Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0329
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 308 3e-84
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 290 5e-79
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 138 4e-33
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 135 2e-32
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 135 3e-32
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 133 1e-31
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 128 3e-30
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 124 6e-29
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 123 1e-28
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 123 1e-28
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 121 5e-28
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 120 7e-28
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 120 7e-28
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 120 9e-28
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 115 3e-26
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 115 4e-26
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 114 5e-26
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 114 6e-26
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 112 3e-25
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 111 3e-25
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 105 3e-23
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 105 4e-23
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 105 4e-23
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 105 4e-23
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 103 9e-23
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 103 9e-23
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 103 9e-23
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 103 9e-23
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 103 9e-23
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 102 2e-22
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 102 3e-22
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 102 3e-22
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 101 5e-22
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 101 6e-22
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 101 6e-22
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 100 1e-21
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 100 1e-21
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 100 1e-21
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 100 2e-21
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 97 1e-20
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 96 2e-20
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 96 2e-20
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 95 3e-20
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 95 4e-20
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 94 9e-20
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 91 5e-19
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 89 2e-18
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 89 4e-18
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 86 2e-17
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 86 2e-17
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 86 2e-17
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 85 3e-17
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 85 3e-17
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 85 4e-17
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 85 4e-17
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 85 4e-17
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 85 4e-17
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 85 6e-17
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 84 1e-16
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 83 2e-16
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 83 2e-16
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 82 4e-16
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 81 7e-16
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 80 2e-15
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 80 2e-15
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 80 2e-15
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 79 2e-15
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 79 2e-15
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 79 2e-15
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 79 2e-15
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 79 3e-15
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 79 3e-15
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 79 3e-15
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 79 4e-15
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 78 5e-15
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 78 7e-15
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 77 2e-14
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 76 2e-14
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 76 2e-14
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 75 5e-14
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 75 5e-14
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 75 5e-14
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 74 8e-14
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 73 1e-13
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 73 1e-13
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 73 2e-13
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 73 2e-13
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 73 2e-13
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 72 3e-13
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 72 3e-13
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 72 4e-13
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 72 4e-13
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 71 6e-13
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 71 8e-13
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 71 8e-13
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 70 1e-12
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 70 1e-12
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 70 1e-12
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 70 1e-12
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 70 1e-12
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 70 2e-12
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 70 2e-12
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 69 2e-12
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 69 2e-12
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 68 5e-12
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 68 7e-12
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 68 7e-12
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 68 7e-12
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 68 7e-12
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 68 7e-12
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 67 9e-12
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 67 9e-12
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 67 1e-11
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 67 1e-11
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 66 2e-11
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 66 2e-11
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 66 2e-11
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 66 2e-11
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 66 2e-11
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 66 2e-11
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 66 2e-11
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 66 3e-11
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 65 4e-11
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 65 4e-11
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 65 5e-11
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 65 5e-11
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 64 7e-11
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 64 9e-11
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 64 9e-11
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 64 1e-10
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 63 2e-10
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 63 2e-10
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 63 2e-10
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 63 2e-10
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 62 3e-10
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 62 3e-10
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 62 5e-10
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 61 8e-10
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 61 8e-10
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 60 1e-09
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 60 1e-09
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 60 1e-09
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 60 1e-09
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 60 1e-09
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 60 1e-09
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 60 2e-09
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 59 2e-09
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 58 6e-09
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 58 6e-09
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 58 6e-09
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 58 8e-09
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 58 8e-09
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 57 1e-08
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 57 1e-08
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 57 1e-08
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 57 1e-08
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 57 1e-08
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 57 1e-08
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 56 2e-08
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 56 2e-08
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 56 2e-08
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 55 4e-08
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 55 4e-08
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 54 7e-08
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 54 7e-08
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 54 1e-07
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 53 2e-07
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 53 2e-07
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 53 2e-07
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 53 2e-07
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 53 2e-07
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 52 3e-07
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 52 5e-07
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 52 5e-07
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 52 5e-07
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 52 5e-07
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 51 7e-07
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 51 7e-07
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 51 9e-07
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 51 9e-07
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 50 2e-06
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 50 2e-06
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 50 2e-06
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 50 2e-06
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 48 5e-06
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 48 5e-06
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 48 5e-06
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 48 5e-06
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 48 8e-06
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 47 1e-05
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 46 2e-05
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 46 2e-05
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 46 2e-05
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 46 2e-05
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 46 2e-05
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 46 3e-05
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 46 3e-05
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 45 6e-05
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 45 6e-05
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 45 6e-05
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 45 6e-05
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 44 8e-05
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 44 1e-04
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 44 1e-04
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 44 1e-04
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 44 1e-04
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 43 2e-04
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 43 2e-04
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 43 2e-04
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 43 2e-04
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 42 3e-04
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 42 3e-04
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 42 3e-04
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 42 4e-04
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 42 4e-04
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 42 5e-04
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 41 7e-04
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 41 0.001
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 40 0.001
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 40 0.001
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 40 0.002
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 39 0.004
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 39 0.004
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 38 0.005
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 38 0.005
At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat fam... 38 0.005
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 38 0.007
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 38 0.009
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 38 0.009
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 37 0.011
At5g05150.1 68418.m00547 transport protein-related contains 2 WD... 37 0.015
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 36 0.020
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 36 0.026
At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3 ... 36 0.026
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 36 0.026
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 36 0.035
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 35 0.061
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 34 0.080
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 34 0.080
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 34 0.080
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 34 0.11
At1g03380.1 68414.m00317 expressed protein 34 0.11
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 33 0.14
At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repe... 33 0.14
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 33 0.19
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 33 0.25
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 33 0.25
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 33 0.25
At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40... 32 0.43
At5g54730.1 68418.m06815 expressed protein 31 0.99
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 31 0.99
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 30 1.3
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 30 1.3
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 30 1.3
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 29 2.3
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 29 2.3
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 29 2.3
At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repe... 29 2.3
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 29 3.0
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 3.0
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 29 3.0
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 28 5.3
At3g62770.2 68416.m07051 transport protein-related weak similari... 28 5.3
At3g62770.1 68416.m07052 transport protein-related weak similari... 28 5.3
At1g51690.2 68414.m05825 serine/threonine protein phosphatase 2A... 28 5.3
At1g51690.1 68414.m05824 serine/threonine protein phosphatase 2A... 28 5.3
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 28 5.3
At3g20620.1 68416.m02609 F-box family protein-related contains w... 28 7.0
At5g43670.1 68418.m05337 transport protein, putative similar to ... 27 9.2
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 27 9.2
At4g13290.1 68417.m02078 cytochrome P450 71A19, putative (CYP71A... 27 9.2
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 27 9.2
At1g59453.1 68414.m06679 transcription factor-related weak simil... 27 9.2
At1g59077.1 68414.m06670 hypothetical protein 27 9.2
At1g58766.1 68414.m06659 hypothetical protein 27 9.2
At1g49610.1 68414.m05562 F-box family protein contains F-box dom... 27 9.2
At1g09470.1 68414.m01059 expressed protein ; expression supporte... 27 9.2
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 308 bits (755), Expect = 3e-84
Identities = 145/218 (66%), Positives = 174/218 (79%), Gaps = 5/218 (2%)
Frame = +1
Query: 49 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTI---SGHKMG 213
Y TL H +AVSSVKFS +G LAS+SADK I+ + + + + +GH+ G
Sbjct: 14 YVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENG 73
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
ISDVA+SSD+R IVSASDDKTLK+W++ +G +KTL GH+NY FC NFNPQSN+IVSGSF
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
DE+VRIWDV TGKCLK LPAHSDPV+AV FNRDGSLIVSSSYDGLCRIWD+ +G C+KTL
