Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0353
(592 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4156| Best HMM Match : Ets (HMM E-Value=0) 95 3e-20
SB_40652| Best HMM Match : Ets (HMM E-Value=0) 78 5e-15
SB_46246| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 9e-12
SB_28841| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_34495| Best HMM Match : Ets (HMM E-Value=0) 65 5e-11
SB_7150| Best HMM Match : Ets (HMM E-Value=2e-38) 57 9e-09
SB_13976| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 50 1e-06
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_19675| Best HMM Match : Ets (HMM E-Value=1.2e-25) 46 2e-05
SB_31522| Best HMM Match : Ets (HMM E-Value=3.3e-25) 38 0.005
SB_28407| Best HMM Match : SAM_PNT (HMM E-Value=3.4e-13) 34 0.076
SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_8499| Best HMM Match : DUF229 (HMM E-Value=0) 29 2.1
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 29 2.1
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 28 5.0
SB_14689| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_1652| Best HMM Match : Keratin_B2 (HMM E-Value=0.031) 28 5.0
SB_38839| Best HMM Match : HicB (HMM E-Value=5.7) 27 8.7
SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 27 8.7
>SB_4156| Best HMM Match : Ets (HMM E-Value=0)
Length = 516
Score = 95.5 bits (227), Expect = 3e-20
Identities = 47/66 (71%), Positives = 51/66 (77%), Gaps = 2/66 (3%)
Frame = +2
Query: 401 GGGQVQLWQFLLEELA--AGAPGICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDK 574
G GQ+QLWQFLLE L+ A I WEG +GEF+L DPDEVARRWG RK KPNMNYDK
Sbjct: 353 GSGQIQLWQFLLELLSDPKNANCIAWEGT--NGEFKLVDPDEVARRWGERKNKPNMNYDK 410
Query: 575 LSRALR 592
LSRALR
Sbjct: 411 LSRALR 416
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +3
Query: 54 DNEDETVPADPEKWDRSDVMRCVRWVARTFRVAAPRRHLLPDTGKDLLALTAQQWTEV 227
DN VPADP W + V + + W + F + G+DL LT + ++
Sbjct: 155 DNRRVIVPADPLCWTKEHVRQWILWAIKEFSLKDIDIDRFNIDGRDLCRLTRDDFMKL 212
>SB_40652| Best HMM Match : Ets (HMM E-Value=0)
Length = 120
Score = 78.2 bits (184), Expect = 5e-15
Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 2/64 (3%)
Frame = +2
Query: 407 GQVQLWQFLLEELAAGAPG--ICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKLS 580
GQ+QLWQFLLE L I W G +GEF+L+DP++VA++WG+RK KP MNY+KLS
Sbjct: 4 GQIQLWQFLLELLTDKTCRHLIMWVGE--EGEFKLNDPEQVAQQWGKRKNKPAMNYEKLS 61
Query: 581 RALR 592
RALR
Sbjct: 62 RALR 65
>SB_46246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 67.3 bits (157), Expect = 9e-12
Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = +2
Query: 413 VQLWQFLLEELAAGAPG--ICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKLSRA 586
+ LW+FLL+ LA G I W GEF+L + +EVARRWG K +P MNYDKLSRA
Sbjct: 13 IHLWEFLLDLLADGRYSSIISWTNRES-GEFKLLNQEEVARRWGHLKHRPGMNYDKLSRA 71
Query: 587 LR 592
LR
Sbjct: 72 LR 73
>SB_28841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/64 (54%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +2
Query: 407 GQVQLWQFLLEELAAG--APGICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKLS 580
G +QLWQFL+ L + I W G EF+L DP+EVARRWG +K +P MNYDKLS
Sbjct: 243 GSLQLWQFLVALLDEPECSSFIAWTGR--GLEFKLIDPEEVARRWGLQKNRPAMNYDKLS 300
Query: 581 RALR 592
R+LR
Sbjct: 301 RSLR 304
>SB_34495| Best HMM Match : Ets (HMM E-Value=0)
Length = 476
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +2
Query: 401 GGGQVQLWQFLLEELAAGAPGICWEGPPGDG-EFRLSDPDEVARRWGRRKQKPNMNYDKL 577
G G +QLWQFLLE L E + EF+L +P +A WG+RK KPNMNY+KL
Sbjct: 232 GNGPIQLWQFLLELLLCPQSQRLIEWTYDEKFEFKLLNPPVIATMWGKRKNKPNMNYEKL 291
Query: 578 SRALR 592
SR LR
Sbjct: 292 SRGLR 296
>SB_7150| Best HMM Match : Ets (HMM E-Value=2e-38)
Length = 188
Score = 57.2 bits (132), Expect = 9e-09
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +2
Query: 413 VQLWQFLLEELAAGAPG--ICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKLSRA 586
+ LW+FLLE LA I W GEF+L + +EVA+RWG K + MNY+KLSRA
Sbjct: 29 IHLWEFLLELLADERYSSLIAWSRKEY-GEFKLKNQEEVAKRWGILKHRAGMNYEKLSRA 87
Query: 587 LR 592
+R
Sbjct: 88 IR 89
>SB_13976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 763
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Frame = +2
