Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0339
(382 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0309 + 2312786-2313211,2313311-2313527,2313613-2313731,231... 31 0.23
08_02_0742 - 20630313-20630798 30 0.54
11_06_0135 - 20470247-20470906 30 0.71
03_05_1094 - 30348366-30348467,30348571-30348753,30348833-303489... 29 0.94
09_04_0434 - 17533633-17534637 28 2.2
01_06_0405 + 29103723-29103839,29103928-29104012,29104572-291046... 28 2.2
02_04_0021 + 18975992-18976408 27 3.8
02_03_0223 + 16570264-16570357,16570470-16570552,16570974-165710... 27 3.8
02_04_0563 - 23895573-23895614,23896330-23896390,23896901-238970... 27 5.0
01_01_0175 - 1503254-1503575,1504398-1504657,1506162-1507028 27 5.0
10_08_0603 - 19120434-19120538,19121209-19121310,19121430-191214... 27 6.6
09_06_0072 - 20682424-20682870,20683928-20684854 27 6.6
06_01_0486 - 3455030-3455770 27 6.6
06_01_0450 + 3185342-3185645,3185761-3185837,3185948-3186028,318... 27 6.6
04_04_0387 + 24869594-24871480 27 6.6
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 27 6.6
12_01_0543 - 4271380-4272218,4272258-4272873 26 8.7
11_06_0610 - 25449085-25453284 26 8.7
11_06_0025 - 19341127-19341339,19341426-19341620,19341912-193420... 26 8.7
10_08_0666 - 19691985-19692216,19692327-19692404,19692508-196928... 26 8.7
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 26 8.7
10_04_0020 + 7644329-7644666,7644960-7645146,7645311-7645365,764... 26 8.7
09_04_0269 + 16265191-16265472,16265574-16266149 26 8.7
04_03_0610 - 17972032-17972835 26 8.7
04_03_0557 + 17107919-17108296 26 8.7
03_02_0637 - 10009580-10009903,10013314-10014153 26 8.7
02_05_1131 - 34328168-34328557,34328838-34328957,34329067-343291... 26 8.7
01_07_0015 + 40469839-40470672,40471185-40471229,40471255-40471266 26 8.7
01_06_0777 + 31919196-31919909,31919984-31920082 26 8.7
01_06_0159 + 27089006-27089064,27089925-27090007,27090414-270905... 26 8.7
>11_01_0309 +
2312786-2313211,2313311-2313527,2313613-2313731,
2313921-2314019,2314498-2314551,2314635-2314733,
2314838-2314945,2315418-2315694,2316051-2316160,
2316425-2316493,2316608-2316714,2316754-2316792,
2317126-2317171,2317593-2317619
Length = 598
Score = 31.5 bits (68), Expect = 0.23
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 21 SSGSPCTRCIHPKNTSESSIQTICPYWCNGPGPLRATAISV 143
S+G+ C R +HP T+ + P C P P+RA A+SV
Sbjct: 472 STGACCLRLVHPV-TTLIGVLYADPCGCRFPHPIRAEAVSV 511
>08_02_0742 - 20630313-20630798
Length = 161
Score = 30.3 bits (65), Expect = 0.54
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +3
Query: 219 PPSLHSMNPPGPSLHC 266
PPSL S PP PS HC
Sbjct: 27 PPSLRSSTPPDPSCHC 42
>11_06_0135 - 20470247-20470906
Length = 219
Score = 29.9 bits (64), Expect = 0.71
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 212 LASSLPSLDEPSRALSALSLESDDKRYSPVYKF 310
LAS SLD+ S+A+S L + D +RY V F
Sbjct: 126 LASCAASLDDVSKAMSGLPADIDVERYPKVQSF 158
>03_05_1094 -
30348366-30348467,30348571-30348753,30348833-30348934,
30349617-30349967,30350049-30350276,30350353-30350509,
30351189-30351370,30351443-30351866,30351949-30352892,
30353509-30353773,30354558-30355120
Length = 1166
Score = 29.5 bits (63), Expect = 0.94
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 254 LSALSLESDDKRYSPVYKFPSITYCQE 334
LS L + DD+ Y+P FPS++ C+E
Sbjct: 797 LSRLQIILDDQGYTPRSPFPSVSLCKE 823
>09_04_0434 - 17533633-17534637
Length = 334
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +1
Query: 55 PRIRAKAPSRRSALIGATGLAP*ERLPFPCAAEPSRTPSAPRCLRWHPTCRTPRLLPP 228
PR + P SA + P E PC A P+ + W P RTP PP
Sbjct: 278 PRQLRRPPPHLSAAAAVSAAQPVE----PCGAPMYACHPQPQEVMWPPPARTPHPPPP 331
>01_06_0405 +
29103723-29103839,29103928-29104012,29104572-29104674,
29104798-29104882,29105414-29105497,29105627-29105730,
29106522-29106783,29106978-29107414,29107637-29107718,
29109913-29110089,29110640-29110732,29110812-29110877,
29110992-29111038,29111165-29111430,29111443-29111845,
29111992-29112376
Length = 931
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 69 ESSIQTICPYWCNGPGPLRATAISVCGGT 155
E S++ C Y CN P P + +++C G+
Sbjct: 810 EYSVEEYCTY-CNAPVPFESADVAMCSGS 837
>02_04_0021 + 18975992-18976408
Length = 138
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/56 (23%), Positives = 17/56 (30%)
Frame = +3
Query: 90 CPYWCNGPGPLRATAISVCGGTXXXXXXXXXXXXXXHMPHTSPPPSLHSMNPPGPS 257
C + C GP + C P +PPP + PP PS
Sbjct: 64 CAFGCMAKGPDTTLCVVSCNQNSIVCMVRCALTPPPPKPKPTPPPPAPTPKPPAPS 119
>02_03_0223 +
16570264-16570357,16570470-16570552,16570974-16571032,
16571607-16571665,16572276-16572325,16573575-16573612,
16574619-16574695,16575593-16576503
Length = 456
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 142 CAAEPSRTPSAPRCLRWHPT 201
C P R PS CL W PT
Sbjct: 222 CTPPPPRRPSRRGCLSWRPT 241
>02_04_0563 -
23895573-23895614,23896330-23896390,23896901-23897025,
23897217-23897302,23898052-23898167,23898274-23898336,
23898451-23898530,23898751-23898871,23899419-23899501,
23900081-23900155,23900436-23900936
Length = 450
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 14 EGVERFSLYEVYPSQEYERKLHPDDLPLLVQRAWPP 121
E + L + P + + K +PDDL L+Q W P
Sbjct: 390 EAAKMICLEGMRPPFKNKPKYYPDDLRELIQECWDP 425
>01_01_0175 - 1503254-1503575,1504398-1504657,1506162-1507028
Length = 482
Score = 27.1 bits (57), Expect = 5.0
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 212 LASSLPSLDEPSRALSALSLESD---DKRYSPVYKFPSITY 325
+A+S P LD P R+ SALSL S +R + Y+F I+Y
Sbjct: 66 VAASSPLLD-PLRSASALSLLSTRWPTRRSNEAYRFTDISY 105
>10_08_0603 -
19120434-19120538,19121209-19121310,19121430-19121462,
19122049-19122216,19122311-19122373,19122514-19122624,
19122926-19123035,19123150-19123446,19123632-19123710,
19123811-19123919,19124000-19124041,19124743-19124873,
19126150-19126797
Length = 665
Score = 26.6 bits (56), Expect = 6.6
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 283 QTIQSCIQIPKHNILPGNKKRLS 351