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
IDD+NP VSFV+FSPNGK+IL TLDNTL+LW+ S K
Sbjct: 194 IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAK 231
Score = 147 bits (357), Expect = 5e-36
Identities = 76/213 (35%), Positives = 119/213 (55%), Gaps = 3/213 (1%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GH +S V FS + ++ S+S DK +K+W G KT+ GH V ++ S +I
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 432
VS S D+T+++W++++GKCLK L HS+ V +FN +LIVS S+D RIWD TG
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGH 188
Query: 433 CLKPL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP--XVSF 603
C+K L + PVS V F+ +G I+ + D R+W+ +S + LKT N +S
Sbjct: 189 CVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISS 248
Query: 604 VKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
NGK I++ + DN + +W+ + K + +
Sbjct: 249 AFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKL 281
Score = 97.5 bits (232), Expect = 8e-21
Identities = 58/162 (35%), Positives = 87/162 (53%), Gaps = 4/162 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKMGISDVAWSSDS 243
L H+ V++V F+ +G + SSS D L +IW + G KT I +S V +S +
Sbjct: 151 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG 210
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN--FN-PQSNLIVSGSFDESVRIW 414
+ I+ + D TL++W +SS K LKT GH N +C + F+ IVSGS D V +W
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Query: 415 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
++ + K L+ L H++ V V + +LI S S D RIW
Sbjct: 271 ELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 90.6 bits (215), Expect = 9e-19
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Frame = +1
Query: 49 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH---KMGIS 219
+ +K + VS V+FSPNG+++ + D +++W KF KT +GH + IS
Sbjct: 188 HCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCIS 247
Query: 220 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 399
++ + IVS S+D + +WEL+S K L+ L+GH+ V +P NLI SGS D+
Sbjct: 248 SAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDK 307
Query: 400 SVRIW 414
+VRIW
Sbjct: 308 TVRIW 312
Score = 79.8 bits (188), Expect = 2e-15
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 5/133 (3%)
Frame = +1
Query: 313 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-----GKCLKPLPAHSDPVSAV 477
+TL H+ V F+ L+ S S D+++R + + T + ++ H + +S V
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 478 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNT 657
F+ D IVS+S D ++WD +G +KTLI N V F+P I++ + D T
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTN-YAFCVNFNPQSNMIVSGSFDET 136
Query: 658 LKLWDYSRGKCFE 696
+++WD + GKC +
Sbjct: 137 VRIWDVTTGKCLK 149
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Frame = +1
Query: 445 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-----GQCLKTLIDDDNPXVSFVK 609
L +H+ VS+V F+ DG L+ S+S D R + + + ++ +N +S V
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHEN-GISDVA 78
Query: 610 FSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
FS + ++I++A+ D TLKLWD G + +
Sbjct: 79 FSSDARFIVSASDDKTLKLWDVETGSLIKTL 109
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 290 bits (712), Expect = 5e-79
Identities = 139/234 (59%), Positives = 173/234 (73%), Gaps = 1/234 (0%)
Frame = +1
Query: 7 SAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 186
+A S + KP LK TL GHT A+S VKFS +G LAS+S DK + +W A +
Sbjct: 20 NAGTSGNVPIYKPYRHLK-TLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLI 78
Query: 187 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNP 363
GH GISD+AWSSDS SASDD TL++W+ S +CLK L+GH+N+VFC NFNP
Sbjct: 79 HRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNP 138
Query: 364 QSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
SNLIVSGSFDE++RIW+V+TGKC++ + AHS P+S+VHFNRDGSLIVS+S+DG C+IWD
Sbjct: 139 PSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD 198
Query: 544 TASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDIY 705
G CLKTLIDD +P VSF KFSPNGK+IL ATLD+TLKL +Y+ GK F +Y
Sbjct: 199 AKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGK-FLKVY 251
Score = 134 bits (323), Expect = 7e-32
Identities = 74/213 (34%), Positives = 117/213 (54%), Gaps = 4/213 (1%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISD 222
NY+L GH+ +S + +S + + S+S D ++IW A + K + GH +
Sbjct: 74 NYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFC 133
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
V ++ S LIVS S D+T+++WE+ +GKC++ +K HS + +FN +LIVS S D S
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGS 193
Query: 403 VRIWDVRTGKCLKPLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
+IWD + G CLK L P VS F+ +G I+ ++ D ++ + A+G+ LK
Sbjct: 194 CKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTG 253
Query: 580 DDNPXVSFVK-FS-PNGKYILAATLDNTLKLWD 672
N FS NGKYI++ + DN + LWD
Sbjct: 254 HTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD 286
Score = 111 bits (267), Expect = 4e-25
Identities = 72/217 (33%), Positives = 106/217 (48%), Gaps = 6/217 (2%)
Frame = +1
Query: 37 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 216
A+ Y L GHT V V F+P + S S D+ I+IW GK + I H M I
Sbjct: 114 ARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPI 173
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSF 393
S V ++ D LIVSAS D + K+W+ G CLKTL S V F+P I+ +
Sbjct: 174 SSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATL 233
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSAVH--FN-RDGSLIVSSSYDGLCRIWDTASGQCL 564
D ++++ + TGK LK H++ V + F+ +G IVS S D +WD + L
Sbjct: 234 DSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNIL 293
Query: 565 KTLIDDDNPXVSFVKFSPNGKYILAA--TLDNTLKLW 669
+ L + +S V P I ++ LD T+++W
Sbjct: 294 QRLEGHTDAVIS-VSCHPVQNEISSSGNHLDKTIRIW 329
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 138 bits (333), Expect = 4e-33
Identities = 72/204 (35%), Positives = 114/204 (55%), Gaps = 2/204 (0%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKMGISDVAWSSDS 243
L+GH AV ++KF+P G +AS S D+ I +W + D K + GHK I D+ W+SD
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDESVRIWDV 420
IVSAS DKT++ W++ +GK +K + HS++V CC LI+SGS D + ++WD+
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM 168
Query: 421 RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVS 600
R ++ P ++AV F+ I + D ++WD G+ TL + ++
Sbjct: 169 RQRGAIQTFP-DKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL-EGHQDTIT 226
Query: 601 FVKFSPNGKYILAATLDNTLKLWD 672
+ SP+G Y+L +DN L +WD
Sbjct: 227 GMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 96.3 bits (229), Expect = 2e-20
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH A+ + ++ +G + S+S DK ++ W GK K ++ H ++ +
Sbjct: 92 LKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGP 151
Query: 247 -LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
LI+S SDD T K+W++ ++T + +F+ ++ I +G D V++WD+R
Sbjct: 152 PLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDNDVKVWDLR 210
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD----TASGQCLKTLIDDD-N 588
G+ L H D ++ + + DGS ++++ D +WD +C+K N
Sbjct: 211 KGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHN 270
Query: 589 PXVSFVK--FSPNGKYILAATLDNTLKLWD 672
+ +K +SP+G + A + D + +WD
Sbjct: 271 FEKNLLKCSWSPDGTKVTAGSSDRMVHIWD 300
Score = 95.9 bits (228), Expect = 2e-20
Identities = 54/167 (32%), Positives = 85/167 (50%), Gaps = 2/167 (1%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQS 369
+SGH + + ++ LI S S D+ + +W + K LKGH N + ++
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 108
Query: 370 NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDT 546
+ IVS S D++VR WDV TGK +K + HS V++ R G LI+S S DG ++WD
Sbjct: 109 SQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM 168
Query: 547 ASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
++T D ++ V FS I +DN +K+WD +G+
Sbjct: 169 RQRGAIQTF--PDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGE 213
Score = 74.1 bits (174), Expect = 8e-14
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
+++V FS + + + D +K+W G+ T+ GH+ I+ ++ S D +++
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 268 DKTLKVWELS----SGKCLKTLKGHS-NY---VFCCNFNPQSNLIVSGSFDESVRIWDVR 423
D L VW++ +C+K +GH N+ + C+++P + +GS D V IWD
Sbjct: 243 DNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTT 302
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYD 522
+ + + LP H+ V+ F+ +I S S D
Sbjct: 303 SRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSD 335
Score = 65.3 bits (152), Expect = 4e-11
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 9/178 (5%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
+A H+ V+S + G L S S D K+W +T K I+ V++S +
Sbjct: 134 MAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDAA 192
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
I + D +KVW+L G+ TL+GH + + + +P + +++ D + +WD+R
Sbjct: 193 DKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMR 252
Query: 424 ----TGKCLKPLPAH----SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
+C+K H + ++ DG+ + + S D + IWDT S + + L
Sbjct: 253 PYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKL 310
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGHK----MGIS 219
TL GH ++ + SP+G +L ++ D + +W A + K GH+ +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 220 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 399
+WS D + + S D+ + +W+ +S + + L GH+ V C F+P +I S S D+
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDK 336
Query: 400 SVRIWDV 420
++ + ++
Sbjct: 337 NIYLGEI 343
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 135 bits (327), Expect = 2e-32
Identities = 74/217 (34%), Positives = 122/217 (56%), Gaps = 5/217 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH+ V V S +G++ S S D +++W G+ + GH + VA+S+D+R
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL--IVSGSFDESVRI 411
IVSAS D+T+K+W + G+C T+ GH +V C F+P + + IVS S+D++V++
Sbjct: 119 QIVSASRDRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 412 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 591
W+++ K L HS ++ V + DGSL S DG+ +WD A G+ L +L +
Sbjct: 178 WNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAGS 235
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
+ + FSPN +Y L A +N++++WD ED+
Sbjct: 236 IIHSLCFSPN-RYWLCAATENSIRIWDLESKSVVEDL 271
Score = 95.5 bits (227), Expect = 3e-20
Identities = 60/222 (27%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKMGI 216
LK + HT V+++ N + + ++S DK I +W G ++ ++GH +
Sbjct: 7 LKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV 66
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
DV SSD + +S S D L++W+L++G+ + GH+ V F+ + IVS S D
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 397 ESVRIWDVRTGKC---LKPLPAHSDPVSAVHFNRDGSL--IVSSSYDGLCRIWDTASGQC 561
++++W+ G+C + H + VS V F+ + + IVS+S+D ++W+ + +
Sbjct: 127 RTIKLWNT-LGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL 185
Query: 562 LKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
+L+ ++ V SP+G + D + LWD + GK
Sbjct: 186 RNSLVGHSG-YLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 46.8 bits (106), Expect = 1e-05
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 225
N L+ +L GH+ +++V SP+G AS D +I +W +GK K S I
Sbjct: 182 NCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHS 239
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK----------------GHSNYVFCC-- 351
S +R + A+ + ++++W+L S ++ LK G+ V C
Sbjct: 240 LCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTS 299
Query: 352 -NFNPQSNLIVSGSFDESVRIWDV 420
N++ + + SG D VR+W +
Sbjct: 300 LNWSADGSTLFSGYTDGVVRVWGI 323
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 135 bits (326), Expect = 3e-32
Identities = 73/217 (33%), Positives = 122/217 (56%), Gaps = 5/217 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
+ GH+ V V S +G++ S S D +++W G+ + GH + VA+S+D+R
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL--IVSGSFDESVRI 411
IVSAS D+T+K+W + G+C T+ GH +V C F+P + + IVS S+D++V++
Sbjct: 119 QIVSASRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKV 177
Query: 412 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 591
W+++ K L HS ++ V + DGSL S DG+ +WD A G+ L +L +
Sbjct: 178 WNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAGS 235
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
+ + FSPN +Y L A +N++++WD ED+
Sbjct: 236 IIHSLCFSPN-RYWLCAATENSIRIWDLESKSVVEDL 271
Score = 100 bits (239), Expect = 1e-21
Identities = 63/222 (28%), Positives = 112/222 (50%), Gaps = 11/222 (4%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKMGI 216
LK T+ HT V+++ N + + +SS DK I +W G ++ ++GH +
Sbjct: 7 LKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV 66
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
DV SSD + +S S D L++W+L++G+ + GH+ V F+ + IVS S D
Sbjct: 67 QDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 397 ESVRIWDVRTGKC---LKPLPAHSDPVSAVHFNRDGSL--IVSSSYDGLCRIWDTASGQC 561
++++W+ G+C + H + VS V F+ + + IVS+S+D ++W+ + +
Sbjct: 127 RTIKLWNT-LGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL 185
Query: 562 LKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
TL ++ V SP+G + D + LWD + GK
Sbjct: 186 RNTLAGHSG-YLNTVAVSPDGSLCASGGKDGVILLWDLAEGK 226
Score = 51.6 bits (118), Expect = 5e-07
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 225
N L+ TLAGH+ +++V SP+G AS D +I +W +GK K S I
Sbjct: 182 NCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHS 239
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK----------------GHSNYVFCC-- 351
S +R + A+ + ++++W+L S ++ LK G+ V C
Sbjct: 240 LCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLKAEAEKTDGSTGIGNKTKVIYCTS 299
Query: 352 -NFNPQSNLIVSGSFDESVRIWDV 420
N++ N + SG D +R+W +
Sbjct: 300 LNWSADGNTLFSGYTDGVIRVWGI 323
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 133 bits (321), Expect = 1e-31
Identities = 76/218 (34%), Positives = 120/218 (55%), Gaps = 6/218 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH+ V V S +G++ S S D +++W G + GH + VA+S D+R
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 247 LIVSASDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQS--NLIVSGSFDESVR 408
IVSAS D+T+K+W + G+C T+ +GH ++V C F+P + IVS S+D++V+
Sbjct: 119 QIVSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 409 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
+W++ K L H+ VS V + DGSL S DG+ +WD A G+ L +L + N
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL--EAN 235
Query: 589 PXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
+ + FSPN +Y L A ++ +K+WD ED+
Sbjct: 236 SVIHALCFSPN-RYWLCAATEHGIKIWDLESKSIVEDL 272
Score = 100 bits (240), Expect = 8e-22
Identities = 68/224 (30%), Positives = 114/224 (50%), Gaps = 13/224 (5%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWG------AYDGKFEKTISGHKMG 213
LK T+ HT V+++ N + + S+S DK I +W AY G ++ ++GH
Sbjct: 7 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY-GVAQRRLTGHSHF 65
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
+ DV SSD + +S S D L++W+L++G + GH+ V F+ + IVS S
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR 125
Query: 394 DESVRIWDVRTGKCLKPL----PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASG 555
D ++++W+ G+C + H D VS V F N IVS+S+D ++W+ ++
Sbjct: 126 DRTIKLWNT-LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC 184
Query: 556 QCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
+ L++ + VS V SP+G + D + LWD + GK
Sbjct: 185 K-LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK 227
Score = 77.4 bits (182), Expect = 9e-15
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 21/192 (10%)
Frame = +1
Query: 28 SSVAKPNYTLKFTLAGHTKAVSSVKFSPN--GEWLASSSADKLIKIWGAYDGKFEKTISG 201
+++ + YT+ GH VS V+FSPN + S+S DK +K+W + K T++G
Sbjct: 133 NTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG 192
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
H +S VA S D L S D + +W+L+ GK L +L+ +S C F+P +
Sbjct: 193 HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALC-FSPNRYWLC 251
Query: 382 SGSFDESVRIWDVRTGKCLKPLPA----------HSDPV---------SAVHFNRDGSLI 504
+ + + ++IWD+ + ++ L +S P ++++++ DGS +
Sbjct: 252 AAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTL 310
Query: 505 VSSSYDGLCRIW 540
S DG+ R+W
Sbjct: 311 FSGYTDGVIRVW 322
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of Pol
II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 128 bits (310), Expect = 3e-30
Identities = 70/224 (31%), Positives = 117/224 (52%), Gaps = 1/224 (0%)
Frame = +1
Query: 4 QSAPQSNKSSVAKPNYTLKFTLA-GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 180
Q+ S+ S+ PN +TL GH+ V S FSP G+++ SSSAD I++W
Sbjct: 393 QAENDSSDQSIG-PNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNA 451
Query: 181 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 360
GH + D +S S S D+T ++W + + L+ + GH + V +++
Sbjct: 452 NLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWH 508
Query: 361 PQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
P N I +GS D++VR+WDV+TG+C++ H V ++ + DG + S DG +W
Sbjct: 509 PNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMW 568
Query: 541 DTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
D ++ +C+ L+ N V + +S G + + + D T+KLWD
Sbjct: 569 DLSTARCITPLM-GHNSCVWSLSYSGEGSLLASGSADCTVKLWD 611
Score = 113 bits (273), Expect = 8e-26
Identities = 51/160 (31%), Positives = 89/160 (55%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GH V +FSP G + AS S D+ +IW + + ++GH +SDV W + I
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGH---LSDVDWHPNCNYI 514
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 432
+ S DKT+++W++ +G+C++ GH + V +P + SG D ++ +WD+ T +
Sbjct: 515 ATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTAR 574
Query: 433 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
C+ PL H+ V ++ ++ +GSL+ S S D ++WD S
Sbjct: 575 CITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 614
Score = 87.0 bits (206), Expect = 1e-17
Identities = 45/164 (27%), Positives = 82/164 (50%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 378
GH + +S ++S+S D T+++W L KGH+ V+ F+P +
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 379 VSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
S S D + RIW + ++PL + +S V ++ + + I + S D R+WD +G+
Sbjct: 476 ASCSHDRTARIWSMDR---IQPLRIMAGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGE 532
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
C++ I + +S SP+G+Y+ + D T+ +WD S +C
Sbjct: 533 CVRIFIGHRSMVLSLA-MSPDGRYMASGDEDGTIMMWDLSTARC 575
Score = 78.2 bits (184), Expect = 5e-15
