Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0341
(545 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate de... 90 4e-18
CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein. 90 4e-18
BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,... 90 4e-18
AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase pr... 90 4e-18
AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein. 90 4e-18
BC014340-1|AAH14340.1| 234|Homo sapiens LDHAL6A protein protein. 36 0.12
AY581313-1|AAS93432.1| 332|Homo sapiens lactate dehydrogenase p... 36 0.12
AK131523-1|BAD18662.1| 332|Homo sapiens protein ( Homo sapiens ... 36 0.12
BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein. 33 0.86
AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens ... 33 0.86
AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens ... 33 0.86
AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein. 33 0.86
AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC... 33 0.86
EF036494-1|ABO65080.1| 177|Homo sapiens SEC13-like 1 isoform pr... 32 1.5
BC091506-1|AAH91506.1| 322|Homo sapiens SEC13 homolog (S. cerev... 32 1.5
BC006167-1|AAH06167.1| 264|Homo sapiens SEC13 protein protein. 32 1.5
BC002634-1|AAH02634.2| 325|Homo sapiens SEC13 homolog (S. cerev... 32 1.5
AK223019-1|BAD96739.1| 322|Homo sapiens SEC13-like 1 isoform b ... 32 1.5
AB209554-1|BAD92791.1| 303|Homo sapiens SEC13-like 1 isoform b ... 32 1.5
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 31 3.5
AB209706-1|BAD92943.1| 252|Homo sapiens hypothetical protein FL... 30 6.1
S74659-1|AAC60643.2| 102|Homo sapiens aggrecan keratan sulfate ... 29 8.0
L27476-1|AAA61300.1| 1116|Homo sapiens X104 protein. 29 8.0
BC027592-1|AAH27592.1| 1190|Homo sapiens tight junction protein ... 29 8.0
AL358113-3|CAM13389.1| 1043|Homo sapiens tight junction protein ... 29 8.0
AL358113-2|CAH70868.1| 1190|Homo sapiens tight junction protein ... 29 8.0
AL358113-1|CAH70867.1| 993|Homo sapiens tight junction protein ... 29 8.0
AF489824-1|AAM28524.1| 993|Homo sapiens tight junction protein ... 29 8.0
AF177533-4|AAD56219.2| 1020|Homo sapiens tight junction protein ... 29 8.0
AF177533-3|AAC02527.2| 1167|Homo sapiens tight junction protein ... 29 8.0
AF177533-2|AAD56218.2| 1043|Homo sapiens tight junction protein ... 29 8.0
AF177533-1|AAD20387.2| 1190|Homo sapiens tight junction protein ... 29 8.0
>DQ402957-1|ABD77290.1| 305|Homo sapiens mitochondrial malate
dehydrogenase 2, NAD protein.
Length = 305
Score = 90.2 bits (214), Expect = 4e-18
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +1
Query: 361 DVVVIPAGVPRKPGMTRDDLFNTNAXIVRDIALSIAXNAPKAIVDMITNPVNSTVPIDSE 540
DVVVIPAGVPRKPGMTRDDLFNTNA IV + + A + P+A++ +I NPVNST+PI +E
Sbjct: 73 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVNSTIPITAE 132
Query: 541 V 543
V
Sbjct: 133 V 133
Score = 78.6 bits (185), Expect = 1e-14
Identities = 41/71 (57%), Positives = 48/71 (67%)
Frame = +2
Query: 143 QRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGH 322
Q N K IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+
Sbjct: 1 QNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGY 59
Query: 323 KGPEELSAAIK 355
GPE+L +K
Sbjct: 60 LGPEQLPDCLK 70
>CR536548-1|CAG38785.1| 338|Homo sapiens MDH2 protein.
Length = 338
Score = 90.2 bits (214), Expect = 4e-18
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +1
Query: 361 DVVVIPAGVPRKPGMTRDDLFNTNAXIVRDIALSIAXNAPKAIVDMITNPVNSTVPIDSE 540
DVVVIPAGVPRKPGMTRDDLFNTNA IV + + A + P+A++ +I NPVNST+PI +E
Sbjct: 94 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVNSTIPITAE 153
Query: 541 V 543
V
Sbjct: 154 V 154
Score = 89.8 bits (213), Expect = 5e-18
Identities = 48/95 (50%), Positives = 64/95 (67%)
Frame = +2
Query: 71 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 250
M S ++P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALVRPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 251 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIK 355
IA TPGVAADLSH+ T A V G+ GPE+L +K
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLK 91
>BC001917-1|AAH01917.1| 338|Homo sapiens malate dehydrogenase 2,
NAD (mitochondrial) protein.
