Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0329
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           47   5e-07
AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    24   4.1  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    24   4.1  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 47.2 bits (107), Expect = 5e-07
 Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
 Frame = +1

Query: 25  KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISG 201
           K +V  P  T  + L GH   V  VK++   + LAS  +  +I +W  Y+G++  + I+ 
Sbjct: 47  KKNVDYPLRT-NYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVWIKYEGRWSVELIND 105

Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
               ++  +WS D R+ +    D  + V  ++  +   ++      + C  + P    + 
Sbjct: 106 RNTPVTHFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLNLDATITCGIWTPDDQQVY 165

Query: 382 SGSFDESVRIWDVRTGKCLKPLPAHSD 462
            G+    + + DV  G  +  +P  SD
Sbjct: 166 FGTTQGQIIVMDVH-GAMVSQVPLGSD 191


>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -2

Query: 641 AANIYFPFGENLTNETXGLSSSIRVLRHCPEAVSQIRHK 525
           AAN++  +       T  +S ++  L H PEA+++++ +
Sbjct: 290 AANVFLFYIAGAETSTATISFTLHELSHNPEAMAKLQQE 328


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = -2

Query: 641 AANIYFPFGENLTNETXGLSSSIRVLRHCPEAVSQIRHK 525
           AAN++  +       T  +S ++  L H PEA+++++ +
Sbjct: 290 AANVFLFYIAGAETSTATISFTLHELSHNPEAMAKLQQE 328


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.131    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,713
Number of Sequences: 2352
Number of extensions: 15864
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)