Identities = 61/221 (27%), Positives = 94/221 (42%)
Frame = +1
Query: 28 SSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 207
SSVA P+ + +T ++ S +G +A +D IK+W K + SG
Sbjct: 336 SSVAMPSVSF-YTFVNTHNGLNCSSISHDGSLVAGGFSDSSIKVWDM--AKIGQAGSGAL 392
Query: 208 MGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 387
+D SSD + + TL L GHS V+ F+P + ++S
Sbjct: 393 QAEND---SSDQSIGPNGRRSYTL-------------LLGHSGPVYSATFSPPGDFVLSS 436
Query: 388 SFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 567
S D ++R+W + L H+ PV F+ G S S+D RIW Q L+
Sbjct: 437 SADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLR 496
Query: 568 TLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
+ +S V + PN YI + D T++LWD G+C
Sbjct: 497 IMAGH----LSDVDWHPNCNYIATGSSDKTVRLWDVQTGEC 533
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 124 bits (299), Expect = 6e-29
Identities = 63/227 (27%), Positives = 111/227 (48%)
Frame = +1
Query: 22 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 201
N ++ KP T +L GHT AV SV F + + ++ +IK+W + K + +G
Sbjct: 41 NLWAIGKP--TSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTG 98
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
H+ S V + + S S D LK+W++ C++T KGHS + F P +V
Sbjct: 99 HRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVV 158
Query: 382 SGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 561
SG D V++WD+ GK L H P+ ++ F+ L+ + S D + WD + +
Sbjct: 159 SGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFEL 218
Query: 562 LKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
+ + + V +KF P+G+ + LD++LK++ + C + +
Sbjct: 219 IGS-TRPEATGVRSIKFHPDGRTLFCG-LDDSLKVYSWEPVVCHDGV 263
Score = 106 bits (254), Expect = 2e-23
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 1/214 (0%)
Frame = +1
Query: 34 VAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL-IKIWGAYDGKFEKTISGHKM 210
+AK Y L+ LA H+ V+ + L + D + +W ++ GH
Sbjct: 1 MAKRGYKLQEFLA-HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTS 59
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 390
+ VA+ S L+++ + +K+W++ K ++ GH + F+P + SGS
Sbjct: 60 AVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGS 119
Query: 391 FDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 570
D +++IWD+R C++ HS +S + F DG +VS D + ++WD +G+ L
Sbjct: 120 SDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHE 179
Query: 571 LIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ P + + F P + + D T+K WD
Sbjct: 180 FKFHEGP-IRSLDFHPLEFLLATGSADRTVKFWD 212
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 123 bits (297), Expect = 1e-28
Identities = 62/199 (31%), Positives = 100/199 (50%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
+ GH V SV F P+ EW + SAD+ IKIW G + T++GH + +A S+
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
+ SA DDK +K W+L K +++ GH + V+C +P +++++G D R+WD+RT
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRT 291
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV 606
+ L H + V +V +V+ S+D + WD G+ + TL V +
Sbjct: 292 KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTL-THHKKSVRAM 350
Query: 607 KFSPNGKYILAATLDNTLK 663
P +A+ DNT K
Sbjct: 351 TLHPKENAFASASADNTKK 369
Score = 90.2 bits (214), Expect = 1e-18
Identities = 49/214 (22%), Positives = 95/214 (44%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
LK TL GH + V + S ++ S+ DK +K W K ++ GH G+ +A
Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH 269
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
++++ D +VW++ + + L GH N V P +V+GS D +++ W
Sbjct: 270 PTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
Query: 415 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPX 594
D+R GK + L H V A+ + + S+S D + + G+ ++
Sbjct: 330 DLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADN-TKKFSLPKGEFCHNMLSQQKTI 388
Query: 595 VSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFE 696
++ + + +G + + ++ WD+ G F+
Sbjct: 389 INAMAVNEDGVMVTGGD-NGSIWFWDWKSGHSFQ 421
Score = 81.0 bits (191), Expect = 7e-16
Identities = 42/167 (25%), Positives = 76/167 (45%)
Frame = +1
Query: 187 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 366
+ I GH + VA+ + + S D+T+K+W++++G TL GH V + +
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 367 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 546
+ S D+ V+ WD+ K ++ H V + + ++++ D +CR+WD
Sbjct: 230 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
Query: 547 ASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
+ + L DN S V P ++ + D T+K WD GK
Sbjct: 290 RTKMQIFALSGHDNTVCS-VFTRPTDPQVVTGSHDTTIKFWDLRYGK 335
Score = 51.2 bits (117), Expect = 7e-07
Identities = 28/123 (22%), Positives = 54/123 (43%)
Frame = +1
Query: 304 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 483
K + ++GH +V F+P + +GS D +++IWDV TG L H + V +
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 484 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLK 663
+ + + S+ D + WD + +++ V + P +L D+ +
Sbjct: 227 SNRHTYMFSAGDDKQVKCWDLEQNKVIRS-YHGHLSGVYCLALHPTLDVLLTGGRDSVCR 285
Query: 664 LWD 672
+WD
Sbjct: 286 VWD 288
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuclear
ribonucleoprotein Prp4p-related similar to U4/U6 small
nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta repeat
(7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 123 bits (297), Expect = 1e-28
Identities = 70/232 (30%), Positives = 114/232 (49%), Gaps = 1/232 (0%)
Frame = +1
Query: 7 SAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 186
+A + + K + TL T GH ++ V F P+G++L ++S DK ++W G
Sbjct: 315 TASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 374
Query: 187 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 366
GH + +A+ D L S D +VW+L +G+ + +GH VF NF+P
Sbjct: 375 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN 434
Query: 367 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWD 543
+ SG D RIWD+R K L +PAH++ VS V + ++G + ++SYD IW
Sbjct: 435 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 494
Query: 544 TASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFED 699
+K+L ++ V+ + + + I + D T+KLW S G ED
Sbjct: 495 GRDFSLVKSLAGHES-KVASLDITADSSCIATVSHDRTIKLWT-SSGNDDED 544
Score = 119 bits (287), Expect = 2e-27
Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 1/202 (0%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L H + + V FSP + LA++SAD+ K+W DG +T GH ++ VA+ +
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGK 352
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
+ + S DKT ++W++++G L +GHS V+ F L S D R+WD+RT
Sbjct: 353 YLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRT 412
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV 606
G+ + H PV +V+F+ +G + S D CRIWD + L + N VS V
Sbjct: 413 GRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHAN-LVSQV 471
Query: 607 KFSPNGKYILA-ATLDNTLKLW 669
K+ P Y LA A+ D + +W
Sbjct: 472 KYEPQEGYFLATASYDMKVNIW 493
Score = 67.3 bits (157), Expect = 9e-12
Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 1/164 (0%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNPQSNL 375
G ++ ++S D +++ + S K+WE+ + LK H F+P +
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDC 312
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
+ + S D + ++W G L+ H D ++ V F+ G + ++SYD R+WD +G
Sbjct: 313 LATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
Query: 556 QCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
L L + + V + F +G + LD+ ++WD G+
Sbjct: 372 AEL-LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGR 414
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 121 bits (291), Expect = 5e-28
Identities = 63/199 (31%), Positives = 102/199 (51%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH V SV F P+ EW + SAD+ IKIW G + T++GH + +A S+
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
+ SA DDK +K W+L K +++ GH + V+C +P +++++G D R+WD+RT
Sbjct: 226 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRT 285
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV 606
+ LP SD S + D +++ S+D + WD G+ + T I + V +
Sbjct: 286 KMQIFVLPHDSDVFSVLARPTDPQ-VITGSHDSTIKFWDLRYGKSMAT-ITNHKKTVRAM 343
Query: 607 KFSPNGKYILAATLDNTLK 663
P ++A+ DN K
Sbjct: 344 ALHPKENDFVSASADNIKK 362
Score = 80.6 bits (190), Expect = 9e-16
Identities = 49/214 (22%), Positives = 94/214 (43%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
LK TL GH V + S ++ S+ DK +K W K ++ GH G+ +A
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALH 263
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
++++ D +VW++ + + L H + VF P +++GS D +++ W
Sbjct: 264 PTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQVITGSHDSTIKFW 322
Query: 415 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPX 594
D+R GK + + H V A+ + + VS+S D + + + G+ ++
Sbjct: 323 DLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNI-KKFSLPKGEFCHNMLSLQRDI 381
Query: 595 VSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFE 696
++ V + +G + L WD+ G F+
Sbjct: 382 INAVAVNEDGVMVTGGD-KGGLWFWDWKSGHNFQ 414
Score = 78.6 bits (185), Expect = 4e-15
Identities = 41/172 (23%), Positives = 78/172 (45%)
Frame = +1
Query: 187 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 366
+ + GH + VA+ + + S D+T+K+W++++G TL GH V + +
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 223
Query: 367 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 546
+ S D+ V+ WD+ K ++ H V + + ++++ D +CR+WD
Sbjct: 224 HTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDI 283
Query: 547 ASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
+ + L D + V V P ++ + D+T+K WD GK I
Sbjct: 284 RTKMQIFVLPHDSD--VFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATI 333
Score = 50.8 bits (116), Expect = 9e-07
Identities = 29/123 (23%), Positives = 53/123 (43%)
Frame = +1
Query: 304 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 483
K + L+GH +V F+P + +GS D +++IWDV TG L H V +
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Query: 484 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLK 663
+ + + S+ D + WD + +++ V + P +L D+ +
Sbjct: 221 SNRHTYMFSAGDDKQVKCWDLEQNKVIRS-YHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Query: 664 LWD 672
+WD
Sbjct: 280 VWD 282
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 120 bits (290), Expect = 7e-28
Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Frame = +1
Query: 22 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 201
N ++ KPN L +L GH+ + SV F + +A+ +A IK+W + K +T++G
Sbjct: 42 NLWAIGKPNAIL--SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTG 99
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
H+ V + S S D LK+W++ C+ T KGH+ V F P +V
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVV 159
Query: 382 SGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 561
SG D V++WD+ GK L +H + ++ F+ L+ + S D + WD + +
Sbjct: 160 SGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFEL 219
Query: 562 LKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFE--DIYW 708
+ + + V + F+P+GK +L L +LK++ + +C + D+ W
Sbjct: 220 IGS-GGPETAGVRCLSFNPDGKTVLCG-LQESLKIFSWEPIRCHDGVDVGW 268
Score = 113 bits (271), Expect = 1e-25
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Frame = +1
Query: 40 KPNYTLKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 216
K Y L+ +A H+ AV+ +K + L + D + +W ++ GH GI
Sbjct: 4 KRAYKLQEFVA-HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI 62
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
V + + L+ + + T+K+W+L K ++TL GH + +F+P SGS D
Sbjct: 63 DSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 576
+++IWD+R C+ H+ V+ + F DG +VS D + ++WD +G+ L T
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL-TEF 181
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ + F P+ + + D T+K WD
Sbjct: 182 KSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 120 bits (290), Expect = 7e-28
Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Frame = +1
Query: 22 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 201
N ++ KPN L +L GH+ + SV F + +A+ +A IK+W + K +T++G
Sbjct: 42 NLWAIGKPNAIL--SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTG 99
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
H+ V + S S D LK+W++ C+ T KGH+ V F P +V
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVV 159
Query: 382 SGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 561
SG D V++WD+ GK L +H + ++ F+ L+ + S D + WD + +
Sbjct: 160 SGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFEL 219
Query: 562 LKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFE--DIYW 708
+ + + V + F+P+GK +L L +LK++ + +C + D+ W
Sbjct: 220 IGS-GGPETAGVRCLSFNPDGKTVLCG-LQESLKIFSWEPIRCHDGVDVGW 268
Score = 113 bits (271), Expect = 1e-25
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 1/212 (0%)
Frame = +1
Query: 40 KPNYTLKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 216
K Y L+ +A H+ AV+ +K + L + D + +W ++ GH GI
Sbjct: 4 KRAYKLQEFVA-HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI 62
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
V + + L+ + + T+K+W+L K ++TL GH + +F+P SGS D
Sbjct: 63 DSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 576
+++IWD+R C+ H+ V+ + F DG +VS D + ++WD +G+ L T
Sbjct: 123 TNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL-TEF 181
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ + F P+ + + D T+K WD
Sbjct: 182 KSHEGQIQSLDFHPHEFLLATGSADRTVKFWD 213
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 120 bits (289), Expect = 9e-28
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Frame = +1
Query: 22 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 201
N ++ KPN L +L GH+ + SV F + +A+ +A IK+W + K +T++G
Sbjct: 135 NLWAIGKPNAIL--SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTG 192
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
H+ V + S S D LK+W++ C+ T KGH+ V F P IV
Sbjct: 193 HRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIV 252
Query: 382 SGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 561
SG D V++WD+ GK L +H + ++ F+ L+ + S D + WD + +
Sbjct: 253 SGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFEL 312
Query: 562 LKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFE--DIYW 708
+ + + V + F+P+GK +L L +LK++ + +C + D+ W
Sbjct: 313 IGS-GGTETTGVRCLTFNPDGKSVLCG-LQESLKIFSWEPIRCHDGVDVGW 361
Score = 113 bits (273), Expect = 8e-26
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 1/200 (0%)
Frame = +1
Query: 76 HTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
H+ AV+ +K + L + D + +W ++ GH GI V + + L+
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 167
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 432
+ + T+K+W+L K ++TL GH + NF+P SGS D +++IWD+R
Sbjct: 168 AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKG 227
Query: 433 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKF 612
C+ H+ V+ + F DG IVS D + ++WD +G+ L + + + F
Sbjct: 228 CIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEG-KIQSLDF 286
Query: 613 SPNGKYILAATLDNTLKLWD 672
P+ + + D T+K WD
Sbjct: 287 HPHEFLLATGSADKTVKFWD 306
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 115 bits (277), Expect = 3e-26
Identities = 57/213 (26%), Positives = 103/213 (48%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
+L GHT V SV F+ + + ++ +IK+W + K + +GH+ S V +
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
+ S S D L+VW+ C++T KGH+ + F+P +VSG D V++WD+
Sbjct: 62 EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLT 121
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSF 603
GK L H P+ ++ F+ L+ + S D + WD + + + T + V
Sbjct: 122 AGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGT-TRPEATGVRA 180
Query: 604 VKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
+ F P+G+ + LD+ LK++ + C + +
Sbjct: 181 IAFHPDGQTLFCG-LDDGLKVYSWEPVICRDGV 212
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 115 bits (276), Expect = 4e-26
Identities = 58/182 (31%), Positives = 100/182 (54%), Gaps = 8/182 (4%)
Frame = +1
Query: 49 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--------H 204
+T+KF H + +FSP+G++LASSS D I++W GK +K + H
Sbjct: 206 HTIKFGKKSHAECA---RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMH 262
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 384
+ + +S DS ++ S S D +K+W + +G C++ HS V +F+ + ++S
Sbjct: 263 DDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLS 322
Query: 385 GSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 564
SFD++ RI +++GK LK H+ V+ F DGS I+++S D ++WD+ + CL
Sbjct: 323 TSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCL 382
Query: 565 KT 570
+T
Sbjct: 383 QT 384
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
H++ V+S+ FS +G L S+S D+ +I G GK K GH ++ ++SD I+
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 256 SASDDKTLKVWELSSGKCLKTLK 324
+AS D T+KVW+ + CL+T K
Sbjct: 364 TASSDCTVKVWDSKTTDCLQTFK 386
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Frame = +1
Query: 481 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTL---IDD-----DNPXVSFVKFSPNGKYIL 636
F+ DG + SSS DG +WD SG+ K L D+ D+P V + FS + + +
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDP-VLCIDFSRDSEMLA 279
Query: 637 AATLDNTLKLWDYSRGKC 690
+ + D +K+W G C
Sbjct: 280 SGSQDGKIKIWRIRTGVC 297
Score = 36.7 bits (81), Expect = 0.015
Identities = 11/34 (32%), Positives = 26/34 (76%)
Frame = +1
Query: 607 KFSPNGKYILAATLDNTLKLWDYSRGKCFEDIYW 708
+FSP+G+++ ++++D +++WDY GK +D+ +
Sbjct: 220 RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQY 253
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +1
Query: 106 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKV 285
S G+W+ DK + + G E + H+ + + L+ + S+D T+K+
Sbjct: 449 STKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDCTMKL 508
Query: 286 WE 291
W+
Sbjct: 509 WK 510
Score = 29.1 bits (62), Expect = 3.0
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW--SS 237
L G +V+S+ P N E + + I I + SG++ G VA S+
Sbjct: 391 LRGTDASVNSIHLFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGNREGGDFVAACVST 450
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
I +DK L + SG + H V +P NL+ + S D ++++W
Sbjct: 451 KGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDCTMKLW 509
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 114 bits (275), Expect = 5e-26
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 4/209 (1%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVA 228
L T +GHTK VS+++F P G L S+ D +KIW Y+ GK +T GH + D+
Sbjct: 274 LVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDIC 333
Query: 229 WSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCN-FNPQSNLIVSGSFDES 402