Length = 338
Score = 90.2 bits (214), Expect = 4e-18
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +1
Query: 361 DVVVIPAGVPRKPGMTRDDLFNTNAXIVRDIALSIAXNAPKAIVDMITNPVNSTVPIDSE 540
DVVVIPAGVPRKPGMTRDDLFNTNA IV + + A + P+A++ +I NPVNST+PI +E
Sbjct: 94 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVNSTIPITAE 153
Query: 541 V 543
V
Sbjct: 154 V 154
Score = 89.0 bits (211), Expect = 9e-18
Identities = 48/95 (50%), Positives = 63/95 (66%)
Frame = +2
Query: 71 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 250
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 251 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIK 355
IA TPGVAADLSH+ T A V G+ GPE+L +K
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLK 91
>AF047470-1|AAC03787.1| 338|Homo sapiens malate dehydrogenase
precursor protein.
Length = 338
Score = 90.2 bits (214), Expect = 4e-18
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +1
Query: 361 DVVVIPAGVPRKPGMTRDDLFNTNAXIVRDIALSIAXNAPKAIVDMITNPVNSTVPIDSE 540
DVVVIPAGVPRKPGMTRDDLFNTNA IV + + A + P+A++ +I NPVNST+PI +E
Sbjct: 94 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVNSTIPITAE 153
Query: 541 V 543
V
Sbjct: 154 V 154
Score = 89.0 bits (211), Expect = 9e-18
Identities = 48/95 (50%), Positives = 63/95 (66%)
Frame = +2
Query: 71 MFSRALKPAALAVQNGAKNFSTTSQRNFKXXXXXXXXXIGQPLALLLKQNPLVTRLALYD 250
M S +P + A++ ++FST++Q N K IGQPL+LLLK +PLV+RL LYD
Sbjct: 1 MLSALARPVSAALR---RSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 57
Query: 251 IAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIK 355
IA TPGVAADLSH+ T A V G+ GPE+L +K
Sbjct: 58 IAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLK 91
>AC005077-1|AAS07425.1| 316|Homo sapiens unknown protein.
Length = 316
Score = 90.2 bits (214), Expect = 4e-18
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +1
Query: 361 DVVVIPAGVPRKPGMTRDDLFNTNAXIVRDIALSIAXNAPKAIVDMITNPVNSTVPIDSE 540
DVVVIPAGVPRKPGMTRDDLFNTNA IV + + A + P+A++ +I NPVNST+PI +E
Sbjct: 72 DVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVNSTIPITAE 131
Query: 541 V 543
V
Sbjct: 132 V 132
Score = 76.6 bits (180), Expect = 5e-14
Identities = 38/57 (66%), Positives = 45/57 (78%)
Frame = +2
Query: 185 IGQPLALLLKQNPLVTRLALYDIAPVTPGVAADLSHMNTPAKVSGHKGPEELSAAIK 355
IGQPL+LLLK +PLV+RL LYDIA TPGVAADLSH+ T A V G+ GPE+L +K
Sbjct: 14 IGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIETKAAVKGYLGPEQLPDCLK 69
>BC014340-1|AAH14340.1| 234|Homo sapiens LDHAL6A protein protein.
Length = 234
Score = 35.5 bits (78), Expect = 0.12
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1
Query: 355 DADVVVIPAGVPRKPGMTRDDLFNTNAXIVRDIALSIAXNAPKAIVDMITNPVN 516
++++V+I AG +K G TR DL N I + + +I +P + ++TNPV+
Sbjct: 88 NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYSPHCKLLIVTNPVD 141
>AY581313-1|AAS93432.1| 332|Homo sapiens lactate dehydrogenase
protein.
