Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0353
         (592 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g15460.1 68417.m02363 glycine-rich protein                          29   2.3  
At1g22340.1 68414.m02795 UDP-glucoronosyl/UDP-glucosyl transfera...    28   5.4  
At5g57770.1 68418.m07221 expressed protein                             27   7.1  
At3g14480.1 68416.m01834 glycine/proline-rich protein contains 1...    27   7.1  
At1g22400.1 68414.m02801 UDP-glucoronosyl/UDP-glucosyl transfera...    27   7.1  
At3g17860.2 68416.m02277 expressed protein                             27   9.4  
At3g17860.1 68416.m02276 expressed protein                             27   9.4  
At1g78270.1 68414.m09121 UDP-glucose glucosyltransferase, putati...    27   9.4  

>At4g15460.1 68417.m02363 glycine-rich protein 
          Length = 148

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
 Frame = +2

Query: 125 MGGSHLQGGGAAETPAAGHRQGPSSAHRAAVDG-GVFRG 238
           +GG H  GGG       GH  G    H     G G+ RG
Sbjct: 74  VGGGHASGGGGHAVEGGGHAGGGGGGHGEEEGGHGIGRG 112



 Score = 28.3 bits (60), Expect = 4.1
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 125 MGGSHLQGGGAAETPAAGHRQGPSSAHRAAVDGGVFRG 238
           +GG H  GGG   +   GH  G    H  AV+GG   G
Sbjct: 60  VGGGHASGGGGHASVGGGHASG-GGGH--AVEGGGHAG 94


>At1g22340.1 68414.m02795 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase; similar
           to UDP-glucose glucosyltransferase GI:3928543 from
           [Arabidopsis thaliana]
          Length = 487

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 422 WQFLLEELAAGAPGICW 472
           W   LE LA G P ICW
Sbjct: 384 WNSTLESLAGGVPMICW 400


>At5g57770.1 68418.m07221 expressed protein 
          Length = 409

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 14/78 (17%)
 Frame = -1

Query: 325 SGKGGGGGRPVALA*ACRMYASYIRPACSSPEHT--------------SVHCCAVSARRS 188
           +GK GG GRP     A    A+ +   C+    T              ++   +VS   +
Sbjct: 175 AGKDGGNGRPSTRETAVASAAAVVAAQCAQMAETMGANRDQLSTMIGSAMTGTSVSEILT 234

Query: 187 LPVSGSRCLRGAATLKVR 134
           L  S +  LRGAATLK R
Sbjct: 235 LTASATTSLRGAATLKAR 252


>At3g14480.1 68416.m01834 glycine/proline-rich protein contains 1
           predicted transmembrane domain;
          Length = 175

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -1

Query: 364 SSCSDGVLEEAWCSGKGGGGG 302
           SSCS G      C G GGGGG
Sbjct: 140 SSCSGGGSHGHGCGGGGGGGG 160


>At1g22400.1 68414.m02801 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 489

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 422 WQFLLEELAAGAPGICW 472
           W  +LE L+ G P +CW
Sbjct: 384 WNSILESLSCGVPMVCW 400


>At3g17860.2 68416.m02277 expressed protein
          Length = 339

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 129 PISRTAS-RRFCPISQDRLARSRPHCRSQESWTPCR 25
           P++R AS  RF    ++R+    P+C  ++S T CR
Sbjct: 289 PLARKASLARFLEKRKERVTSVSPYCLDKKSSTDCR 324


>At3g17860.1 68416.m02276 expressed protein
          Length = 352

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -2

Query: 129 PISRTAS-RRFCPISQDRLARSRPHCRSQESWTPCR 25
           P++R AS  RF    ++R+    P+C  ++S T CR
Sbjct: 302 PLARKASLARFLEKRKERVTSVSPYCLDKKSSTDCR 337


>At1g78270.1 68414.m09121 UDP-glucose glucosyltransferase, putative
           similar to UDP-glucose glucosyltransferase GI:3928543
           from [Arabidopsis thaliana]
          Length = 489

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 422 WQFLLEELAAGAPGICW 472
           W   LE L AG P ICW
Sbjct: 383 WNSTLESLYAGVPMICW 399


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,968,503
Number of Sequences: 28952
Number of extensions: 263286
Number of successful extensions: 909
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1171109464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)