+S+D ++A DK +K W+ +G+ + T G YV N + + N++++G D+
Sbjct: 334 FSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 393
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 582
+ WD+ TG+ + H V+ + F + V+SS D R+W+ +K + +
Sbjct: 394 IVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEP 453
Query: 583 DNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ + PNG ++ A +LDN + ++
Sbjct: 454 HMHSMPSISVHPNGNWLAAQSLDNQILIY 482
Score = 72.1 bits (169), Expect = 3e-13
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 9/222 (4%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T GH KAV + FS +G ++ DK IK W G+ T S K+ D
Sbjct: 321 TYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDD 380
Query: 244 R--LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
+ ++++ DK + W++++G+ + H V F + V+ S D+S+R+W+
Sbjct: 381 KQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE 440
Query: 418 VRTGKCLKPLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG-QCLKTLIDDD 585
+K + HS P +VH N G+ + + S D I+ T Q K
Sbjct: 441 FGIPVVIKYISEPHMHSMPSISVHPN--GNWLAAQSLDNQILIYSTRERFQLNKKKRFAG 498
Query: 586 NPXVSF---VKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
+ + V FSP+G+++++ + WD+ K F +
Sbjct: 499 HIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTL 540
Score = 65.7 bits (153), Expect = 3e-11
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 9/201 (4%)
Frame = +1
Query: 97 VKFSPNGEW---LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
VK +P+ + L + +DK I W G+ + H ++ + + ++R V++SD
Sbjct: 373 VKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSD 432
Query: 268 DKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKP 444
DK+L+VWE +K + + H + + + +P N + + S D + I+ R L
Sbjct: 433 DKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNK 492
Query: 445 LPAHSDPVSA-----VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVK 609
+ + A V+F+ DG ++S +G C WD S + +TL + +
Sbjct: 493 KKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEW 552
Query: 610 FSPNGKYILAATLDNTLKLWD 672
+ D +K WD
Sbjct: 553 HPLEQSKVATCGWDGLIKYWD 573
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 114 bits (274), Expect = 6e-26
Identities = 48/119 (40%), Positives = 76/119 (63%)
Frame = +1
Query: 58 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 237
K L GH + V+ V FSP+G+W+AS+S DK +++W G+F GH + V+WS+
Sbjct: 353 KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA 412
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
DSRL++S S D TLK+WE+ + K + L GH++ VF +++P +VSG D +++W
Sbjct: 413 DSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 99.1 bits (236), Expect = 2e-21
Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 6/176 (3%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T+AGH +AV V FSP+G+ LAS S D +++W Y T GHK + VAWS D
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDG 163
Query: 244 RLIVSASDDKTLKVWELSSGKCL-KTLKGHSNYVFCCNFNP-----QSNLIVSGSFDESV 405
+ +VS S + W G+ L GH ++ ++ P V+ S D
Sbjct: 164 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDA 223
Query: 406 RIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
RIWD+ K + L H+ V+ V + DG +I + S D ++W+T G+ ++ L
Sbjct: 224 RIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIREL 278
Score = 97.5 bits (232), Expect = 8e-21
Identities = 48/142 (33%), Positives = 85/142 (59%), Gaps = 1/142 (0%)
Frame = +1
Query: 118 EWLASSSADKLIKIWGAYDGKF-EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 294
E L S S D + +W K +K ++GH+ ++ V +S D + I SAS DK++++W
Sbjct: 330 ERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNG 389
Query: 295 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSA 474
+G+ + +GH V+ +++ S L++SGS D +++IW++RT K + LP H+D V A
Sbjct: 390 ITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFA 449
Query: 475 VHFNRDGSLIVSSSYDGLCRIW 540
V ++ DG +VS D + ++W
Sbjct: 450 VDWSPDGEKVVSGGKDRVLKLW 471
Score = 87.4 bits (207), Expect = 8e-18
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = +1
Query: 250 IVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
+VS SDD T+ +WE S K K L GH V F+P I S SFD+SVR+W+ T
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV 606
G+ + H PV V ++ D L++S S D +IW+ + + LK + V V
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKK-LKQDLPGHADEVFAV 450
Query: 607 KFSPNGKYILAATLDNTLKLW 669
+SP+G+ +++ D LKLW
Sbjct: 451 DWSPDGEKVVSGGKDRVLKLW 471
Score = 85.8 bits (203), Expect = 2e-17
Identities = 52/178 (29%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Frame = +1
Query: 187 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 366
+TI+GH + V++S D + + S S D T+++W+L + L T KGH N+V ++P
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 367 SNLIVSGSFDESVRIWDVRTGKCL-KPLPAHSDPVSA-----VHFNRDGSLIVSSSYDGL 528
+VSGS + W+ + G+ PL H ++ VH + V+SS DG
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGD 222
Query: 529 CRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
RIWD + + + V+ VK+ +G I + D T+K+W+ ++GK ++
Sbjct: 223 ARIWDITLKKSI-ICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIREL 278
Score = 84.2 bits (199), Expect = 8e-17
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 1/213 (0%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L+GHT AV+ VK+ +G + + S D IK+W GK + + GH I+ +A S++
Sbjct: 237 LSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYV 295
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
L A D T + + + K K Y +P+ +VSGS D ++ +W+
Sbjct: 296 LRTGAFDH-TGRQYPPNEEK----QKALERYNKTKGDSPER--LVSGSDDFTMFLWEPSV 348
Query: 427 GKCLKP-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSF 603
K K L H V+ V+F+ DG I S+S+D R+W+ +GQ + P V
Sbjct: 349 SKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGP-VYQ 407
Query: 604 VKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
V +S + + +L+ + D+TLK+W+ K +D+
Sbjct: 408 VSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDL 440
Score = 81.0 bits (191), Expect = 7e-16
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNG-----EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 231
L GH K ++ + + P +SS D +IW K +SGH + ++ V W
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKW 249
Query: 232 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
D +I + S D T+K+WE + GK ++ LKGH +++ + + ++ +G+FD + R
Sbjct: 250 GGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEY-VLRTGAFDHTGRQ 307
Query: 412 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 591
+ K K L ++ +VS S D +W+ + + K +
Sbjct: 308 YPPNEEK-QKALERYNKTKGD-----SPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQ 361
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
V+ V FSP+GK+I +A+ D +++LW+ G+
Sbjct: 362 LVNHVYFSPDGKWIASASFDKSVRLWNGITGQ 393
Score = 78.2 bits (184), Expect = 5e-15
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAW-- 231
FT GH V +V +SP+G+ L S S I W G+ E ++GHK I+ ++W
Sbjct: 145 FTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEP 204
Query: 232 ---SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
SS R V++S D ++W+++ K + L GH+ V C + +I +GS D +
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWG-GDGIIYTGSQDCT 263
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAV 477
+++W+ GK ++ L H ++++
Sbjct: 264 IKMWETTQGKLIRELKGHGHWINSL 288
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Frame = +1
Query: 304 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 483
+C +T+ GH+ V C +F+P + SGS D +VR+WD+ T L H + V V +
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAW 159
Query: 484 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSP-----NGKYILAATL 648
+ DG +VS S G W+ G+ + + ++ + + P + + ++
Sbjct: 160 SPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSK 219
Query: 649 DNTLKLWDYSRGK 687
D ++WD + K
Sbjct: 220 DGDARIWDITLKK 232
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GH V V +S + L S S D +KIW K ++ + GH + V WS D +
Sbjct: 400 GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKV 459
Query: 253 VSASDDKTLKVWE 291
VS D+ LK+W+
Sbjct: 460 VSGGKDRVLKLWK 472
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 162
LK L GH V +V +SP+GE + S D+++K+W
Sbjct: 436 LKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 112 bits (269), Expect = 3e-25
Identities = 61/212 (28%), Positives = 109/212 (51%), Gaps = 2/212 (0%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH AV + +F+ +G + + D+ I++W + G KT H + DV +SD+
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
S D+ + W++S+G+ ++ +GH V FN S+++VS FD S+R+WD R+
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRS 133
Query: 427 GKC--LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVS 600
++ + D V +V + + I+ S DG R +D G + + D+ V+
Sbjct: 134 HSVEPVQIIDTFLDTVMSVVLTK--TEIIGGSVDGTVRTFDMRIG---REMSDNLGQPVN 188
Query: 601 FVKFSPNGKYILAATLDNTLKLWDYSRGKCFE 696
+ S +G +LA LD+TL+L D + G+ +
Sbjct: 189 CISISNDGNCVLAGCLDSTLRLLDRTTGELLQ 220
Score = 62.9 bits (146), Expect = 2e-10
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 2/170 (1%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T H + V V + + S D+ + W G+ + GH ++ V ++ S
Sbjct: 55 TYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSS 114
Query: 244 RLIVSASDDKTLKVWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
++VSA D++L+VW+ S ++ + + V I+ GS D +VR +D
Sbjct: 115 SVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE--IIGGSVDGTVRTFD 172
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 567
+R G+ + PV+ + + DG+ +++ D R+ D +G+ L+
Sbjct: 173 MRIGREMS--DNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQ 220
Score = 60.9 bits (141), Expect = 8e-10
Identities = 32/112 (28%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVF---CCNFNPQSNLIVS 384
++ ++ S+D +++ D TL++ + ++G+ L+ KGH + F CC N ++ ++
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAH-VIG 245
Query: 385 GSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
GS D V WD+ K L AH V++V ++ +++SS DG R+W
Sbjct: 246 GSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 47.6 bits (108), Expect = 8e-06
Identities = 22/111 (19%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KMGISDVAWSSDSRLIVSA 261
V+ + S +G + + D +++ G+ + GH K +D ++ ++
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGG 246
Query: 262 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
S+D + W+L K L + H V +++P+ + +++ S D ++R+W
Sbjct: 247 SEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 111 bits (268), Expect = 3e-25
Identities = 67/208 (32%), Positives = 109/208 (52%), Gaps = 6/208 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH +VS + FS +G+ LAS D +++I+ A G + + G GI V W
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGH 168
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
++++ S+D +L +W L GH+ V C +F P LI +GS D S+ +W+ +T
Sbjct: 169 IVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKT 228
Query: 427 GKCL---KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXV 597
+ + K P H++ ++ + N + SL +S S DG I + +G+ + +L + V
Sbjct: 229 CESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSL-NSHTDSV 287
Query: 598 SFVKFSPNGKYI-LAAT--LDNTLKLWD 672
VKFSP+ I LAAT +D L +WD
Sbjct: 288 ECVKFSPSSATIPLAATGGMDKKLIIWD 315
Score = 100 bits (239), Expect = 1e-21
Identities = 61/219 (27%), Positives = 105/219 (47%), Gaps = 6/219 (2%)
Frame = +1
Query: 52 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 231
TLK L G + V++ P G + + S D + +W A + SGH + ++ +
Sbjct: 146 TLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDF 205
Query: 232 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY---VFCCNFNPQSNLIVSGSFDES 402
+ D +LI + SDD +L VW + + + +KGH + + C + N S+L +SGS D S
Sbjct: 206 TPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGS 265
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR---IWDTASGQCLKTL 573
V I ++ TGK + L +H+D V V F+ + I ++ G+ + IWD
Sbjct: 266 VHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQ--HSTPRF 323
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
I + V+ + + KY+ + T+ +WD G C
Sbjct: 324 ICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNC 362
Score = 83.8 bits (198), Expect = 1e-16
Identities = 50/209 (23%), Positives = 104/209 (49%), Gaps = 6/209 (2%)
Frame = +1
Query: 70 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM---GISDVAWSSD 240
+GH V+ F+P+G+ + + S D + +W + + GH G++ + +S+
Sbjct: 194 SGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSN 253
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI---VSGSFDESVRI 411
S L +S S D ++ + + +GK + +L H++ V C F+P S I +G D+ + I
Sbjct: 254 SSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLII 313
Query: 412 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 591
WD++ + + H + V+++ + + + +G IWD+ G C+ T
Sbjct: 314 WDLQHSTP-RFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHT-YHGHQD 371
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWDYS 678
V + S N +I++ ++DNT ++++ S
Sbjct: 372 AVQAISVSTNTDFIVSVSVDNTARVFESS 400
Score = 78.2 bits (184), Expect = 5e-15
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)
Frame = +1
Query: 316 TLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 492
T GH ++ +P + L+ +G D+ +W + G LP H D VS + F+ D
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 493 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
G L+ S DG+ +I+D +SG LK ++D + +V++ P G +LA + D +L +W+
Sbjct: 125 GQLLASGGLDGVVQIFDASSG-TLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWN 183
Score = 70.9 bits (166), Expect = 8e-13
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 240
T GH + ++ SP L A+ D +W +G + + GHK +S +A+S D
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
+L+ S D +++++ SSG L G + ++P+ +++++GS D S+ +W+
Sbjct: 125 GQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNA 184
Query: 421 RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
L H+ V+ F DG LI + S D +W+
Sbjct: 185 DKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWN 225
Score = 64.5 bits (150), Expect = 7e-11
Identities = 33/121 (27%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWL---ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
+L HT +V VKFSP+ + A+ DK + IW + I H+ G++ + W
Sbjct: 279 SLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHST-PRFICEHEEGVTSLTWI 337
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
S+ + + + T+ +W+ G C+ T GH + V + + ++ IVS S D + R++
Sbjct: 338 GTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVF 397
Query: 415 D 417
+
Sbjct: 398 E 398
Score = 62.5 bits (145), Expect = 3e-10
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 3/164 (1%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
HT+ ++ + + N S S D + I GK +++ H + V +S S I
Sbjct: 241 HTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIP 300
Query: 256 SASD---DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
A+ DK L +W+L + + H V + S + +G + +V IWD
Sbjct: 301 LAATGGMDKKLIIWDLQHSTP-RFICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLL 359
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
G C+ H D V A+ + + IVS S D R+++++ Q
Sbjct: 360 GNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFESSEFQ 403
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 105 bits (252), Expect = 3e-23
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 4/195 (2%)
Frame = +1
Query: 112 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVW 288
N +A++S++ L +W G+ T++GH + V S SR +VSA+ D+T+K+W
Sbjct: 285 NKSVIAATSSNNLF-VWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLW 343
Query: 289 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPV 468
+L G C T+ SN C + + SG D ++R+WD++TGK L + HS V
Sbjct: 344 DLHKGYCTNTVLFTSNCNAIC-LSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAV 402
Query: 469 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVK---FSPNGKYILA 639
++V +R+G+ I++S D + ++DT + + TL N S SP+ Y+ A
Sbjct: 403 TSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAA 462
Query: 640 ATLDNTLKLWDYSRG 684
+ D ++ +W S+G
Sbjct: 463 GSADGSVHVWSLSKG 477
Score = 104 bits (249), Expect = 7e-23
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 1/200 (0%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
H S+ F N L + D+ +K+W G K++ G I D+A + D++ ++
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVI 289
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGK 432
+A+ L VW++SSG+ TL GH++ V + + S +VS ++D ++++WD+ G
Sbjct: 290 AATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGY 349
Query: 433 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKF 612
C + S+ +A+ + DG + S DG R+WD +G+ L + + V+ V
Sbjct: 350 CTNTVLFTSN-CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSE-VAGHSSAVTSVSL 407
Query: 613 SPNGKYILAATLDNTLKLWD 672
S NG IL + DN ++D
Sbjct: 408 SRNGNRILTSGRDNVHNVFD 427
Score = 89.0 bits (211), Expect = 3e-18
Identities = 42/171 (24%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 372
I H+ G + + +S + + D+ +K+W+ +SG +K+L G + +
Sbjct: 227 IHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNK 286
Query: 373 LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTA 549
+++ + ++ +WDV +G+ L H+D V AV ++ S +VS++YD ++WD
Sbjct: 287 SVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLH 346
Query: 550 SGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
G C T++ N + + S +G + + +D L+LWD GK ++
Sbjct: 347 KGYCTNTVLFTSN--CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEV 395
Score = 56.8 bits (131), Expect = 1e-08
Identities = 34/159 (21%), Positives = 71/159 (44%), Gaps = 5/159 (3%)
Frame = +1
Query: 79 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 258
T +++ S +G + S D +++W GK ++GH ++ V+ S + I++
Sbjct: 357 TSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILT 416
Query: 259 ASDDKTLKVWELSSGKCLKTLKGH-----SNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
+ D V++ + + TL+ SN+ C +P + + +GS D SV +W +
Sbjct: 417 SGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSC-ISPDDDYVAAGSADGSVHVWSLS 475
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
G + L + P+ ++ G + S+ +G W
Sbjct: 476 KGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCTW 514
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKMGI--SDVAWS 234
+AGH+ AV+SV S NG + +S D + ++ + T+ SG+++ S S
Sbjct: 395 VAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCIS 454
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
D + + S D ++ VW LS G + LK ++ + CC+++ + S + V W
Sbjct: 455 PDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCTW 514
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/85 (27%), Positives = 38/85 (44%)
Frame = +1
