Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0353
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56966-1|AAA98717.1| 208|Caenorhabditis elegans Ets class trans... 97 6e-21
U39470-3|AAC71120.1| 377|Caenorhabditis elegans Hypothetical pr... 91 4e-19
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 75 4e-14
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 75 4e-14
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 75 4e-14
Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical pr... 51 5e-07
U41547-4|AAA83194.3| 376|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF024491-4|AAZ82855.1| 365|Caenorhabditis elegans Hypothetical ... 47 1e-05
AF024491-3|AAB70311.2| 420|Caenorhabditis elegans Hypothetical ... 47 1e-05
U97005-6|AAB52279.1| 242|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U97005-4|AAB52283.1| 314|Caenorhabditis elegans Hypothetical pr... 41 6e-04
AF036689-2|AAB88319.1| 180|Caenorhabditis elegans Hypothetical ... 37 0.012
U64598-9|AAK39212.2| 174|Caenorhabditis elegans Hypothetical pr... 34 0.066
U64598-8|AAQ82848.1| 396|Caenorhabditis elegans Hypothetical pr... 34 0.066
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 30 1.4
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 30 1.4
Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical pr... 28 4.3
L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleo... 28 4.3
AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc fi... 28 4.3
Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81477-1|CAB03931.1| 271|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81069-2|CAB02992.1| 310|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF106578-1|AAC78197.1| 252|Caenorhabditis elegans Hypothetical ... 28 5.7
Z30317-6|CAA82972.3| 193|Caenorhabditis elegans Hypothetical pr... 27 10.0
>U56966-1|AAA98717.1| 208|Caenorhabditis elegans Ets class
transcription factorprotein 5 protein.
Length = 208
Score = 97.5 bits (232), Expect = 6e-21
Identities = 51/72 (70%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Frame = +2
Query: 383 ALSARAGGGQVQLWQFLLEELA--AGAPGICWEGPPGDGEFRLSDPDEVARRWGRRKQKP 556
ALSA G GQ+QLWQFLLE LA A I WEG +GEF+L DPDEVAR+WG RK KP
Sbjct: 26 ALSA-TGTGQIQLWQFLLELLADAVNAHCIAWEG--SNGEFKLVDPDEVARKWGERKSKP 82
Query: 557 NMNYDKLSRALR 592
NMNYDKLSRALR
Sbjct: 83 NMNYDKLSRALR 94
>U39470-3|AAC71120.1| 377|Caenorhabditis elegans Hypothetical
protein T08H4.3 protein.
Length = 377
Score = 91.5 bits (217), Expect = 4e-19
Identities = 45/69 (65%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = +2
Query: 392 ARAGGGQVQLWQFLLEELAAG--APGICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMN 565
A +G GQ QLWQFLLE L+ + I WEG GEF+L DPDEVAR+WG RK KPNMN
Sbjct: 207 AHSGSGQTQLWQFLLELLSDKRYSEVITWEGT--QGEFKLVDPDEVARKWGERKSKPNMN 264
Query: 566 YDKLSRALR 592
YDK+SRALR
Sbjct: 265 YDKMSRALR 273
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/61 (62%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = +2
Query: 413 VQLWQFLLEELAAGAPGICWEGPPG-DGEFRLSDPDEVARRWGRRKQKPNMNYDKLSRAL 589
+ LWQFLLE L G E G DGEFRL D + VAR+WG+RK KP+MNYDKLSRAL
Sbjct: 64 ITLWQFLLELLQQDQNGDIIEWTRGTDGEFRLIDAEAVARKWGQRKAKPHMNYDKLSRAL 123
Query: 590 R 592
R
Sbjct: 124 R 124
