Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0330
         (687 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   8.3  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   8.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.3  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 205 LFTAICKLRQSSWNVIGV 152
           L T  C  + + WNV+GV
Sbjct: 430 LLTMSCSDKIARWNVLGV 447


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 205 GPILRVYEKLMVD 243
           GP+LR++ K M+D
Sbjct: 227 GPLLRIFTKHMLD 239


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 205 GPILRVYEKLMVD 243
           GP+LR++ K M+D
Sbjct: 242 GPLLRIFTKHMLD 254


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 421 QHATHRSFCQQCPFDRRSSDF 359
           +H      C+ CP   +SSD+
Sbjct: 271 KHEAGSHSCEACPAHSKSSDY 291


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,973
Number of Sequences: 438
Number of extensions: 4199
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)