Query: 433 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKF 612
C + AH ++ F + + + D ++WDT SG +K+L +
Sbjct: 223 CANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVT 282
Query: 613 SPNGKYILAATLDNTLKLWDYSRGK 687
N K ++AAT N L +WD S G+
Sbjct: 283 HDN-KSVIAATSSNNLFVWDVSSGR 306
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 105 bits (251), Expect = 4e-23
Identities = 50/165 (30%), Positives = 84/165 (50%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 225
N + +A H K ++SV + N + + S D+ IW D T+ GHK I V
Sbjct: 488 NLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSV 547
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 405
+S+ + +++AS DKT+K+W +S G CLKT +GH++ V +F VS D +
Sbjct: 548 EFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLL 607
Query: 406 RIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
++W+V T +C+ H D V A+ + +I + D + +W
Sbjct: 608 KLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 102 bits (244), Expect = 3e-22
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 12/221 (5%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDG-----------KFEKTISGHKMGI 216
GH + +V F+ + S S D+ +K+W + DG K ++ H I
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVW-SLDGISEDSEEPINLKTRSVVAAHDKDI 502
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
+ VA + + L+ + S+D+T +W L + TLKGH +F F+ +++ S D
Sbjct: 503 NSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGD 562
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 576
++V+IW + G CLK H+ V F DG+ VS DGL ++W+ + +C+ T
Sbjct: 563 KTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIAT-Y 621
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFED 699
D V + + I D + LW S ED
Sbjct: 622 DQHEDKVWALAVGKKTEMIATGGGDAVINLWHDSTASDKED 662
Score = 95.9 bits (228), Expect = 2e-20
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Frame = +1
Query: 106 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKV 285
S +G ++A + D +I I + D + TI G ++ +A S D +L+ SA + ++V
Sbjct: 28 SSDGSFIACACGD-VINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRV 86
Query: 286 WELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDP 465
W+L + KC+++ KGH V + L+ + D V +WDV G C H
Sbjct: 87 WDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGV 146
Query: 466 VSAVHFNRDG--SLIVSSSYDGLCRIWD----TASGQCLKTLIDDDNPXVSFVKFSPNGK 627
VS++ F+ D ++++S S D R+WD +CL +++ V+ + S +G
Sbjct: 147 VSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCL-AIMEKHFSAVTSIALSEDGL 205
Query: 628 YILAATLDNTLKLWDYSRGKC 690
+ +A D + LWD C
Sbjct: 206 TLFSAGRDKVVNLWDLHDYSC 226
Score = 95.1 bits (226), Expect = 4e-20
Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Frame = +1
Query: 52 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 231
++K T+ G + ++++ SP+ + L S+ + I++W K ++ GH+ + +A
Sbjct: 51 SVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMAC 110
Query: 232 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS--NLIVSGSFDESV 405
+ L+ +A D+ + VW++ G C +GH V F+P S N+++SGS D +V
Sbjct: 111 HASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATV 170
Query: 406 RIWDVRT----GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
R+WD+ KCL + H V+++ + DG + S+ D + +WD C T+
Sbjct: 171 RVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATV 230
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/124 (29%), Positives = 63/124 (50%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISD 222
P+ TL GH + + SV+FS + + ++S DK +KIW DG KT GH +
Sbjct: 529 PDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLR 588
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
++ +D VS D LK+W +++ +C+ T H + V+ ++ +I +G D
Sbjct: 589 ASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAV 648
Query: 403 VRIW 414
+ +W
Sbjct: 649 INLW 652
Score = 79.0 bits (186), Expect = 3e-15
Identities = 59/237 (24%), Positives = 111/237 (46%), Gaps = 15/237 (6%)
Frame = +1
Query: 31 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK 207
+V + L L G+ + ++ +KF + E +LA ++ + ++++ ++GHK
Sbjct: 342 NVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHK 401
Query: 208 ---MGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 375
+ + SS + LIV+ S DKT+++W +S C+ GH+ + F +S +
Sbjct: 402 EVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSF 461
Query: 376 IVSGSFDESVRIWDVR----------TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
VSGS D ++++W + K + AH +++V R+ SL+ + S D
Sbjct: 462 FVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDR 521
Query: 526 LCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFE 696
IW + TL S V+FS + ++ A+ D T+K+W S G C +
Sbjct: 522 TASIWRLPDLVHVVTLKGHKRRIFS-VEFSTVDQCVMTASGDKTVKIWAISDGSCLK 577
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T GHT +V F +G S AD L+K+W + T H+ + +A +
Sbjct: 578 TFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKT 637
Query: 244 RLIVSASDDKTLKVWELSS 300
+I + D + +W S+
Sbjct: 638 EMIATGGGDAVINLWHDST 656
Score = 35.5 bits (78), Expect = 0.035
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM--GISDVAWSSDSRL 249
H AV+S+ S +G L S+ DK++ +W +D + T++ +++ ++ V+ +
Sbjct: 191 HFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFAS 250
Query: 250 IVSASDDKTLKVWELSS 300
V++ D K K E S
Sbjct: 251 FVASLDQKKSKKKESDS 267
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 105 bits (251), Expect = 4e-23
Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Frame = +1
Query: 40 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKM 210
+P+ + TL GH+K V+SVKF + + + ++SADK ++IW DG + T++ H
Sbjct: 251 RPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSA 310
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV--FCCNFNPQSNLIVS 384
+ V ++ VSAS D T ++LSSG CL + S V F+P ++ +
Sbjct: 311 EVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGT 370
Query: 385 GSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 564
G+ V+IWDV++ + H+ V+A+ F+ +G + +++ DG+ R+WD +
Sbjct: 371 GTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV-RLWDLRKLRNF 429
Query: 565 KTLIDDDNPXVSFVKFSPNGKYILAATLD 651
K+ + D + V+F P+G Y+ A D
Sbjct: 430 KSFLSAD---ANSVEFDPSGSYLGIAASD 455
Score = 89.0 bits (211), Expect = 3e-18
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL--- 294
+A+ D ++ G+ T++GH ++ V + DS L+++AS DKT+++W
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 295 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPV-- 468
+ C TL HS V +P + VS S D + +D+ +G CL + S V
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY 356
Query: 469 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATL 648
+A F+ DG ++ + + + +IWD S Q D V+ + FS NG Y LA
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKS-QANVAKFDGHTGEVTAISFSENG-YFLATAA 414
Query: 649 DNTLKLWDYSRGKCFE 696
++ ++LWD + + F+
Sbjct: 415 EDGVRLWDLRKLRNFK 430
Score = 79.0 bits (186), Expect = 3e-15
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
+K GI + +I + D T +++ SG+ L TL GHS V F S+L++
Sbjct: 221 NKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVL 280
Query: 382 SGSFDESVRIW-DVRTGK--CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
+ S D++VRIW + G C L HS V AV + VS+S DG +D +S
Sbjct: 281 TASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSS 340
Query: 553 GQCLKTLIDDD-NPXVSFVKFSPNGKYILAATLDNTLKLWD 672
G CL + DD N + F P+G + T + +K+WD
Sbjct: 341 GSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWD 381
Score = 62.5 bits (145), Expect = 3e-10
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Frame = +1
Query: 370 NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW-DT 546
++I +G D + ++D +G+ L L HS V++V F D L++++S D RIW +
Sbjct: 235 DVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNP 294
Query: 547 ASGQ--CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
G C TL +D + V V P KY ++A+LD T +D S G C +
Sbjct: 295 GDGNYACGYTL-NDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQV 347
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 105 bits (251), Expect = 4e-23
Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 5/209 (2%)
Frame = +1
Query: 40 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKM 210
+P+ + TL GH+K V+SVKF + + + ++SADK ++IW DG + T++ H
Sbjct: 251 RPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSA 310
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV--FCCNFNPQSNLIVS 384
+ V ++ VSAS D T ++LSSG CL + S V F+P ++ +
Sbjct: 311 EVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGT 370
Query: 385 GSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 564
G+ V+IWDV++ + H+ V+A+ F+ +G + +++ DG+ R+WD +
Sbjct: 371 GTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV-RLWDLRKLRNF 429
Query: 565 KTLIDDDNPXVSFVKFSPNGKYILAATLD 651
K+ + D + V+F P+G Y+ A D
Sbjct: 430 KSFLSAD---ANSVEFDPSGSYLGIAASD 455
Score = 89.0 bits (211), Expect = 3e-18
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL--- 294
+A+ D ++ G+ T++GH ++ V + DS L+++AS DKT+++W
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 295 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPV-- 468
+ C TL HS V +P + VS S D + +D+ +G CL + S V
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY 356
Query: 469 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATL 648
+A F+ DG ++ + + + +IWD S Q D V+ + FS NG Y LA
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKS-QANVAKFDGHTGEVTAISFSENG-YFLATAA 414
Query: 649 DNTLKLWDYSRGKCFE 696
++ ++LWD + + F+
Sbjct: 415 EDGVRLWDLRKLRNFK 430
Score = 79.0 bits (186), Expect = 3e-15
Identities = 52/161 (32%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
+K GI + +I + D T +++ SG+ L TL GHS V F S+L++
Sbjct: 221 NKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVL 280
Query: 382 SGSFDESVRIW-DVRTGK--CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
+ S D++VRIW + G C L HS V AV + VS+S DG +D +S
Sbjct: 281 TASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSS 340
Query: 553 GQCLKTLIDDD-NPXVSFVKFSPNGKYILAATLDNTLKLWD 672
G CL + DD N + F P+G + T + +K+WD
Sbjct: 341 GSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWD 381
Score = 62.5 bits (145), Expect = 3e-10
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Frame = +1
Query: 370 NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW-DT 546
++I +G D + ++D +G+ L L HS V++V F D L++++S D RIW +
Sbjct: 235 DVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNP 294
Query: 547 ASGQ--CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
G C TL +D + V V P KY ++A+LD T +D S G C +
Sbjct: 295 GDGNYACGYTL-NDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQV 347
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 103 bits (248), Expect = 9e-23
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAW-SSDSRL 249
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + + L
Sbjct: 549 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 608
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-RT 426
+ S + ++ W++++ C++ +KG S V F P++ ++ + + +V I+D+
Sbjct: 609 LCSCDSNNDIRFWDINA-SCVRAVKGASTQV---RFQPRTGQFLAAASENTVSIFDIENN 664
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV 606
K + HS V +V ++ +G L+ S S D + ++W +SG C+ L + N S V
Sbjct: 665 NKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDCIHELSNSGNKFHSVV 723
Query: 607 KFSPNGKYILAATLDNTLKLWDYSRGKC 690
F P+ +L ++LW+ KC
Sbjct: 724 -FHPSYPDLLVIGGYQAIELWNTMENKC 750
Score = 93.5 bits (222), Expect = 1e-19
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 3/203 (1%)
Frame = +1
Query: 103 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 282
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S DKT+K
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 575
Query: 283 VWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPLPAH 456
+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R WD+ C++ +
Sbjct: 576 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGA 634
Query: 457 SDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYI 633
S + V F R G + ++S + I+D + + + V V +SPNG+ +
Sbjct: 635 S---TQVRFQPRTGQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-L 689
Query: 634 LAATLDNTLKLWDYSRGKCFEDI 702
+A+ ++ +KLW S G C ++
Sbjct: 690 VASVSEDAVKLWSLSSGDCIHEL 712
Score = 72.9 bits (171), Expect = 2e-13
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 405
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 515 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 574
Query: 406 RIWDVR-TGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
+IWD G L+ + H+ PV ++ F+ + L+ S + R WD + C++ +
Sbjct: 575 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD-INASCVRAV-- 631
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ V+F P LAA +NT+ ++D
Sbjct: 632 --KGASTQVRFQPRTGQFLAAASENTVSIFD 660
Score = 72.9 bits (171), Expect = 2e-13
Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS 219
P Y L+ T++GH V S+ F P E L S ++ I+ W + + + G +
Sbjct: 582 PGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD-INASCVRAVKG---AST 636
Query: 220 DVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
V + + ++A+ + T+ ++++ ++ K + KGHS+ V ++P L+ S S +
Sbjct: 637 QVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS-E 695
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTL 573
++V++W + +G C+ L + +V F+ L+V Y + +W+T +C+
Sbjct: 696 DAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI-ELWNTMENKCM--T 752
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ +S + SP+ + +A+ D ++K+W
Sbjct: 753 VAGHECVISALAQSPSTGVVASASHDKSVKIW 784
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Frame = +1
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T +
Sbjct: 486 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 542
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPXVSFVKF 612
H+ ++ V F + + + +SS+D +IWD + G L+T+ P +S + F
Sbjct: 543 ESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS-IDF 601
Query: 613 SPNGKYIL-AATLDNTLKLWD 672
P +L + +N ++ WD
Sbjct: 602 HPKKTELLCSCDSNNDIRFWD 622
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +1
Query: 94 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 273
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS DK
Sbjct: 721 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 779
Query: 274 TLKVWE 291
++K+W+
Sbjct: 780 SVKIWK 785
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 103 bits (248), Expect = 9e-23
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAW-SSDSRL 249
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + + L
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-RT 426
+ S + ++ W++++ C++ +KG S V F P++ ++ + + +V I+D+
Sbjct: 611 LCSCDSNNDIRFWDINA-SCVRAVKGASTQV---RFQPRTGQFLAAASENTVSIFDIENN 666
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV 606
K + HS V +V ++ +G L+ S S D + ++W +SG C+ L + N S V
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDCIHELSNSGNKFHSVV 725
Query: 607 KFSPNGKYILAATLDNTLKLWDYSRGKC 690
F P+ +L ++LW+ KC
Sbjct: 726 -FHPSYPDLLVIGGYQAIELWNTMENKC 752
Score = 93.5 bits (222), Expect = 1e-19
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 3/203 (1%)
Frame = +1
Query: 103 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 282
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S DKT+K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 283 VWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPLPAH 456
+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R WD+ C++ +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGA 636
Query: 457 SDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYI 633
S + V F R G + ++S + I+D + + + V V +SPNG+ +
Sbjct: 637 S---TQVRFQPRTGQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-L 691
Query: 634 LAATLDNTLKLWDYSRGKCFEDI 702
+A+ ++ +KLW S G C ++
Sbjct: 692 VASVSEDAVKLWSLSSGDCIHEL 714
Score = 72.9 bits (171), Expect = 2e-13
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 405
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 406 RIWDVR-TGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
+IWD G L+ + H+ PV ++ F+ + L+ S + R WD + C++ +
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD-INASCVRAV-- 633
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ V+F P LAA +NT+ ++D
Sbjct: 634 --KGASTQVRFQPRTGQFLAAASENTVSIFD 662
Score = 72.9 bits (171), Expect = 2e-13
Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS 219
P Y L+ T++GH V S+ F P E L S ++ I+ W + + + G +
Sbjct: 584 PGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD-INASCVRAVKG---AST 638
Query: 220 DVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
V + + ++A+ + T+ ++++ ++ K + KGHS+ V ++P L+ S S +
Sbjct: 639 QVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS-E 697
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTL 573
++V++W + +G C+ L + +V F+ L+V Y + +W+T +C+
Sbjct: 698 DAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI-ELWNTMENKCM--T 754
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ +S + SP+ + +A+ D ++K+W
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Frame = +1
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T +
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPXVSFVKF 612
H+ ++ V F + + + +SS+D +IWD + G L+T+ P +S + F
Sbjct: 545 ESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS-IDF 603
Query: 613 SPNGKYIL-AATLDNTLKLWD 672
P +L + +N ++ WD
Sbjct: 604 HPKKTELLCSCDSNNDIRFWD 624
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +1
Query: 94 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 273
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS DK
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 274 TLKVWE 291
++K+W+
Sbjct: 782 SVKIWK 787
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 103 bits (248), Expect = 9e-23
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAW-SSDSRL 249
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + + L
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-RT 426
+ S + ++ W++++ C++ +KG S V F P++ ++ + + +V I+D+
Sbjct: 611 LCSCDSNNDIRFWDINA-SCVRAVKGASTQV---RFQPRTGQFLAAASENTVSIFDIENN 666
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV 606
K + HS V +V ++ +G L+ S S D + ++W +SG C+ L + N S V
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDCIHELSNSGNKFHSVV 725
Query: 607 KFSPNGKYILAATLDNTLKLWDYSRGKC 690
F P+ +L ++LW+ KC
Sbjct: 726 -FHPSYPDLLVIGGYQAIELWNTMENKC 752
Score = 93.5 bits (222), Expect = 1e-19
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 3/203 (1%)
Frame = +1
Query: 103 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 282
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S DKT+K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 283 VWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPLPAH 456