Length = 332
Score = 35.5 bits (78), Expect = 0.12
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1
Query: 355 DADVVVIPAGVPRKPGMTRDDLFNTNAXIVRDIALSIAXNAPKAIVDMITNPVN 516
++++V+I AG +K G TR DL N I + + +I +P + ++TNPV+
Sbjct: 88 NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYSPHCKLLIVTNPVD 141
>AK131523-1|BAD18662.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ43406 fis, clone OCBBF2019823, highly similar
to Homo sapiens lactate dehydrogenase A -like (LDHL). ).
Length = 332
Score = 35.5 bits (78), Expect = 0.12
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +1
Query: 355 DADVVVIPAGVPRKPGMTRDDLFNTNAXIVRDIALSIAXNAPKAIVDMITNPVN 516
++++V+I AG +K G TR DL N I + + +I +P + ++TNPV+
Sbjct: 88 NSNLVIITAGARQKKGETRLDLVQRNVSIFKLMIPNITQYSPHCKLLIVTNPVD 141
>BC008735-1|AAH08735.2| 627|Homo sapiens FBXL10 protein protein.
Length = 627
Score = 32.7 bits (71), Expect = 0.86
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 167 RPPL*SSSVMWWKSSLHHFVQQ 102
RPPL SS WW+SSL +F QQ
Sbjct: 125 RPPLGSSLSPWWRSSLTYFQQQ 146
>AK027692-1|BAB55301.1| 653|Homo sapiens protein ( Homo sapiens
cDNA FLJ14786 fis, clone NT2RP4000737, moderately
similar to Mus musculus F-box protein FBL10 mRNA. ).
Length = 653
Score = 32.7 bits (71), Expect = 0.86
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 167 RPPL*SSSVMWWKSSLHHFVQQ 102
RPPL SS WW+SSL +F QQ
Sbjct: 151 RPPLGSSLSPWWRSSLTYFQQQ 172
>AK027440-1|BAB55112.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ14534 fis, clone NT2RM2000599, weakly similar to
Homo sapiens F-box protein Lilina (LILINA) mRNA. ).
Length = 704
Score = 32.7 bits (71), Expect = 0.86
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 167 RPPL*SSSVMWWKSSLHHFVQQ 102
RPPL SS WW+SSL +F QQ
Sbjct: 202 RPPLGSSLSPWWRSSLTYFQQQ 223
>AJ459424-1|CAD30700.1| 1336|Homo sapiens JEMMA protein protein.
Length = 1336
Score = 32.7 bits (71), Expect = 0.86
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 167 RPPL*SSSVMWWKSSLHHFVQQ 102
RPPL SS WW+SSL +F QQ
Sbjct: 834 RPPLGSSLSPWWRSSLTYFQQQ 855
>AB031230-1|BAA97672.1| 827|Homo sapiens protein containing CXXC
domain 2 protein.
Length = 827
Score = 32.7 bits (71), Expect = 0.86
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1
Query: 167 RPPL*SSSVMWWKSSLHHFVQQ 102
RPPL SS WW+SSL +F QQ
Sbjct: 358 RPPLGSSLSPWWRSSLTYFQQQ 379
>EF036494-1|ABO65080.1| 177|Homo sapiens SEC13-like 1 isoform
protein.
Length = 177
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 408 GHSRFTGYSCWDDYNISILMAADSSSGPLWPLTLAGVFMWE 286
GH CW ++ +++A SS G + LT G WE
Sbjct: 101 GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141
>BC091506-1|AAH91506.1| 322|Homo sapiens SEC13 homolog (S.
cerevisiae) protein.
Length = 322
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 408 GHSRFTGYSCWDDYNISILMAADSSSGPLWPLTLAGVFMWE 286
GH CW ++ +++A SS G + LT G WE
Sbjct: 101 GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141
>BC006167-1|AAH06167.1| 264|Homo sapiens SEC13 protein protein.
Length = 264
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 408 GHSRFTGYSCWDDYNISILMAADSSSGPLWPLTLAGVFMWE 286
GH CW ++ +++A SS G + LT G WE
Sbjct: 43 GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 83
>BC002634-1|AAH02634.2| 325|Homo sapiens SEC13 homolog (S.
cerevisiae) protein.