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/61 (62%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = +2
Query: 413 VQLWQFLLEELAAGAPGICWEGPPG-DGEFRLSDPDEVARRWGRRKQKPNMNYDKLSRAL 589
+ LWQFLLE L G E G DGEFRL D + VAR+WG+RK KP+MNYDKLSRAL
Sbjct: 64 ITLWQFLLELLQQDQNGDIIEWTRGTDGEFRLIDAEAVARKWGQRKAKPHMNYDKLSRAL 123
Query: 590 R 592
R
Sbjct: 124 R 124
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 74.9 bits (176), Expect = 4e-14
Identities = 38/61 (62%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = +2
Query: 413 VQLWQFLLEELAAGAPGICWEGPPG-DGEFRLSDPDEVARRWGRRKQKPNMNYDKLSRAL 589
+ LWQFLLE L G E G DGEFRL D + VAR+WG+RK KP+MNYDKLSRAL
Sbjct: 64 ITLWQFLLELLQQDQNGDIIEWTRGTDGEFRLIDAEAVARKWGQRKAKPHMNYDKLSRAL 123
Query: 590 R 592
R
Sbjct: 124 R 124
>Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = +2
Query: 416 QLWQFLLEELA--AGAPGIC-WEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKLSRA 586
+LW+F+ + L + P + WE P +G FR+ + +++AR WG RK M Y+KLSRA
Sbjct: 395 KLWEFIRDALKDPSTCPSVVRWEDPI-EGVFRIVESEKLARLWGARKNNEKMTYEKLSRA 453
Query: 587 LR 592
+R
Sbjct: 454 MR 455
>Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 51.2 bits (117), Expect = 5e-07
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Frame = +2
Query: 416 QLWQFLLEELA--AGAPGIC-WEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKLSRA 586
+LW+F+ + L + P + WE P +G FR+ + +++AR WG RK M Y+KLSRA
Sbjct: 395 KLWEFIRDALKDPSTCPSVVRWEDPI-EGVFRIVESEKLARLWGARKNNEKMTYEKLSRA 453
Query: 587 LR 592
+R
Sbjct: 454 MR 455
>U41547-4|AAA83194.3| 376|Caenorhabditis elegans Hypothetical
protein F22A3.1 protein.
Length = 376
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Frame = +2
Query: 407 GQVQLWQF---LLEELAAGAPGICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKL 577
G V LWQF LL++ + + W +G F++ +AR WG+RK + MNYDKL
Sbjct: 286 GTVHLWQFIRELLDQPKQYSACVRWVDRD-EGTFKIESSLLLARYWGQRKNRSQMNYDKL 344
Query: 578 SRALR 592
SR+LR
Sbjct: 345 SRSLR 349
>AF024491-4|AAZ82855.1| 365|Caenorhabditis elegans Hypothetical
protein C24A1.2b protein.
Length = 365
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 407 GQVQ-LWQFLLEELAAG--APGICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKL 577
GQV LW+FLL L +P G F+L D V+R WG K KP MNY+ +
Sbjct: 236 GQVTYLWEFLLRLLQDDQYSPKFIKWIDQAKGIFKLVDSKAVSRLWGMHKNKPGMNYETM 295
Query: 578 SRALR 592
RALR
Sbjct: 296 GRALR 300
>AF024491-3|AAB70311.2| 420|Caenorhabditis elegans Hypothetical
protein C24A1.2a protein.
Length = 420
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 407 GQVQ-LWQFLLEELAAG--APGICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKL 577
GQV LW+FLL L +P G F+L D V+R WG K KP MNY+ +
Sbjct: 291 GQVTYLWEFLLRLLQDDQYSPKFIKWIDQAKGIFKLVDSKAVSRLWGMHKNKPGMNYETM 350
Query: 578 SRALR 592
RALR
Sbjct: 351 GRALR 355
>U97005-6|AAB52279.1| 242|Caenorhabditis elegans Hypothetical
protein F19F10.1 protein.
Length = 242
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 407 GQVQLWQFL--LEELAAGAPGICWEGPPGDGEFRLSDPDEVARRWGRRKQKPNMNYDKLS 580
G+++L FL L E + + I W + F++S P +VA WG P MNYDK+S
Sbjct: 42 GKLRLLSFLRDLLEDESNSDIIYWFDK-SESVFKMSKPHKVAELWGAATGNPGMNYDKMS 100
Query: 581 RALR 592
R LR
Sbjct: 101 RGLR 104
>U97005-4|AAB52283.1| 314|Caenorhabditis elegans Hypothetical
protein F19F10.5 protein.