+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R WD+ C++ +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGA 636
Query: 457 SDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYI 633
S + V F R G + ++S + I+D + + + V V +SPNG+ +
Sbjct: 637 S---TQVRFQPRTGQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-L 691
Query: 634 LAATLDNTLKLWDYSRGKCFEDI 702
+A+ ++ +KLW S G C ++
Sbjct: 692 VASVSEDAVKLWSLSSGDCIHEL 714
Score = 72.9 bits (171), Expect = 2e-13
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 405
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 406 RIWDVR-TGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
+IWD G L+ + H+ PV ++ F+ + L+ S + R WD + C++ +
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD-INASCVRAV-- 633
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ V+F P LAA +NT+ ++D
Sbjct: 634 --KGASTQVRFQPRTGQFLAAASENTVSIFD 662
Score = 72.9 bits (171), Expect = 2e-13
Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS 219
P Y L+ T++GH V S+ F P E L S ++ I+ W + + + G +
Sbjct: 584 PGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD-INASCVRAVKG---AST 638
Query: 220 DVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
V + + ++A+ + T+ ++++ ++ K + KGHS+ V ++P L+ S S +
Sbjct: 639 QVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS-E 697
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTL 573
++V++W + +G C+ L + +V F+ L+V Y + +W+T +C+
Sbjct: 698 DAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI-ELWNTMENKCM--T 754
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ +S + SP+ + +A+ D ++K+W
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Frame = +1
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T +
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPXVSFVKF 612
H+ ++ V F + + + +SS+D +IWD + G L+T+ P +S + F
Sbjct: 545 ESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS-IDF 603
Query: 613 SPNGKYIL-AATLDNTLKLWD 672
P +L + +N ++ WD
Sbjct: 604 HPKKTELLCSCDSNNDIRFWD 624
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +1
Query: 94 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 273
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS DK
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 274 TLKVWE 291
++K+W+
Sbjct: 782 SVKIWK 787
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 103 bits (248), Expect = 9e-23
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAW-SSDSRL 249
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + + L
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-RT 426
+ S + ++ W++++ C++ +KG S V F P++ ++ + + +V I+D+
Sbjct: 611 LCSCDSNNDIRFWDINA-SCVRAVKGASTQV---RFQPRTGQFLAAASENTVSIFDIENN 666
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV 606
K + HS V +V ++ +G L+ S S D + ++W +SG C+ L + N S V
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDCIHELSNSGNKFHSVV 725
Query: 607 KFSPNGKYILAATLDNTLKLWDYSRGKC 690
F P+ +L ++LW+ KC
Sbjct: 726 -FHPSYPDLLVIGGYQAIELWNTMENKC 752
Score = 93.5 bits (222), Expect = 1e-19
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 3/203 (1%)
Frame = +1
Query: 103 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 282
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S DKT+K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 283 VWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPLPAH 456
+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R WD+ C++ +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGA 636
Query: 457 SDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYI 633
S + V F R G + ++S + I+D + + + V V +SPNG+ +
Sbjct: 637 S---TQVRFQPRTGQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-L 691
Query: 634 LAATLDNTLKLWDYSRGKCFEDI 702
+A+ ++ +KLW S G C ++
Sbjct: 692 VASVSEDAVKLWSLSSGDCIHEL 714
Score = 72.9 bits (171), Expect = 2e-13
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 405
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 406 RIWDVR-TGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
+IWD G L+ + H+ PV ++ F+ + L+ S + R WD + C++ +
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD-INASCVRAV-- 633
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ V+F P LAA +NT+ ++D
Sbjct: 634 --KGASTQVRFQPRTGQFLAAASENTVSIFD 662
Score = 72.9 bits (171), Expect = 2e-13
Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS 219
P Y L+ T++GH V S+ F P E L S ++ I+ W + + + G +
Sbjct: 584 PGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD-INASCVRAVKG---AST 638
Query: 220 DVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
V + + ++A+ + T+ ++++ ++ K + KGHS+ V ++P L+ S S +
Sbjct: 639 QVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS-E 697
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTL 573
++V++W + +G C+ L + +V F+ L+V Y + +W+T +C+
Sbjct: 698 DAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI-ELWNTMENKCM--T 754
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ +S + SP+ + +A+ D ++K+W
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Frame = +1
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T +
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPXVSFVKF 612
H+ ++ V F + + + +SS+D +IWD + G L+T+ P +S + F
Sbjct: 545 ESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS-IDF 603
Query: 613 SPNGKYIL-AATLDNTLKLWD 672
P +L + +N ++ WD
Sbjct: 604 HPKKTELLCSCDSNNDIRFWD 624
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +1
Query: 94 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 273
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS DK
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 274 TLKVWE 291
++K+W+
Sbjct: 782 SVKIWK 787
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 103 bits (248), Expect = 9e-23
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 3/208 (1%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAW-SSDSRL 249
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + + L
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-RT 426
+ S + ++ W++++ C++ +KG S V F P++ ++ + + +V I+D+
Sbjct: 611 LCSCDSNNDIRFWDINA-SCVRAVKGASTQV---RFQPRTGQFLAAASENTVSIFDIENN 666
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV 606
K + HS V +V ++ +G L+ S S D + ++W +SG C+ L + N S V
Sbjct: 667 NKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAV-KLWSLSSGDCIHELSNSGNKFHSVV 725
Query: 607 KFSPNGKYILAATLDNTLKLWDYSRGKC 690
F P+ +L ++LW+ KC
Sbjct: 726 -FHPSYPDLLVIGGYQAIELWNTMENKC 752
Score = 93.5 bits (222), Expect = 1e-19
Identities = 59/203 (29%), Positives = 106/203 (52%), Gaps = 3/203 (1%)
Frame = +1
Query: 103 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 282
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S DKT+K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 283 VWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPLPAH 456
+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R WD+ C++ +
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDI-NASCVRAVKGA 636
Query: 457 SDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYI 633
S + V F R G + ++S + I+D + + + V V +SPNG+ +
Sbjct: 637 S---TQVRFQPRTGQFLAAAS-ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGE-L 691
Query: 634 LAATLDNTLKLWDYSRGKCFEDI 702
+A+ ++ +KLW S G C ++
Sbjct: 692 VASVSEDAVKLWSLSSGDCIHEL 714
Score = 72.9 bits (171), Expect = 2e-13
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 405
++S D +L+ SA DK + +W + + + T + H++ + F P S + + SFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 406 RIWDVR-TGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
+IWD G L+ + H+ PV ++ F+ + L+ S + R WD + C++ +
Sbjct: 577 KIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD-INASCVRAV-- 633
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ V+F P LAA +NT+ ++D
Sbjct: 634 --KGASTQVRFQPRTGQFLAAASENTVSIFD 662
Score = 72.9 bits (171), Expect = 2e-13
Identities = 49/212 (23%), Positives = 105/212 (49%), Gaps = 3/212 (1%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS 219
P Y L+ T++GH V S+ F P E L S ++ I+ W + + + G +
Sbjct: 584 PGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWD-INASCVRAVKG---AST 638
Query: 220 DVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
V + + ++A+ + T+ ++++ ++ K + KGHS+ V ++P L+ S S +
Sbjct: 639 QVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVS-E 697
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTL 573
++V++W + +G C+ L + +V F+ L+V Y + +W+T +C+
Sbjct: 698 DAVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI-ELWNTMENKCM--T 754
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ +S + SP+ + +A+ D ++K+W
Sbjct: 755 VAGHECVISALAQSPSTGVVASASHDKSVKIW 786
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Frame = +1
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
S+ +T K + + C++ ++ V CC+F+ L+ S D+ V IW++ T +
Sbjct: 488 SSVHTETSKPFSFNEVSCIRK---SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPXVSFVKF 612
H+ ++ V F + + + +SS+D +IWD + G L+T+ P +S + F
Sbjct: 545 ESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS-IDF 603
Query: 613 SPNGKYIL-AATLDNTLKLWD 672
P +L + +N ++ WD
Sbjct: 604 HPKKTELLCSCDSNNDIRFWD 624
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +1
Query: 94 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 273
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS DK
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 274 TLKVWE 291
++K+W+
Sbjct: 782 SVKIWK 787
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 102 bits (245), Expect = 2e-22
Identities = 62/211 (29%), Positives = 112/211 (53%), Gaps = 7/211 (3%)
Frame = +1
Query: 40 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKF--EKTISGHKM 210
+P+ + TL GH+K V+S+KF + + + ++S+DK ++IWG + DG + T+ H
Sbjct: 251 RPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSA 310
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS----NYVFCCNFNPQSNLI 378
+ V + ++ VSAS D T ++LSSG CL + S NY F+P ++
Sbjct: 311 EVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYT-AAAFHPDGLIL 369
Query: 379 VSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
+G+ V+IWDV++ + H+ ++++ F+ +G + +++ DG+ R+WD
Sbjct: 370 GTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDGV-RLWDLRK-- 426
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLD 651
LK D P + V+F +G Y+ A D
Sbjct: 427 -LKNFRTFDFPDANSVEFDHSGSYLGIAASD 456
Score = 84.6 bits (200), Expect = 6e-17
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 6/196 (3%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 303
+A+ D ++ G+ T++GH ++ + + D+ L+++AS DKT+++W S
Sbjct: 237 IATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSED 296
Query: 304 ---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSD---P 465
TLK HS V + + VS S D + +D+ +G CL + S+
Sbjct: 297 GNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVN 356
Query: 466 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAAT 645
+A F+ DG ++ + + + +IWD S Q N ++ + FS NG ++ A
Sbjct: 357 YTAAAFHPDGLILGTGTAQSIVKIWDVKS-QANVAKFGGHNGEITSISFSENGYFLATAA 415
Query: 646 LDNTLKLWDYSRGKCF 693
LD ++LWD + K F
Sbjct: 416 LDG-VRLWDLRKLKNF 430
Score = 71.3 bits (167), Expect = 6e-13
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 5/185 (2%)
Frame = +1
Query: 133 SSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL 312
+S D L K KT +K GI + +I + D T +++ SG+ L
Sbjct: 201 ASVDALEKFTQLSSHPLHKT---NKPGIFSMDILHSKDVIATGGIDTTAVLFDRPSGQIL 257
Query: 313 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-RTGKCLK--PLPAHSDPVSAVHF 483
TL GHS V F ++L+++ S D++VRIW G L HS V AV
Sbjct: 258 STLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTV 317
Query: 484 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSF--VKFSPNGKYILAATLDNT 657
+ VS+S D +D +SG CL + D V++ F P+G + T +
Sbjct: 318 HATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSI 377
Query: 658 LKLWD 672
+K+WD
Sbjct: 378 VKIWD 382
Score = 61.7 bits (143), Expect = 5e-10
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Frame = +1
Query: 259 ASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 438
AS D K +LSS KT K +F + ++I +G D + ++D +G+ L
Sbjct: 201 ASVDALEKFTQLSSHPLHKTNKPG---IFSMDILHSKDVIATGGIDTTAVLFDRPSGQIL 257
Query: 439 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS--GQCLKTLIDDDNPXVSFVKF 612
L HS V+++ F D L++++S D RIW + + + D + V V
Sbjct: 258 STLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTV 317
Query: 613 SPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
KY ++A+LD+T +D S G C +
Sbjct: 318 HATNKYFVSASLDSTWCFYDLSSGLCLAQV 347
Score = 61.7 bits (143), Expect = 5e-10
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 9/217 (4%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKMGI 216
NYT + TL H+ V +V ++ S+S D + G + S + +
Sbjct: 298 NYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNY 357
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
+ A+ D ++ + + +K+W++ S + GH+ + +F+ + + + D
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
Query: 397 ESVRIWDVRTGKCLKPLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC---- 561
VR+WD+R LK P ++V F+ GS + ++ D R++ AS +
Sbjct: 418 -GVRLWDLRK---LKNFRTFDFPDANSVEFDHSGSYLGIAASD--IRVFQAASVKAEWNP 471
Query: 562 LKTLID-DDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+KTL D + VKF + KYI ++D L+++
Sbjct: 472 IKTLPDLSGTGKATSVKFGLDSKYIAVGSMDRNLRIF 508
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 102 bits (244), Expect = 3e-22
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 3/207 (1%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GH V+ V +SP+ + LA+ + D +K+W G T + H ++ + + +D+ +
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC-NFNPQSNLIVSGSFDE-SVRIWDVRT 426
+SAS D T++ W+ K KT + F +P +++ +G+ D + +W +T
Sbjct: 407 LSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKT 466
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPXVSF 603
G+ L H PV + F+ L+ SSS+D R+WD AS ++T N V
Sbjct: 467 GQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETF--RHNHDVLT 524
Query: 604 VKFSPNGKYILAATLDNTLKLWDYSRG 684
V F P+GK + ++TLD + WD G
Sbjct: 525 VAFRPDGKQLASSTLDGQINFWDTIEG 551
Score = 91.1 bits (216), Expect = 7e-19
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL--IKIWGAYDGKFEKTISGHKMGI 216
P++ L+ + +++ F+ G WL A KL + +W + GH +
Sbjct: 294 PDFICIHLLSISRQKLTTAVFNERGNWLTFGCA-KLGQLLVWDWRTETYILKQQGHYFDV 352
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
+ V +S DS+L+ + +DD +KVW + SG C T H+N V +F ++ ++S S D
Sbjct: 353 NCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLD 412
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD--GSLIVSSSYDGL-CRIWDTASGQCLK 567
+VR WD + K K + P V D G ++ + + D +W +GQ +K
Sbjct: 413 GTVRAWDFKRYKNYKTYTTPT-PRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQ-IK 470
Query: 568 TLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
++ V + FSP + + +++ D T++LWD K
Sbjct: 471 DILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 510
Score = 83.0 bits (196), Expect = 2e-16
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Frame = +1
Query: 52 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KMGISDV 225
T T HT AV+++ F + L S+S D ++ W K KT + + +S
Sbjct: 382 TCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLT 441
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 405
A S + D + VW +G+ L GH V F+P + L+ S S+D +V
Sbjct: 442 ADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 501
Query: 406 RIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
R+WDV K H+ V V F DG + SS+ DG WDT G + T+
Sbjct: 502 RLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTI 557
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +1
Query: 94 SVKFSPNGEWLASSSADKL-IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 270
S+ P+G+ + + + D I +W G+ + +SGH+ + + +S ++L+ S+S D
Sbjct: 439 SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWD 498
Query: 271 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLP 450
T+++W++ + K H++ V F P + S + D + WD G + +
Sbjct: 499 YTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 558
Query: 451 AHSD 462
D
Sbjct: 559 GRRD 562
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/97 (27%), Positives = 47/97 (48%)
Frame = +1
Query: 37 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 216
+K +K L+GH V + FSP + LASSS D +++W + K H +
Sbjct: 463 SKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDV 522
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 327
VA+ D + + S++ D + W+ G + T++G
Sbjct: 523 LTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 559
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
H V +V F P+G+ LASS+ D I W +G TI G + I+ +D R
Sbjct: 518 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRR-DIAGGRVMTDRRSAA 576
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYV 342
++S K S+ G S Y+
Sbjct: 577 NSSSGKCFTTLCYSADGGYILAAGTSRYI 605
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 1/119 (0%)
Frame = +1
Query: 340 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGS-LIVSSS 516
V C+++ +++V G + ++ + C+ L ++ FN G+ L +
Sbjct: 267 VTACDYHQGLDMVVVGFSNGVFGLYQMPDFICIHLLSISRQKLTTAVFNERGNWLTFGCA 326
Query: 517 YDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCF 693
G +WD + + V+ V +SP+ + + DN +K+W+ G CF
Sbjct: 327 KLGQLLVWDWRTETYILKQ-QGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCF 384
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FE--KTISGHKMGISDVAWSSDSR 246
V ++KFSPNG+++A KL++IW + + FE +T + + + WS DS
Sbjct: 96 VGALKFSPNGKFIA-VGIGKLVEIWRSPGFRRAVLPFERVRTFANSDDKVVSLEWSLDSD 154
Query: 247 LIVSASDDKTLKVWELS 297
++ S D + + ++
Sbjct: 155 YLLVGSRDLAARAFTIA 171
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 102 bits (244), Expect = 3e-22
Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 3/207 (1%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GH V+ V +SP+ + LA+ + D +K+W G T + H ++ + + +D+ +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC-NFNPQSNLIVSGSFDE-SVRIWDVRT 426
+SAS D T++ W+ K KT + F +P +++ +G+ D + +W +T
Sbjct: 447 LSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKT 506
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT-ASGQCLKTLIDDDNPXVSF 603
G+ L H PV + F+ L+ SSS+D R+WD AS ++T N V
Sbjct: 507 GQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETF--RHNHDVLT 564
Query: 604 VKFSPNGKYILAATLDNTLKLWDYSRG 684
V F P+GK + ++TLD + WD G
Sbjct: 565 VAFRPDGKQLASSTLDGQINFWDTIEG 591
Score = 91.1 bits (216), Expect = 7e-19
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 5/220 (2%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL--IKIWGAYDGKFEKTISGHKMGI 216