Length = 325
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 408 GHSRFTGYSCWDDYNISILMAADSSSGPLWPLTLAGVFMWE 286
GH CW ++ +++A SS G + LT G WE
Sbjct: 104 GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 144
>AK223019-1|BAD96739.1| 322|Homo sapiens SEC13-like 1 isoform b
variant protein.
Length = 322
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 408 GHSRFTGYSCWDDYNISILMAADSSSGPLWPLTLAGVFMWE 286
GH CW ++ +++A SS G + LT G WE
Sbjct: 101 GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141
>AB209554-1|BAD92791.1| 303|Homo sapiens SEC13-like 1 isoform b
variant protein.
Length = 303
Score = 31.9 bits (69), Expect = 1.5
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 408 GHSRFTGYSCWDDYNISILMAADSSSGPLWPLTLAGVFMWE 286
GH CW ++ +++A SS G + LT G WE
Sbjct: 95 GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 135
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 30.7 bits (66), Expect = 3.5
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 190 PAFGPSTEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRP 321
P G TE + G A + ++ +P PFP E PS + P
Sbjct: 761 PPTGAETEESTEGPSATEVPSASEEPSPSEVPFPSEEPSPSEEP 804
>AB209706-1|BAD92943.1| 252|Homo sapiens hypothetical protein
FLJ20531 variant protein.
Length = 252
Score = 29.9 bits (64), Expect = 6.1
Identities = 23/64 (35%), Positives = 27/64 (42%)
Frame = -1
Query: 350 WLLIAPQVPCGR*PWLGCSCGKGRLRRRGSQALCRIKPAWSPEDSASVEGPKAGRYHRRH 171
WL Q G P L C R GSQA PAW ED+A + GPK R +
Sbjct: 1 WLRQKGQGRPGMWPSLEALCSLFAARSTGSQAQSAPTPAWD-EDTAQI-GPKRIRKAAKR 58
Query: 170 QRPP 159
+ P
Sbjct: 59 ELMP 62
>S74659-1|AAC60643.2| 102|Homo sapiens aggrecan keratan sulfate
domain protein.
Length = 102
Score = 29.5 bits (63), Expect = 8.0
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 199 GPSTEAESSGDQAGFIRHSACDPRRRSRPFPHEHPSQGQRP 321
G +TE + G A + ++ +P PFP E PS + P
Sbjct: 1 GAATEESTEGPSATEVPSASEEPSPSEVPFPSEEPSPSEEP 41
>L27476-1|AAA61300.1| 1116|Homo sapiens X104 protein.
Length = 1116
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 178 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 342
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>BC027592-1|AAH27592.1| 1190|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 1190
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 178 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 342
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AL358113-3|CAM13389.1| 1043|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 1043
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 178 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 342
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AL358113-2|CAH70868.1| 1190|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 1190
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 178 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 342
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AL358113-1|CAH70867.1| 993|Homo sapiens tight junction protein 2
(zona occludens 2) protein.
Length = 993
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 178 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 342
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AF489824-1|AAM28524.1| 993|Homo sapiens tight junction protein 2
protein.
Length = 993
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 178 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 342
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AF177533-4|AAD56219.2| 1020|Homo sapiens tight junction protein
ZO-2 isoform C protein.
Length = 1020
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 178 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 342
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 228 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 283
>AF177533-3|AAC02527.2| 1167|Homo sapiens tight junction protein
ZO-2 isoform C protein.
Length = 1167
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 178 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 342
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 228 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 283
>AF177533-2|AAD56218.2| 1043|Homo sapiens tight junction protein
ZO-2 isoform A protein.
Length = 1043
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 178 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 342
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
>AF177533-1|AAD20387.2| 1190|Homo sapiens tight junction protein
ZO-2 isoform A protein.
Length = 1190
Score = 29.5 bits (63), Expect = 8.0
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = +1
Query: 178 RWYRPAFGPSTEAESSGDQAGFIRHSACD--PRRRSRPFPHEHPSQGQRPQGT*GAI 342
R Y A+ P E S + RH A PR RSR PH S P+G G I
Sbjct: 251 RAYHRAYDPDYERAYSPEYRRGARHDARSRGPRSRSREHPHSR-SPSPEPRGRPGPI 306
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,370,693
Number of Sequences: 237096
Number of extensions: 2050292
Number of successful extensions: 4635
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4618
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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