Length = 314
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2
Query: 494 EFRLSDPDEVARRWGRRKQKPNMNYDKLSRALR 592
EF++ P +VA WG P MNYDK+SR LR
Sbjct: 97 EFQMLKPHKVAELWGAATGNPGMNYDKMSRGLR 129
>AF036689-2|AAB88319.1| 180|Caenorhabditis elegans Hypothetical
protein C50A2.4 protein.
Length = 180
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 494 EFRLSDPDEVARRWGRRKQKPNMNYDKLSRALR 592
EF++ D EVAR WG K M+Y+ LSR++R
Sbjct: 97 EFQMVDRQEVARLWGAEKGNLKMDYEFLSRSIR 129
>U64598-9|AAK39212.2| 174|Caenorhabditis elegans Hypothetical
protein C52B9.2a protein.
Length = 174
Score = 34.3 bits (75), Expect = 0.066
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +2
Query: 485 GDG-EFRLSDPDEVARRWGRRKQKP-NMNYDKLSRALR 592
G+G EF L + + VA+ WG RK +M+Y KLSRA+R
Sbjct: 41 GNGLEFVLVNKELVAKMWGNRKHNTKDMDYYKLSRAIR 78
>U64598-8|AAQ82848.1| 396|Caenorhabditis elegans Hypothetical
protein C52B9.2b protein.
Length = 396
Score = 34.3 bits (75), Expect = 0.066
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +2
Query: 485 GDG-EFRLSDPDEVARRWGRRKQKP-NMNYDKLSRALR 592
G+G EF L + + VA+ WG RK +M+Y KLSRA+R
Sbjct: 108 GNGLEFVLVNKELVAKMWGNRKHNTKDMDYYKLSRAIR 145
Score = 34.3 bits (75), Expect = 0.066
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +2
Query: 485 GDG-EFRLSDPDEVARRWGRRKQKP-NMNYDKLSRALR 592
G+G EF + + V++ WG RK+ +MNY KLSRA+R
Sbjct: 300 GNGLEFVIVNTKLVSKLWGNRKRNTKDMNYSKLSRAMR 337
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 18 RHACMESTTPGSDNEDETVPADPEKWDRSDVMRCV--RWVARTFRVAAPRRHLLPDTGKD 191
R+ +E T + + + W S +M+ RW+ R R+ + +LP K+
Sbjct: 625 RNVLLEKITEANQEGSDMREQEKNIWTASQIMKAEMERWMDRELRLGPEKNAILPTDDKN 684
Query: 192 LLALTAQQWTEV 227
+ ++ ++ E+
Sbjct: 685 KIMISVRKQIEI 696
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 18 RHACMESTTPGSDNEDETVPADPEKWDRSDVMRCV--RWVARTFRVAAPRRHLLPDTGKD 191
R+ +E T + + + W S +M+ RW+ R R+ + +LP K+
Sbjct: 638 RNVLLEKITEANQEGSDMREQEKNIWTASQIMKAEMERWMDRELRLGPEKNAILPTDDKN 697
Query: 192 LLALTAQQWTEV 227
+ ++ ++ E+
Sbjct: 698 KIMISVRKQIEI 709
>Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical
protein F09F3.5 protein.
Length = 718
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -1
Query: 247 ACSSPEHTSVHCCAVSARRSLPVSGSRCLR 158
AC+SP+ S +C ++ R+ P + C+R
Sbjct: 261 ACNSPQRVSPNCAPITIPRNDPYFNTPCMR 290
>L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleoli
protein 1 protein.
Length = 851
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 129 PISRTASRRFCPISQDRLARSRPH 58
PI R SR PI Q++LARS PH
Sbjct: 455 PIGRAQSR-IIPIEQNQLARSPPH 477
>AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc
finger protein Ncl-1 protein.
Length = 851
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 129 PISRTASRRFCPISQDRLARSRPH 58
PI R SR PI Q++LARS PH
Sbjct: 455 PIGRAQSR-IIPIEQNQLARSPPH 477
>Z82265-6|CAB05170.2| 537|Caenorhabditis elegans Hypothetical
protein F02H6.1 protein.
Length = 537
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 98 QKRRDAVREMGGSHLQGGGAAETPAAGHRQGPSSAHRAAVDGGVFR 235
++RRD +RE+G + AAG+R+G + R + + FR
Sbjct: 249 EQRRDRLREIGQRIFNRFEQQQEEAAGNREGSEAGERPSKENIEFR 294
>Z81477-1|CAB03931.1| 271|Caenorhabditis elegans Hypothetical
protein C27C7.1 protein.
Length = 271
Score = 27.9 bits (59), Expect = 5.7
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 131 GSHLQGGGAAETPAAGHRQGPSSAHR--AAVDGGVFRG*ASRSDIRRIHPTRSRQRHWST 304
G+ LQ + + GH S +H +A GG R R +HP++ QRH S
Sbjct: 37 GTDLQRASSG-SDVHGHPSPGSQSHNLTSAQSGG--RNAHKDLHERHVHPSQGYQRHGSK 93
Query: 305 APA 313
APA
Sbjct: 94 APA 96
>Z81069-2|CAB02992.1| 310|Caenorhabditis elegans Hypothetical
protein F25H9.2 protein.
Length = 310
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = +3
Query: 54 DNEDETVPADPEKWDRSDVMRCVRWVARTFRVAAPRRHLLPDTGKDLLALTAQQWTEVCS 233
DN DET+ + + RC RW+++T + A ++ L + K +L + +
Sbjct: 212 DNVDETLEYATKLKSENARQRCERWISKTQLLTAKKKMKLAE--KYVLVELQNECVAMLK 269
Query: 234 GDEQAGRIYD 263
+Q R+++
Sbjct: 270 TSQQVQRLFE 279
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical protein
F44G4.8 protein.
Length = 1367
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = -2
Query: 414 TCPPPARALKAAYPSETQVVQTECXXXXXXXXXXXXXVDQWR-WRERVGCMRRISDLLAH 238
T PPP+ + P+ T T+C + R RER G R+ L +
Sbjct: 971 TTPPPSSTTSSNSPTSTSTTMTDCGSNPHLGAPNAGGHRRTRSLRERTGVEHRLERLSSG 1030
Query: 237 PRNTPP 220
P + P
Sbjct: 1031 PVHRTP 1036
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical protein
F44G4.8 protein.
Length = 1367
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = -2
Query: 414 TCPPPARALKAAYPSETQVVQTECXXXXXXXXXXXXXVDQWR-WRERVGCMRRISDLLAH 238
T PPP+ + P+ T T+C + R RER G R+ L +
Sbjct: 971 TTPPPSSTTSSNSPTSTSTTMTDCGSNPHLGAPNAGGHRRTRSLRERTGVEHRLERLSSG 1030
Query: 237 PRNTPP 220
P + P
Sbjct: 1031 PVHRTP 1036
>AF106578-1|AAC78197.1| 252|Caenorhabditis elegans Hypothetical
protein H11L12.1 protein.
Length = 252
Score = 27.9 bits (59), Expect = 5.7
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +2
Query: 98 QKRRDAVREMGGSHLQGGGAAETPAAGHRQGPSSAHRAAVDGGVFRG*ASRSDIRRIHPT 277
++R D+ R GS + G P++G + S +A GG R R +HP+
Sbjct: 36 ERRMDSQRASSGSDIHGH-----PSSGSQ---SRNLTSAQSGG--RNAHKDLHERHVHPS 85
Query: 278 RSRQRHWSTAPA 313
+ QRH S APA
Sbjct: 86 QGYQRHGSKAPA 97
>Z30317-6|CAA82972.3| 193|Caenorhabditis elegans Hypothetical
protein T16G12.3 protein.
Length = 193
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 260 RRIHPTRSRQRHWSTAPA 313
R +HP++ QRH S APA
Sbjct: 80 RHVHPSQGYQRHGSKAPA 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,428,728
Number of Sequences: 27780
Number of extensions: 272821
Number of successful extensions: 823
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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