNKLHRY--TRLDYSISPLSEFVKDG 279


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,678,313
Number of Sequences: 27780
Number of extensions: 201600
Number of successful extensions: 531
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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