Query: 413 VQLWQFL---LEELAAGAPGICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKLSR 583
+ LW+FL L+ A I W DG FRL D VAR WG+RK + +M Y+K+SR
Sbjct: 532 IHLWEFLEELLDNKAYSPKFITWVSRD-DGMFRLVDSKAVARLWGQRKNRHDMTYEKMSR 590
Query: 584 ALR 592
A+R
Sbjct: 591 AIR 593
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +2
Query: 413 VQLWQFLLE--ELAAGAPG-ICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKLSR 583
+ LW+FL E E P I W +G FRL + VA+ WG+RK + NMNY+K+SR
Sbjct: 535 LHLWEFLKELLENEETCPRYITWISRE-EGVFRLVNSGAVAKLWGQRKNRRNMNYEKMSR 593
Query: 584 ALR 592
ALR
Sbjct: 594 ALR 596
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +2
Query: 413 VQLWQFLLE--ELAAGAPG-ICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKLSR 583
+ LW+FL E E P I W +G FRL + VA+ WG+RK + NMNY+K+SR
Sbjct: 881 LHLWEFLKELLENEETCPRYITWISRE-EGVFRLVNSGAVAKLWGQRKNRRNMNYEKMSR 939
Query: 584 ALR 592
ALR
Sbjct: 940 ALR 942
>SB_19675| Best HMM Match : Ets (HMM E-Value=1.2e-25)
Length = 139
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Frame = +2
Query: 416 QLWQFLLEELAA--GAPGICW-EGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKLSRA 586
+L QFLL+ L++ + I W G PG EF+L P+ VAR+WG + K M Y +SRA
Sbjct: 38 RLCQFLLDLLSSPENSQIISWTNGQPG--EFKLLGPEAVARKWGDQTGKQKMTYKIMSRA 95
Query: 587 LR 592
LR
Sbjct: 96 LR 97
>SB_31522| Best HMM Match : Ets (HMM E-Value=3.3e-25)
Length = 79
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 491 GEFRLSDPDEVARRWGRRKQKPNMNYDKLSRALR 592
G F+ + +VAR WG R+ KP M Y+ +R+LR
Sbjct: 24 GIFKFINSTKVAREWGERRNKPFMKYENFARSLR 57
>SB_28407| Best HMM Match : SAM_PNT (HMM E-Value=3.4e-13)
Length = 233
Score = 34.3 bits (75), Expect = 0.076
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 57 NEDETVPADPEKWDRSDVMRCVRWVARTFRVAAPRRHLLPDTGKDLLALT 206
NED DP W R DV +RW++ + + + GK L +T
Sbjct: 155 NEDTVPSVDPRLWTREDVTSWLRWISEAYSLENVKLDRFEMNGKALCLMT 204
>SB_33428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 60 EDETVPADPEKWDRSDVMRCVRWVARTFRV 149
E VP DP W + DV+ ++W + V
Sbjct: 114 EQPRVPPDPRLWSKWDVLEWLKWATERYNV 143
>SB_8499| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 926
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +2
Query: 389 SARAGG--GQVQLWQFL--LEELAAGAPGICWEGPPGDGEFRLSDPDEVARRWGRRKQ 550
S AG G LW+FL L I W+ P G FR+ D + VA+ WG+ K+
Sbjct: 40 SCNAGSIDGCQYLWEFLHYLVTDKKYEKYIAWQNPQ-KGIFRMVDHNGVAKLWGKHKK 96
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 128 GGSHLQGGGAAETPAAGHRQGPSSAHRAAVDGGVFRG 238
G +QGGG P G +GP +GG+ RG
Sbjct: 63 GWGRMQGGGMGRGPGGGLGRGPGGGWGRMQEGGMGRG 99
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 128 GGSHLQGGGAAETPAAGHRQGPSSAHRAAVDGGVFRG 238
G +QGGG P G +GP GG+ RG
Sbjct: 322 GWGRMQGGGMGRGPGGGLGRGPGGGWGRMQGGGMGRG 358
>SB_14689| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1900
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 202 SPRSSGRRCVPGMSKQVGYTTHTSDTLTPAPLVYRPR 312
SP+S+ R CVP TH SDT+ P P+ P+
Sbjct: 620 SPKSTPRNCVP---------THDSDTINPFPVNITPK 647
>SB_1652| Best HMM Match : Keratin_B2 (HMM E-Value=0.031)
Length = 563
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -1
Query: 214 CCAVSARRSLPVSGSRCLRGAATLKVRATHLT 119
CCAVS R SL + S+ R A T+ V T +T
Sbjct: 503 CCAVSCRASLVIKASQYYR-ARTVPVTDTRIT 533
>SB_38839| Best HMM Match : HicB (HMM E-Value=5.7)
Length = 268
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 242 ASRSDIRRIHPTRSRQRHWSTAPAA 316
ASRS R TR R RHW P A
Sbjct: 40 ASRSHAMRSMRTRRRARHWDRLPIA 64
>SB_3165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +2
Query: 74 ASRS*EMGQKRRDAVREMGGSHLQGGGAAETPAAGHRQGPSSAHRAAVDGG 226
AS + E G+ + G + GGA+E A G S A A+ GG
Sbjct: 509 ASETIEAGEASKAGEASKAGGVSEAGGASEAGEASEAGGASEAGEASEAGG 559
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 65 RDRASRS*EMGQKRRDAVREMGGSHLQGGGAAETPAAGHRQGPSSAHRAAVDGG 226
RDR+ R + G RRDA +E LQ P ++ P+ + +A+ GG
Sbjct: 544 RDRSDRYDDHGADRRDAPKERPRLQLQ---PRTKPPEETKEAPAESRSSAIFGG 594
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,323,285
Number of Sequences: 59808
Number of extensions: 397916
Number of successful extensions: 1384
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1378
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -