Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0330
         (687 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49127-9|CAA88948.1|  340|Caenorhabditis elegans Hypothetical pr...   111   3e-25
X17497-1|CAA35532.1|  340|Caenorhabditis elegans G-protein protein.   111   3e-25
AF291846-1|AAK55963.1|  340|Caenorhabditis elegans heterotrimeri...   111   3e-25
Z71263-5|CAA95824.1|  356|Caenorhabditis elegans Hypothetical pr...    47   1e-05
AF291847-1|AAK55964.1|  356|Caenorhabditis elegans heterotrimeri...    47   1e-05
Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z81017-12|CAD91635.1|  394|Caenorhabditis elegans Hypothetical p...    28   5.4  
Z78537-3|CAD91626.1|  394|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AC006769-16|AAF60588.2|  338|Caenorhabditis elegans Serpentine r...    28   7.2  
L11247-1|AAA28010.2|  484|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z49127-9|CAA88948.1|  340|Caenorhabditis elegans Hypothetical
           protein F13D12.7 protein.
          Length = 340

 Score =  111 bits (268), Expect = 3e-25
 Identities = 53/66 (80%), Positives = 58/66 (87%)
 Frame = +3

Query: 489 MNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYA 668
           M+ELD LRQEAE LK+ IR+ARK+A DT+LA   SNLEPIGRIQMRTRRTLRGHLAKIYA
Sbjct: 1   MSELDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYA 60

Query: 669 MHWGSD 686
           MHW SD
Sbjct: 61  MHWASD 66


>X17497-1|CAA35532.1|  340|Caenorhabditis elegans G-protein protein.
          Length = 340

 Score =  111 bits (268), Expect = 3e-25
 Identities = 53/66 (80%), Positives = 58/66 (87%)
 Frame = +3

Query: 489 MNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYA 668
           M+ELD LRQEAE LK+ IR+ARK+A DT+LA   SNLEPIGRIQMRTRRTLRGHLAKIYA
Sbjct: 1   MSELDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYA 60

Query: 669 MHWGSD 686
           MHW SD
Sbjct: 61  MHWASD 66


>AF291846-1|AAK55963.1|  340|Caenorhabditis elegans heterotrimeric G
           protein beta subunit1 protein.
          Length = 340

 Score =  111 bits (268), Expect = 3e-25
 Identities = 53/66 (80%), Positives = 58/66 (87%)
 Frame = +3

Query: 489 MNELDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYA 668
           M+ELD LRQEAE LK+ IR+ARK+A DT+LA   SNLEPIGRIQMRTRRTLRGHLAKIYA
Sbjct: 1   MSELDQLRQEAEQLKSQIREARKSANDTTLATVASNLEPIGRIQMRTRRTLRGHLAKIYA 60

Query: 669 MHWGSD 686
           MHW SD
Sbjct: 61  MHWASD 66


>Z71263-5|CAA95824.1|  356|Caenorhabditis elegans Hypothetical
           protein F52A8.2 protein.
          Length = 356

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = +3

Query: 498 LDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHW 677
           L+ L  EAE L+  +   R    D  + QA   L+ +G + ++ RR L+GH+ K+  M W
Sbjct: 17  LEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDVMGALGVKQRRILKGHVGKVLCMDW 76

Query: 678 GSD 686
             D
Sbjct: 77  SLD 79


>AF291847-1|AAK55964.1|  356|Caenorhabditis elegans heterotrimeric G
           protein beta subunit2 protein.
          Length = 356

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = +3

Query: 498 LDSLRQEAETLKNAIRDARKAACDTSLAQATSNLEPIGRIQMRTRRTLRGHLAKIYAMHW 677
           L+ L  EAE L+  +   R    D  + QA   L+ +G + ++ RR L+GH+ K+  M W
Sbjct: 17  LEQLANEAEELRKKLDQERHKLNDIPIQQAAERLDVMGALGVKQRRILKGHVGKVLCMDW 76

Query: 678 GSD 686
             D
Sbjct: 77  SLD 79


>Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical
           protein F14F8.13 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/46 (23%), Positives = 30/46 (65%)
 Frame = -2

Query: 389 MSLRSTLQRFSGDFYITIKIG*PLFGTFCIFSISPH*NKDISQVFI 252
           ++++S++ ++   F + I +   +FGT C+ S++ + N+++S+  I
Sbjct: 142 LNIQSSVHKYLPHFTLCIILKDAVFGTACVLSLAKYLNEEVSEFCI 187


>Z81017-12|CAD91635.1|  394|Caenorhabditis elegans Hypothetical
           protein C09F12.3 protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 300 LFNITTLKQGYFTSFYHGTIHH*LFIHPQDRSFSRPFANC 181
           +F++ TL + Y +   H T  H  F HP+  + + P A C
Sbjct: 230 IFSLLTLYEIYKSR--HNTYQHLAFDHPKQTNVTHPLAGC 267


>Z78537-3|CAD91626.1|  394|Caenorhabditis elegans Hypothetical
           protein C09F12.3 protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = -1

Query: 300 LFNITTLKQGYFTSFYHGTIHH*LFIHPQDRSFSRPFANC 181
           +F++ TL + Y +   H T  H  F HP+  + + P A C
Sbjct: 230 IFSLLTLYEIYKSR--HNTYQHLAFDHPKQTNVTHPLAGC 267


>AC006769-16|AAF60588.2|  338|Caenorhabditis elegans Serpentine
           receptor, class j protein20 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
 Frame = -3

Query: 355 AISISPLRLDNHFLAHFVSFQYHHTKTRIFHKFLS-RNNPPLAFHTPSRSVLFTAICKL- 182
           A+S  P      F A F+S  Y         ++L+ ++N  + F+     +L + I  L 
Sbjct: 82  ALSSEPAEAFIAFRASFLSGTYGILNVHFIFRYLALKSNNIIKFYFMPYGLLLSVIYVLF 141

Query: 181 RQSSWNVIGVFCAGEVNEKR 122
             S W +I  FC    +E R
Sbjct: 142 HMSVWAMIDYFCLHSASEMR 161


>L11247-1|AAA28010.2|  484|Caenorhabditis elegans Hypothetical
           protein F09G8.5 protein.
          Length = 484

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 16/83 (19%)
 Frame = -1

Query: 312 HILYLFNITTLKQGYFTSFYHGTI-HH*LFIHPQDRSF----------SRPFANCVKVPG 166
           H+   F ++ L   +F SF      HH LF+ P+ RSF          S P +N    P 
Sbjct: 29  HLFSFFLLSFLSFLHFRSFSANNFKHHSLFLVPKRRSFSISVLPAAAPSSPSSNSFLFPS 88

Query: 165 T*LVF-----SALVKLTKSATYL 112
               F     + +VKLT+SA Y+
Sbjct: 89  LSHYFYSLRDTTMVKLTESAVYI 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,502,234
Number of Sequences: 27780
Number of extensions: 362434
Number of successful extensions: 916
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)