Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0339
         (382 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   4.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   4.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   4.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   7.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    20   7.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   9.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   9.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   9.6  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 207 HTSPPPSLHSMNPPGPSLHCR*NQTTNDTVL 299
           H   PP LH   P   SL+ +   T++  +L
Sbjct: 99  HQIRPPILHDTQPMCESLNTQPPVTSSSNIL 129


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 207 HTSPPPSLHSMNPPGPSLHCR*NQTTNDTVL 299
           H   PP LH   P   SL+ +   T++  +L
Sbjct: 99  HQIRPPILHDTQPMCESLNTQPPVTSSSNIL 129


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 207 HTSPPPSLHSMNPPGPSLHCR*NQTTNDTVL 299
           H   PP LH   P   SL+ +   T++  +L
Sbjct: 99  HQIRPPILHDTQPMCESLNTQPPVTSSSNIL 129


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +1

Query: 133 PFPCAAEPSRTPSAPRCLRWH 195
           PF   A+P+     P   RWH
Sbjct: 383 PFGVMADPAVDLRDPLFFRWH 403


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 212 LASSLPSLDEPSRALSALSLESDDKRYSPVYKFPSITYCQE 334
           LA+S+   D     LSA  L    KR+ PVY    + + Q+
Sbjct: 147 LAASVIFFDVVVWGLSASDLGVFFKRFLPVYVSYLLIFVQQ 187


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 317 ITYCQETKNDYLY 355
           I YCQE   D+L+
Sbjct: 74  IFYCQEGSVDFLF 86


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 317 ITYCQETKNDYLY 355
           I YCQE   D+L+
Sbjct: 307 IFYCQEGSVDFLF 319


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 317 ITYCQETKNDYLY 355
           I YCQE   D+L+
Sbjct: 307 IFYCQEGSVDFLF 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,835
Number of Sequences: 336
Number of extensions: 2009
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)