+TI C Q P+ +++PGN + L+
Sbjct: 624 RTINKCFQYPRLSLIPGNLEMLN 646
>09_06_0072 - 20682424-20682870,20683928-20684854
Length = 457
Score = 26.6 bits (56), Expect = 6.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 236 DEPSRALSALSLESDDKRYSPVYKFPS 316
DEP+ A ++ SL+SDD + + PS
Sbjct: 4 DEPAAAAASTSLDSDDSFFDALDSLPS 30
>06_01_0486 - 3455030-3455770
Length = 246
Score = 26.6 bits (56), Expect = 6.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 160 RTPSAPRCLRWHPTCRTPRLLPPFTR*TLPGP 255
+ P +PRC HP P PP T +P P
Sbjct: 65 KPPPSPRCPSCHPPYTPPTPRPPPTPPYVPSP 96
>06_01_0450 +
3185342-3185645,3185761-3185837,3185948-3186028,
3186508-3186636,3186765-3186851,3186962-3187015,
3187432-3187522,3187615-3187685,3187770-3187839,
3187988-3188040,3188132-3188225,3188569-3188666,
3190126-3190209
Length = 430
Score = 26.6 bits (56), Expect = 6.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 164 VREGSAAHGNGSRSQGARPVAP--IRADRLDGAFAR 63
+R +AA G GS+ + A VAP +RA LD +R
Sbjct: 61 IRGATAAAGGGSKMEAAAAVAPSGLRASFLDVLLSR 96
>04_04_0387 + 24869594-24871480
Length = 628
Score = 26.6 bits (56), Expect = 6.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 160 RTPSAPRCLRWHPTCRTPRLLPPFTR*TLPGPLCTVVRIRRQT 288
+TP +PR LR +P RL+ P T+ P +R RR +
Sbjct: 14 KTPQSPRLLRRNPHYSGLRLVHPLLLATVSPPPPAALRRRRNS 56
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 26.6 bits (56), Expect = 6.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 198 HMPHTSPPPSLHSMNPPGP 254
H PPP + +NPPGP
Sbjct: 1207 HPNQMPPPPPIAPLNPPGP 1225
>12_01_0543 - 4271380-4272218,4272258-4272873
Length = 484
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 118 P*ERLPFPCAAEPSRTPSAPRCLRWHPTCRTPRLLPPFT 234
P ++L P +PS TP + R W +TP PP T
Sbjct: 442 PAKKLEQPAQRKPSSTPKSKRA--WKEKPKTPAPSPPET 478
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 198 HMPHTSPPPSLHSMNPPGPS 257
H P +S PPS S PP P+
Sbjct: 951 HTPESSSPPSEESEPPPSPT 970
>11_06_0025 -
19341127-19341339,19341426-19341620,19341912-19342088,
19342505-19342672,19343533-19343574,19344129-19344214,
19345218-19345545
Length = 402
Score = 26.2 bits (55), Expect = 8.7
Identities = 20/55 (36%), Positives = 25/55 (45%)
Frame = +1
Query: 64 RAKAPSRRSALIGATGLAP*ERLPFPCAAEPSRTPSAPRCLRWHPTCRTPRLLPP 228
R +A S S+ A +AP P+P + P RTPSA PT LPP
Sbjct: 48 RIEAASDTSS--AAAPVAP-TAAPWPPSPPPPRTPSAASTSSCRPTVAPAVPLPP 99
>10_08_0666 -
19691985-19692216,19692327-19692404,19692508-19692837,
19692913-19693158,19693224-19693483,19694469-19695023
Length = 566
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 91 ALIGATGLAP*ERLPFPCAAEPSRTPSAPRCL-RWH 195
A++ A G AP RLPFP A RCL WH
Sbjct: 227 AVLAAAGGAPSRRLPFPAGA--FDMAHCGRCLVPWH 260
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 26.2 bits (55), Expect = 8.7
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = +1
Query: 64 RAKAPSRRSALIGATGLAP*ERLPFPCAAEPSRTPSAPRCLRWHPTCR 207
R PS S T A +P P AA P P APR R P R
