Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0330
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    26   0.33 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    24   1.0  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.2  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   7.2  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   7.2  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +3

Query: 477 RVSIMNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLA 656
           R  ++N +D L   +ETL   +   R+       A+ T NLE    IQ   +    GH+ 
Sbjct: 451 REFVVNYIDDLLVASETLNEHLEHLRQVFEKLKQARMTINLEKSNFIQKEVK--FLGHIL 508

Query: 657 KI 662
            I
Sbjct: 509 TI 510


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 633 VGCASVCDRSAPGSRWPGPATCRMPLSSHL 544
           V    V   +  G R PGPA  R  L +HL
Sbjct: 316 VAAVQVPQLAGGGRRGPGPARSRRHLPAHL 345


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +2

Query: 581 PGHLEPGADRSHTDAHPTNLARSSREDLRHA 673
           P H  P +D+ H   H T +  ++  D   A
Sbjct: 32  PRHFNPPSDKLHHPIHQTVIYHNNPRDPNRA 62


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +2

Query: 593 EPGADRSHTDAHPTNLARSSREDLRHALG 679
           +P  D SH   H T+L         H LG
Sbjct: 126 QPPTDNSHVHHHQTSLLGKVEGAATHHLG 154


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/18 (44%), Positives = 15/18 (83%)
 Frame = +3

Query: 492 NELDSLRQEAETLKNAIR 545
           +++ +LRQE ETLK+ ++
Sbjct: 344 DKIVALRQEQETLKSQVQ 361


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 483 SIMNELDSLRQEAETLKNAI 542
           +I N +DS+RQ ++T   A+
Sbjct: 193 AINNIIDSIRQNSQTRNQAV 212


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 483 SIMNELDSLRQEAETLKNAI 542
           +I N +DS+RQ ++T   A+
Sbjct: 193 AINNIIDSIRQNSQTRNQAV 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,740
Number of Sequences: 336
Number of extensions: 3648
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)