P++ L+ + +++ F+ G WL A KL + +W + GH +
Sbjct: 334 PDFICIHLLSISRQKLTTAVFNERGNWLTFGCA-KLGQLLVWDWRTETYILKQQGHYFDV 392
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
+ V +S DS+L+ + +DD +KVW + SG C T H+N V +F ++ ++S S D
Sbjct: 393 NCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLD 452
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD--GSLIVSSSYDGL-CRIWDTASGQCLK 567
+VR WD + K K + P V D G ++ + + D +W +GQ +K
Sbjct: 453 GTVRAWDFKRYKNYKTYTTPT-PRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTGQ-IK 510
Query: 568 TLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
++ V + FSP + + +++ D T++LWD K
Sbjct: 511 DILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASK 550
Score = 83.0 bits (196), Expect = 2e-16
Identities = 53/176 (30%), Positives = 78/176 (44%), Gaps = 2/176 (1%)
Frame = +1
Query: 52 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KMGISDV 225
T T HT AV+++ F + L S+S D ++ W K KT + + +S
Sbjct: 422 TCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLT 481
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 405
A S + D + VW +G+ L GH V F+P + L+ S S+D +V
Sbjct: 482 ADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 541
Query: 406 RIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
R+WDV K H+ V V F DG + SS+ DG WDT G + T+
Sbjct: 542 RLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTI 597
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +1
Query: 94 SVKFSPNGEWLASSSADKL-IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 270
S+ P+G+ + + + D I +W G+ + +SGH+ + + +S ++L+ S+S D
Sbjct: 479 SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWD 538
Query: 271 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLP 450
T+++W++ + K H++ V F P + S + D + WD G + +
Sbjct: 539 YTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIE 598
Query: 451 AHSD 462
D
Sbjct: 599 GRRD 602
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/97 (27%), Positives = 47/97 (48%)
Frame = +1
Query: 37 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 216
+K +K L+GH V + FSP + LASSS D +++W + K H +
Sbjct: 503 SKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDV 562
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 327
VA+ D + + S++ D + W+ G + T++G
Sbjct: 563 LTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 599
Score = 37.1 bits (82), Expect = 0.011
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
H V +V F P+G+ LASS+ D I W +G TI G + I+ +D R
Sbjct: 558 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRR-DIAGGRVMTDRRSAA 616
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYV 342
++S K S+ G S Y+
Sbjct: 617 NSSSGKCFTTLCYSADGGYILAAGTSRYI 645
Score = 33.9 bits (74), Expect = 0.11
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FE--KTISGHKMGISDVAWSSDSR 246
V ++KFSPNG+++A KL++IW + + FE +T + + + WS DS
Sbjct: 96 VGALKFSPNGKFIA-VGIGKLVEIWRSPGFRRAVLPFERVRTFANSDDKVVSLEWSLDSD 154
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVF 345
++ S D +++ C++ LKG N F
Sbjct: 155 YLLVGSRDLAARLF------CVRKLKGVLNKPF 181
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 1/119 (0%)
Frame = +1
Query: 340 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGS-LIVSSS 516
V C+++ +++V G + ++ + C+ L ++ FN G+ L +
Sbjct: 307 VTACDYHQGLDMVVVGFSNGVFGLYQMPDFICIHLLSISRQKLTTAVFNERGNWLTFGCA 366
Query: 517 YDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCF 693
G +WD + + V+ V +SP+ + + DN +K+W+ G CF
Sbjct: 367 KLGQLLVWDWRTETYILKQ-QGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCF 424
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 101 bits (242), Expect = 5e-22
Identities = 58/218 (26%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
L+ TL GHT V ++ S G+ + S S D + +W + + + GH +S V
Sbjct: 891 LRATLKGHTGTVRAIS-SDRGK-IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKML 948
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
S R +++A+ D T+K+W++ + C+ T+ S+ + ++ + ++ + D IW
Sbjct: 949 SGER-VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIW 1007
Query: 415 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPX 594
D+R+GK + L H+ + ++ D +++ S D R+W + G C L P
Sbjct: 1008 DIRSGKQMHKLKGHTKWIRSIRMVED--TLITGSDDWTARVWSVSRGSCDAVLACHAGP- 1064
Query: 595 VSFVKFSPNGKYILAATLDNTLKLWDYSRG--KCFEDI 702
V V++SP K I+ + D L+ W+ G KC ++I
Sbjct: 1065 VQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNI 1102
Score = 90.6 bits (215), Expect = 9e-19
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 2/203 (0%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH VS VK +GE + +++ D +K+W T+ I + + +
Sbjct: 935 LKGHDSQVSCVKML-SGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
++ +A D +W++ SGK + LKGH+ ++ + + +++GS D + R+W V
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIR--SIRMVEDTLITGSDDWTARVWSVSR 1051
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCLKTLIDDDNPXVS 600
G C L H+ PV +V ++ I++ S DGL R W+ G +C+K + + S
Sbjct: 1052 GSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSS---S 1108
Query: 601 FVKFSPNGKYILAATLDNTLKLW 669
+ + ++ DN++ L+
Sbjct: 1109 ILSINAGENWLGIGAADNSMSLF 1131
Score = 87.0 bits (206), Expect = 1e-17
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Frame = +1
Query: 130 SSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 303
S S D L+KIW + T+ GH + + SSD IVS SDD ++ VW+ +
Sbjct: 872 SGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTT 929
Query: 304 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 483
+ L+ LKGH + V C +++ + D +V++WDVRT C+ + S + ++ +
Sbjct: 930 QLLEELKGHDSQVSCVKM-LSGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEY 988
Query: 484 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLK 663
+ ++ ++ D + IWD SG+ + L + ++ + ++ + D T +
Sbjct: 989 DDSTGILAAAGRDTVANIWDIRSGKQMHKL-KGHTKWIRSIRMVED--TLITGSDDWTAR 1045
Query: 664 LWDYSRGKC 690
+W SRG C
Sbjct: 1046 VWSVSRGSC 1054
Score = 71.7 bits (168), Expect = 4e-13
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T+ + A+ S+++ + LA++ D + IW GK + GH I + D+
Sbjct: 975 TVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT 1034
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
+++ SDD T +VW +S G C L H+ V ++P I++GS D +R W+
Sbjct: 1035 --LITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLRFWEND 1092
Query: 424 TG--KCLKPLPAHSDPVSAVH 480
G KC+K + HS + +++
Sbjct: 1093 EGGIKCVKNITLHSSSILSIN 1113
Score = 53.6 bits (123), Expect = 1e-07
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = +1
Query: 367 SNLIVSGSFDESVRIWD--VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
+ +SGS D V+IWD +R + L H+ V A+ + D IVS S D +W
Sbjct: 867 AGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVW 924
Query: 541 DTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
D + Q L+ L D+ VS VK +G+ +L A D T+K+WD C
Sbjct: 925 DKQTTQLLEELKGHDS-QVSCVKML-SGERVLTAAHDGTVKMWDVRTDMC 972
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 101 bits (241), Expect = 6e-22
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 9/223 (4%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 225
N L TL+ H + S+K++ G++L + S D+ +W ++++ H DV
Sbjct: 354 NGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDV 413
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 405
W ++ S S D + + ++ + KT GH V C ++P +L+ S S D +
Sbjct: 414 DWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTA 472
Query: 406 RIWDVRTGKCLKPLPAHSDPVSAVHFNRDGS---------LIVSSSYDGLCRIWDTASGQ 558
+IW+++ + L H+ + + ++ G + S+S+D ++WD G+
Sbjct: 473 KIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGK 532
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
L + P S FSPNG+YI + +LD ++ +W GK
Sbjct: 533 MLCSFNGHREPVYSLA-FSPNGEYIASGSLDKSIHIWSIKEGK 574
Score = 97.5 bits (232), Expect = 8e-21
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 9/197 (4%)
Frame = +1
Query: 112 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 291
N A+SS D +I + + + KT +GH+ ++ V W L+ S SDD T K+W
Sbjct: 417 NNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWN 476
Query: 292 LSSGKCLKTLKGHSNYVFCCNF--------NPQSNL-IVSGSFDESVRIWDVRTGKCLKP 444
+ + L+ H+ ++ + NP L + S SFD +V++WD GK L
Sbjct: 477 IKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCS 536
Query: 445 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNG 624
H +PV ++ F+ +G I S S D IW G+ +KT N + V ++ G
Sbjct: 537 FNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTY--TGNGGIFEVCWNKEG 594
Query: 625 KYILAATLDNTLKLWDY 675
I A DN++ + D+
Sbjct: 595 NKIAACFADNSVCVLDF 611
Score = 93.5 bits (222), Expect = 1e-19
Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 19/249 (7%)
Frame = +1
Query: 13 PQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 192
P S S + PN ++ L GHT V + +SP+ LAS S D +IW +G F+
Sbjct: 246 PTSQTSHI--PNSDVRI-LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAV 302
Query: 193 ISG---------HKMG--------ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 321
+G H G ++ + W+ + L+ + S D ++W L +G+ + TL
Sbjct: 303 HTGRNINALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTL 361
Query: 322 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSL 501
H +F +N + + +++GS D + +WDV+ + + HS P V + + S
Sbjct: 362 SKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSF 421
Query: 502 IVSS--SYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDY 675
SS S LC+I +T KT V+ VK+ P G + + + D+T K+W+
Sbjct: 422 ATSSTDSMIYLCKIGETRPA---KTFTGHQG-EVNCVKWDPTGSLLASCSDDSTAKIWNI 477
Query: 676 SRGKCFEDI 702
+ D+
Sbjct: 478 KQSTFVHDL 486
Score = 92.7 bits (220), Expect = 2e-19
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 9/169 (5%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS--- 234
T GH V+ VK+ P G LAS S D KIW F + H I + WS
Sbjct: 443 TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTG 502
Query: 235 ------SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
+ + SAS D T+K+W+ GK L + GH V+ F+P I SGS D
Sbjct: 503 PGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLD 562
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
+S+ IW ++ GK +K + + V +N++G+ I + D + D
Sbjct: 563 KSIHIWSIKEGKIVKTYTGNGG-IFEVCWNKEGNKIAACFADNSVCVLD 610
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 101 bits (241), Expect = 6e-22
Identities = 70/219 (31%), Positives = 103/219 (47%), Gaps = 8/219 (3%)
Frame = +1
Query: 46 NYTLKFTLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG-IS 219
N LK ++ G H + ++SPNGEW+AS ++IWGAY+ K G I
Sbjct: 44 NNPLKVSIYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEFKVLAGRID 103
Query: 220 DVAWSSDSRLIVSASDDK---TLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSG 387
D+ WS+D IV++ D K ++ + SG + GHS V C P IV+
Sbjct: 104 DLQWSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTC 163
Query: 388 SFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 567
D V ++ K HS+ V+ V F DGS ++ S D I+D + + L
Sbjct: 164 GEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILG 223
Query: 568 TLIDDDNPXVSF--VKFSPNGKYILAATLDNTLKLWDYS 678
L DD S V +SP+GK +L + D + K+WD S
Sbjct: 224 ELSSDDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
Score = 64.5 bits (150), Expect = 7e-11
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 15/231 (6%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI------SGH 204
P + K + H+ V+ V+F+P+G + S+DK I YDGK + + GH
Sbjct: 175 PPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGII---YDGKTCEILGELSSDDGH 231
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWELS---SGKCLKTLK--GHSNYV--FCCNFNP 363
K I V+WS D + +++ S DK+ K+W++S SG TL G S V
Sbjct: 232 KGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGCLW 291
Query: 364 QSNLIVSGSFDESVRIWDVR-TGKCLKPLPAHSDPVSAVH-FNRDGSLIVSSSYDGLCRI 537
Q++ IV+ S ++ I+ K H VS++ + I+S SYDGL
Sbjct: 292 QNDHIVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSYDGLICK 351
Query: 538 WDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
W G C K L N + F+ + + I+ + DN + Y +C
Sbjct: 352 WMLGRGFCGK-LQRTQNSQIKC--FAAHEEEIVTSGYDNKISRISYKDDQC 399
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Frame = +1
Query: 31 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHK 207
S+ + T + L H A+S +++SP+ AS+ ++ +W + + K + H
Sbjct: 475 SINGDSLTEEAVLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHS 534
Query: 208 MGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKG-HSNYVFCCNFNPQSNLIV 381
I+ +AWS +S ++ + S D + V+E+ T+KG H V+ F S+++
Sbjct: 535 ARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADDSHVVS 594
Query: 382 SGSFDESVRIW 414
SG D +R+W
Sbjct: 595 SGE-DACIRVW 604
Score = 52.8 bits (121), Expect = 2e-07
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKF--EKTISGHKMGISDVAWSSDSRLIVSA 261
V+++ +P+G D + ++ E + H+ IS + +S D + SA
Sbjct: 450 VTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLSMFASA 509
Query: 262 SDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR--TGK 432
++ VW+ S + LK + HS + C ++P S ++ +GS D V +++V
Sbjct: 510 DLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASS 569
Query: 433 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
+ AH V + F D S +VSS D R+W
Sbjct: 570 RMTIKGAHLGGVYGLGF-ADDSHVVSSGEDACIRVW 604
Score = 36.7 bits (81), Expect = 0.015
Identities = 47/211 (22%), Positives = 91/211 (43%), Gaps = 7/211 (3%)
Frame = +1
Query: 61 FTLAGHTKAVSSVK-FSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKMGISDVA 228
F +GH K VSS+ N +++ S S D LI W + GK ++T + I A
Sbjct: 318 FQFSGHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRGFCGKLQRTQNSQ---IKCFA 374
Query: 229 WSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESV 405
+ + ++ S D+K ++ +C N + P S ++ +F+ V
Sbjct: 375 -AHEEEIVTSGYDNKISRI-SYKDDQCTNEESIDIGNQPKDLSLAPLSPDLLLVTFESGV 432
Query: 406 RIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL--KTLID 579
+R GK + + V+A+ DG+ V DG ++ + +G L + +++
Sbjct: 433 VF--LRDGKVVSTINL-GFIVTALAVTPDGTEAVIGGQDGKLHLY-SINGDSLTEEAVLE 488
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+S +++SP+ +A L+ +WD
Sbjct: 489 RHRGAISVIRYSPDLSMFASADLNREAVVWD 519
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 100 bits (239), Expect = 1e-21
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 4/198 (2%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
V S KF P +W+ + + D I+++ K H I VA ++S+SD
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 268 DKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLK 441
D +K+W+ +G C + +GHS+YV FNP+ +N S S D +++IW++ +
Sbjct: 120 DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Query: 442 PLPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFS 615
L AH V+ V + G +++ S D ++WD + C++TL D VS V F
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-DGHTHNVSAVCFH 238
Query: 616 PNGKYILAATLDNTLKLW 669
P I+ + D T+++W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
Score = 93.1 bits (221), Expect = 2e-19
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 249
H+ + V P ++ SSS D LIK+W +G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVR 423
SAS D+T+K+W L S TL H V C ++ +++GS D + ++WD +
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
T C++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 218 TKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 90.2 bits (214), Expect = 1e-18
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 4/220 (1%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
+K A ++ V SV P W+ +S + IW K+ ++ + +
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFI 66
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
+ +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++W
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 415 DVRTG-KCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
D G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 127 DWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
Query: 589 PXVSFVKFSPNG--KYILAATLDNTLKLWDYSRGKCFEDI 702
V+ V + G Y++ + D+T K+WDY C + +
Sbjct: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Score = 86.2 bits (204), Expect = 2e-17
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAW--SS 237
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
D +++ SDD T KVW+ + C++TL GH++ V F+P+ +I++GS D +VRIW
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
T + L + V A+ + + +V +G
Sbjct: 258 ATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEG 293
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 399
+ +I++ S+D T+++W ++ + TL V+ + S +V G +DE
Sbjct: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIG-YDE 292
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 244 RLIVSASDDKTLKV 285
R +V D+ T+ V
Sbjct: 284 RRVVIGYDEGTIMV 297
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/125 (21%), Positives = 55/125 (44%)
Frame = +1
Query: 331 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVS 510
S V + +P I++ + +V IW+ +T K PV + F +V+
Sbjct: 15 SERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVA 74
Query: 511 SSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
+ D R+++ + +K + + + + V P Y+L+++ D +KLWD+ G
Sbjct: 75 GADDMYIRVYNYNTMDKVK-VFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWA 133
Query: 691 FEDIY 705
I+
Sbjct: 134 CTQIF 138
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 100 bits (239), Expect = 1e-21
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 4/198 (2%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
V S KF P +W+ + + D I+++ K H I VA ++S+SD
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 268 DKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLK 441
D +K+W+ +G C + +GHS+YV FNP+ +N S S D +++IW++ +
Sbjct: 120 DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Query: 442 PLPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFS 615
L AH V+ V + G +++ S D ++WD + C++TL D VS V F
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-DGHTHNVSAVCFH 238
Query: 616 PNGKYILAATLDNTLKLW 669
P I+ + D T+++W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
Score = 93.1 bits (221), Expect = 2e-19
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 249
H+ + V P ++ SSS D LIK+W +G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVR 423
SAS D+T+K+W L S TL H V C ++ +++GS D + ++WD +
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
T C++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 218 TKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 90.2 bits (214), Expect = 1e-18
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 4/220 (1%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
+K A ++ V SV P W+ +S + IW K+ ++ + +