Sbjct: 262 RRSLPSLTSDFFPTTPAAA--PVPAPAAAAPPPAPPAPRSRRTPPRTR 307
>10_04_0020 +
7644329-7644666,7644960-7645146,7645311-7645365,
7645390-7645438,7645984-7646200
Length = 281
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 55 PRIRAKAPSRRSALIGATGLAP*ERLPFPCAAEPSRTPS 171
P+ +A+ RR A GL RLPF C E TPS
Sbjct: 21 PKAKAETRRRREPAFFAHGL---HRLPFRCRLELLPTPS 56
>09_04_0269 + 16265191-16265472,16265574-16266149
Length = 285
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 76 PSRRSALIGATGLAP*ERLPFPCAAEPSRTPSAPRCLRWHPTC 204
P R L GA RL F R P RCL W+ C
Sbjct: 170 PRPRLPLAGAPPTIRRRRLEFRRCFNCYRPPDHRRCLTWYQVC 212
>04_03_0610 - 17972032-17972835
Length = 267
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +3
Query: 54 PKNTSESSIQTICPYWCNGPGPLRATAISVCGG 152
P+ SS+ T C CN G L + + C G
Sbjct: 101 PQQLESSSLTTGCVATCNSQGDLASLSDGTCSG 133
>04_03_0557 + 17107919-17108296
Length = 125
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 158 EGSAAHGNGSRSQGARPVAPIRADRLDGAFARILGMD 48
EG+A HG + VAP + RL+ A A LG+D
Sbjct: 40 EGAARHGIDVAVRRLAMVAPSSSARLEDAVAPELGVD 76
>03_02_0637 - 10009580-10009903,10013314-10014153
Length = 387
Score = 26.2 bits (55), Expect = 8.7
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 43 GVSIPRIRAKAPSRR-SALIGATGL--AP*ERLPFPCAAEPSRTPSAPRCLRW 192
G +IP KAPS R S+L G GL P + P E +R +A C W
Sbjct: 26 GATIPERYVKAPSERPSSLDGGGGLNNIPVVDMSMPDGEETARAVAA-ACREW 77
>02_05_1131 -
34328168-34328557,34328838-34328957,34329067-34329185,
34329659-34329767,34329847-34329885,34341125-34341203,
34341483-34341547,34341850-34341905,34342141-34342233,
34342312-34342579
Length = 445
Score = 26.2 bits (55), Expect = 8.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 24 SGSPCTRCIHPKNTSESSIQT 86
+GSPC RC++P S + Q+
Sbjct: 207 NGSPCYRCLYPNPPSSPTSQS 227
>01_07_0015 + 40469839-40470672,40471185-40471229,40471255-40471266
Length = 296
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 179 AASVGTPHAAHLASSLPSLDEPSRALS 259
A GT A+ LAS PSL P+ ALS
Sbjct: 141 ATGTGTIPASALASVAPSLPSPNSALS 167
>01_06_0777 + 31919196-31919909,31919984-31920082
Length = 270
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +1
Query: 73 APSRRSALIGATGLAP*ERLPFPCAAEPSRTPSAPRCLRWHPTCRTPRLLPP 228
AP R +A + A P+ C P PSA W P P PP
Sbjct: 60 APPRPAAAAASPSRAALPDKPWVCDPPPEPEPSASWGCGWGPPAAEPPREPP 111
>01_06_0159 +
27089006-27089064,27089925-27090007,27090414-27090588,
27091442-27091592,27091629-27091752,27092378-27092446,
27093197-27093291
Length = 251
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3
Query: 42 RCIHPKNTSESSIQTICPYWCNGPGPLRATAISVCGGT 155
R HP S+ I+ WC+G +A + GGT
Sbjct: 20 RSHHPMYASQDEIKMSSRRWCHGSPDNQAEELDEVGGT 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,103,913
Number of Sequences: 37544
Number of extensions: 246966
Number of successful extensions: 1055
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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