Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0343
         (741 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060936-1|AAL28484.1|  585|Drosophila melanogaster GM07803p pro...    30   3.8  
AE014134-1643|AAS64663.1| 1494|Drosophila melanogaster CG33298-P...    30   3.8  
AE014134-1642|AAS64662.1| 1517|Drosophila melanogaster CG33298-P...    30   3.8  
AY051916-1|AAK93340.1|  968|Drosophila melanogaster LD40339p pro...    29   8.8  
AE014296-1051|AAF50712.1|  259|Drosophila melanogaster CG6580-PA...    29   8.8  
AE014296-1003|AAN12111.1|  968|Drosophila melanogaster CG5505-PB...    29   8.8  
AE014296-1002|AAN12110.1| 1015|Drosophila melanogaster CG5505-PE...    29   8.8  
AE013599-813|AAF58973.1|  184|Drosophila melanogaster CG2412-PA ...    29   8.8  

>AY060936-1|AAL28484.1|  585|Drosophila melanogaster GM07803p
           protein.
          Length = 585

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -1

Query: 240 YLFTLVVDPVCLAVWHIAVVFLALFTLHTLQRHIQAITLFTVMQRLQYLLL 88
           YLF +V D VC+  + +   +  +F       H   I L TV+  L  LLL
Sbjct: 476 YLFAIVYDSVCMNCFGVRSSYWVIFVCFASAVHWLVIMLSTVVAVLPRLLL 526


>AE014134-1643|AAS64663.1| 1494|Drosophila melanogaster CG33298-PA,
            isoform A protein.
          Length = 1494

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -1

Query: 240  YLFTLVVDPVCLAVWHIAVVFLALFTLHTLQRHIQAITLFTVMQRLQYLLL 88
            YLF +V D VC+  + +   +  +F       H   I L TV+  L  LLL
Sbjct: 1408 YLFAIVYDSVCMNCFGVRSSYWVIFVCFASAVHWLVIMLSTVVAVLPRLLL 1458


>AE014134-1642|AAS64662.1| 1517|Drosophila melanogaster CG33298-PB,
            isoform B protein.
          Length = 1517

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -1

Query: 240  YLFTLVVDPVCLAVWHIAVVFLALFTLHTLQRHIQAITLFTVMQRLQYLLL 88
            YLF +V D VC+  + +   +  +F       H   I L TV+  L  LLL
Sbjct: 1408 YLFAIVYDSVCMNCFGVRSSYWVIFVCFASAVHWLVIMLSTVVAVLPRLLL 1458


>AY051916-1|AAK93340.1|  968|Drosophila melanogaster LD40339p
           protein.
          Length = 968

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 237 LFTLVVDPVCLAVWHIAVVFLALFT 163
           L+ L + P CL +WH+  +   LFT
Sbjct: 14  LYKLFLSPCCLLLWHVLKLSTVLFT 38


>AE014296-1051|AAF50712.1|  259|Drosophila melanogaster CG6580-PA
           protein.
          Length = 259

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 468 NGYDLFQAQTVLRLQLNFQNGHGNDWQWHGS 560
           NGY  ++ +    + L F NG+G  W   GS
Sbjct: 39  NGYPAYEGKVPYIVALRFDNGNGGGWYCGGS 69


>AE014296-1003|AAN12111.1|  968|Drosophila melanogaster CG5505-PB,
           isoform B protein.
          Length = 968

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 237 LFTLVVDPVCLAVWHIAVVFLALFT 163
           L+ L + P CL +WH+  +   LFT
Sbjct: 14  LYKLFLSPCCLLLWHVLKLSTVLFT 38


>AE014296-1002|AAN12110.1| 1015|Drosophila melanogaster CG5505-PE,
           isoform E protein.
          Length = 1015

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 237 LFTLVVDPVCLAVWHIAVVFLALFT 163
           L+ L + P CL +WH+  +   LFT
Sbjct: 14  LYKLFLSPCCLLLWHVLKLSTVLFT 38


>AE013599-813|AAF58973.1|  184|Drosophila melanogaster CG2412-PA
           protein.
          Length = 184

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = -2

Query: 434 QPKRRARDVEPRAARKHLKGSDFGNSSLKKDLHKLLQ*F-YRFNIEIHSDIVRKKVVMN 261
           Q   RAR+V+  A+ + +KG     ++   D++ LL+ F ++   E H+ +  K V+++
Sbjct: 68  QDMLRAREVDEEASERAMKGIRVVQAATGADINDLLKSFDHQLTAETHASMQTKLVLID 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,889,167
Number of Sequences: 53049
Number of extensions: 696573
Number of successful extensions: 2109
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2109
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)