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFI 66
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
+ +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++W
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 415 DVRTG-KCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
D G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 127 DWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
Query: 589 PXVSFVKFSPNG--KYILAATLDNTLKLWDYSRGKCFEDI 702
V+ V + G Y++ + D+T K+WDY C + +
Sbjct: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Score = 86.2 bits (204), Expect = 2e-17
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAW--SS 237
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
D +++ SDD T KVW+ + C++TL GH++ V F+P+ +I++GS D +VRIW
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
T + L + V A+ + + +V +G
Sbjct: 258 ATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEG 293
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 399
+ +I++ S+D T+++W ++ + TL V+ + S +V G +DE
Sbjct: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIG-YDE 292
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 244 RLIVSASDDKTLKV 285
R +V D+ T+ V
Sbjct: 284 RRVVIGYDEGTIMV 297
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/125 (21%), Positives = 55/125 (44%)
Frame = +1
Query: 331 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVS 510
S V + +P I++ + +V IW+ +T K PV + F +V+
Sbjct: 15 SERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVA 74
Query: 511 SSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
+ D R+++ + +K + + + + V P Y+L+++ D +KLWD+ G
Sbjct: 75 GADDMYIRVYNYNTMDKVK-VFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWA 133
Query: 691 FEDIY 705
I+
Sbjct: 134 CTQIF 138
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 100 bits (239), Expect = 1e-21
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 4/198 (2%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
V S KF P +W+ + + D I+++ K H I VA ++S+SD
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 268 DKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLK 441
D +K+W+ +G C + +GHS+YV FNP+ +N S S D +++IW++ +
Sbjct: 120 DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Query: 442 PLPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFS 615
L AH V+ V + G +++ S D ++WD + C++TL D VS V F
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-DGHTHNVSAVCFH 238
Query: 616 PNGKYILAATLDNTLKLW 669
P I+ + D T+++W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
Score = 93.1 bits (221), Expect = 2e-19
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 4/170 (2%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 249
H+ + V P ++ SSS D LIK+W +G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVR 423
SAS D+T+K+W L S TL H V C ++ +++GS D + ++WD +
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
T C++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 218 TKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 90.2 bits (214), Expect = 1e-18
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 4/220 (1%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
+K A ++ V SV P W+ +S + IW K+ ++ + +
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFI 66
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
+ +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++W
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 415 DVRTG-KCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
D G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 127 DWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
Query: 589 PXVSFVKFSPNG--KYILAATLDNTLKLWDYSRGKCFEDI 702
V+ V + G Y++ + D+T K+WDY C + +
Sbjct: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Score = 86.2 bits (204), Expect = 2e-17
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAW--SS 237
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
D +++ SDD T KVW+ + C++TL GH++ V F+P+ +I++GS D +VRIW
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
T + L + V A+ + + +V +G
Sbjct: 258 ATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEG 293
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 399
+ +I++ S+D T+++W ++ + TL V+ + S +V G +DE
Sbjct: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIG-YDE 292
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 244 RLIVSASDDKTLKV 285
R +V D+ T+ V
Sbjct: 284 RRVVIGYDEGTIMV 297
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/125 (21%), Positives = 55/125 (44%)
Frame = +1
Query: 331 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVS 510
S V + +P I++ + +V IW+ +T K PV + F +V+
Sbjct: 15 SERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVA 74
Query: 511 SSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
+ D R+++ + +K + + + + V P Y+L+++ D +KLWD+ G
Sbjct: 75 GADDMYIRVYNYNTMDKVK-VFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWA 133
Query: 691 FEDIY 705
I+
Sbjct: 134 CTQIF 138
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 99.5 bits (237), Expect = 2e-21
Identities = 62/215 (28%), Positives = 110/215 (51%), Gaps = 5/215 (2%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDG--KFEKTISGHKMG 213
P+ T + L HT V ++FS NG++LASSS D+ IW + DG + T+ GH
Sbjct: 263 PSQTAQI-LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKP 321
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
+ + WS D R +++ ++ ++ W++ SG C+ + C + P I++G
Sbjct: 322 VIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMT 381
Query: 394 DESVRIWDV--RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 567
D S+ +WD+ R +C K + VS + DG +VS D + ++D + ++
Sbjct: 382 DRSICMWDLDGREKECWK--GQRTQKVSDIAMTDDGKWLVSVCKDSVISLFDREA--TVE 437
Query: 568 TLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
LI++++ SF S + KYIL L+ ++LW+
Sbjct: 438 RLIEEEDMITSF-SLSNDNKYILVNLLNQEIRLWN 471
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +1
Query: 79 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 258
T+ VS + + +G+WL S D +I ++ + E+ I M I+ + S+D++ I+
Sbjct: 403 TQKVSDIAMTDDGKWLVSVCKDSVISLFDR-EATVERLIEEEDM-ITSFSLSNDNKYILV 460
Query: 259 ASDDKTLKVWELSSG-KCLKTLKGHSNYVFC---CNFNPQSNLIVSGSFDESVRIWDVRT 426
++ +++W + K + KGH F C + I SGS D V IW T
Sbjct: 461 NLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRST 520
Query: 427 GKCLKPLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIW 540
GK + LP H+ V+ V ++ ++ S+S DG RIW
Sbjct: 521 GKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 50.0 bits (114), Expect = 2e-06
Identities = 46/228 (20%), Positives = 99/228 (43%), Gaps = 6/228 (2%)
Frame = +1
Query: 37 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 216
A + +LK TL GH K V ++ +SP+ + + A+++I+ W G + K GI
Sbjct: 305 ADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSG--DCVHMYEKGGI 362
Query: 217 SDVA--WSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSG 387
S ++ W D + I++ D+++ +W+L G+ + KG + V +VS
Sbjct: 363 SPISCGWYPDGQGIIAGMTDRSICMWDL-DGREKECWKGQRTQKVSDIAMTDDGKWLVSV 421
Query: 388 SFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 567
D + ++D ++ L D +++ + D I+ + + R+W+ +
Sbjct: 422 CKDSVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIV 479
Query: 568 TLIDDDNPXVSFVKFSPNG---KYILAATLDNTLKLWDYSRGKCFEDI 702
+ ++ G +I + + D+ + +W S GK ++
Sbjct: 480 SRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVEL 527
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 121 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWEL 294
++AS S D + IW GK + GH ++ V+WS ++ ++ SASDD T+++W L
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGL 561
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWG 165
L GH AV+ V +SP N LAS+S D I+IWG
Sbjct: 527 LPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWG 560
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 571 LIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYS 678
+++ V F++FS NGKY+ +++ D T +W+ S
Sbjct: 269 ILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEIS 304
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/152 (30%), Positives = 77/152 (50%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
V + F P W+ +S +I++W G H+ + V + + L VS D
Sbjct: 12 VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 268 DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL 447
D +KVW + +CL TL GH +Y+ F+ ++ IVS S D+++RIW+ ++ C+ L
Sbjct: 72 DYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVL 131
Query: 448 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
H+ V F+ L+VS+S D R+WD
Sbjct: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
Score = 97.1 bits (231), Expect = 1e-20
Identities = 61/207 (29%), Positives = 99/207 (47%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
H V V F + S D IK+W + T+ GH I V + ++ IV
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
SASDD+T+++W S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ K
Sbjct: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKK 169
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFS 615
PA D + N D + G+ I +K +++ + V++ F
Sbjct: 170 KSASPA-DDLMRFSQMNSD-------LFGGVDAI--------VKYVLEGHDRGVNWASFH 213
Query: 616 PNGKYILAATLDNTLKLWDYSRGKCFE 696
P I++ D +KLW + K +E
Sbjct: 214 PTLPLIVSGADDRQVKLWRMNETKAWE 240
Score = 81.8 bits (193), Expect = 4e-16
Identities = 40/141 (28%), Positives = 72/141 (51%)
Frame = +1
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
I+++ +++W+ G + H V +F+ L VSG D +++W+ +T
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTH 83
Query: 430 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVK 609
+CL L H D + V F+ + IVS+S D RIW+ S C+ +++ N V
Sbjct: 84 RCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCI-SVLTGHNHYVMCAS 142
Query: 610 FSPNGKYILAATLDNTLKLWD 672
F P +++A+LD T+++WD
Sbjct: 143 FHPKEDLVVSASLDQTVRVWD 163
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +1
Query: 157 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC--LKTLKGH 330
++G D + + GH G++ ++ LIVS +DD+ +K+W ++ K + TL+GH
Sbjct: 188 LFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
Query: 331 SNYVFCCNFNPQSNLIVSGSFDESVRIWDV--RTG 429
N V F+ + ++IVS S D+S+R+WD RTG
Sbjct: 248 MNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTG 282
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/120 (27%), Positives = 61/120 (50%)
Frame = +1
Query: 331 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVS 510
SN V +F+P+ I++ +++WD R G + H PV VHF+ L VS
Sbjct: 9 SNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVS 68
Query: 511 SSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
D ++W+ + +CL TL+ + + V+F +I++A+ D T+++W++ C
Sbjct: 69 GGDDYKIKVWNYKTHRCLFTLLGHLD-YIRTVQFHHENPWIVSASDDQTIRIWNWQSRTC 127
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Frame = +1
Query: 16 QSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-- 189
Q N + +K+ L GH + V+ F P + S + D+ +K+W + K +
Sbjct: 183 QMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
Query: 190 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 369
T+ GH +S V + + +IVS S+DK+++VW+ + ++T + + + +P+
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEI 302
Query: 370 NLIVSG 387
NL+ +G
Sbjct: 303 NLLAAG 308
Score = 62.1 bits (144), Expect = 4e-10
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 2/209 (0%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 240
FTL GH + +V+F W+ S+S D+ I+IW ++GH + ++
Sbjct: 87 FTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
L+VSAS D+T++VW++ + K K S F+ Q N + G D V+
Sbjct: 147 EDLVVSASLDQTVRVWDIGALK----KKSASPADDLMRFS-QMNSDLFGGVDAIVKY--- 198
Query: 421 RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPX 594
L H V+ F+ LIVS + D ++W + + TL N
Sbjct: 199 -------VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMN-N 250
Query: 595 VSFVKFSPNGKYILAATLDNTLKLWDYSR 681
VS V F I++ + D ++++WD ++
Sbjct: 251 VSSVMFHAKQDIIVSNSEDKSIRVWDATK 279
Score = 58.8 bits (136), Expect = 3e-09
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 2/170 (1%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH V F P + + S+S D+ +++W G +K + D+ S
Sbjct: 131 LTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GALKKKSASPA---DDLMRFSQMN 185
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
+ D +K L+GH V +F+P LIVSG+ D V++W +
Sbjct: 186 SDLFGGVDAIVKY----------VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNE 235
Query: 427 GKC--LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 570
K + L H + VS+V F+ +IVS+S D R+WD ++T
Sbjct: 236 TKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQT 285
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 568 TLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
T + + V + F P +ILA+ ++LWDY G
Sbjct: 3 TKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMG 41
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 96.3 bits (229), Expect = 2e-20
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
V S KF +W+ + + D I+++ K H I VA ++S+SD
Sbjct: 60 VRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 268 DKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLK 441
D +K+W+ G C + +GHS+YV FNP+ +N S S D +++IW++ +
Sbjct: 120 DMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Query: 442 PLPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFS 615
L AH V+ V + G +++ S D ++WD + C++TL + VS V F
Sbjct: 180 TLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-EGHTHNVSAVCFH 238
Query: 616 PNGKYILAATLDNTLKLW 669
P I+ + D T+++W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
Score = 92.3 bits (219), Expect = 3e-19
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 249
H+ + V P ++ SSS D LIK+W G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNT 157
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVR 423
SAS D+T+K+W L S TL H V C ++ +++GS D + ++WD +
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
T C++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 91.9 bits (218), Expect = 4e-19
Identities = 56/220 (25%), Positives = 102/220 (46%), Gaps = 4/220 (1%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
+K LA ++ V SV P W+ +S + IW K+ ++ + +
Sbjct: 7 IKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFV 66
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
+ + +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++S S D +++W
Sbjct: 67 ARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 415 DVRTG-KCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
D G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 127 DWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHQ 185
Query: 589 PXVSFVKFSPNG--KYILAATLDNTLKLWDYSRGKCFEDI 702
V+ V + G Y++ + D+T K+WDY C + +
Sbjct: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Score = 87.4 bits (207), Expect = 8e-18
Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 5/156 (3%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAW--SS 237
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
D +++ SDD T KVW+ + C++TL+GH++ V F+P+ +I++GS D +VRIW
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
T + L + V A+ + + +V +G
Sbjct: 258 ATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEG 293
Score = 55.6 bits (128), Expect = 3e-08
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 399
+ +I++ S+D T+++W ++ + TL V+ + S +V G +DE
Sbjct: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVVIG-YDE 292
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 244 RLIVSASDDKTLKV 285
R +V D+ T+ V
Sbjct: 284 RRVVIGYDEGTIMV 297
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/131 (20%), Positives = 58/131 (44%)
Frame = +1
Query: 313 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD 492
+ L S V + +P I++ + ++ IW+ +T K PV + F
Sbjct: 9 RKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVAR 68
Query: 493 GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+V+ + D R+++ + +K + + + + V P Y+L+++ D +KLWD
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDKVK-VFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWD 127
Query: 673 YSRGKCFEDIY 705
+ +G I+
Sbjct: 128 WEKGWACTQIF 138
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 95.9 bits (228), Expect = 2e-20
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
V S KF +W+ + + D I+++ K H I VA ++S+SD
Sbjct: 60 VRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSD 119
Query: 268 DKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLK 441
D +K+W+ G C + +GHS+YV FNP+ +N S S D +++IW++ +
Sbjct: 120 DMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Query: 442 PLPAHSDPVSAVHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFS 615
L AH V+ V + G +++ S D ++WD + C++TL + VS V F
Sbjct: 180 TLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL-EGHTHNVSAVSFH 238
Query: 616 PNGKYILAATLDNTLKLW 669
P I+ + D T+++W
Sbjct: 239 PELPIIITGSEDGTVRIW 256
Score = 91.9 bits (218), Expect = 4e-19
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 4/170 (2%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKMGISDVAWS-SDSRL 249
H + V P ++ SSS D LIK+W G + GH + V ++ D+
Sbjct: 98 HADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNT 157
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVR 423
SAS D+T+K+W L S TL H V C ++ +++GS D + ++WD +
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQ 217
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
T C++ L H+ VSAV F+ + +I++ S DG RIW + + TL
Sbjct: 218 TKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 87.8 bits (208), Expect = 6e-18
Identities = 54/220 (24%), Positives = 101/220 (45%), Gaps = 4/220 (1%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
+K A ++ V SV P W+ +S + IW K+ ++ + +
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFI 66
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
+ + +V+ +DD ++V+ ++ +K + H++Y+ C +P ++S S D +++W
Sbjct: 67 ARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLW 126
Query: 415 DVRTG-KCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
D G C + HS V V FN +D + S+S D +IW+ S TL D
Sbjct: 127 DWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHL 185
Query: 589 PXVSFVKFSPNG--KYILAATLDNTLKLWDYSRGKCFEDI 702
V+ V + G Y++ + D+T K+WDY C + +
Sbjct: 186 KGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTL 225
Score = 87.0 bits (206), Expect = 1e-17
Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAW--SS 237
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H G++ V +
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHLKGVNCVDYFTGG 197
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
D +++ SDD T KVW+ + C++TL+GH++ V +F+P+ +I++GS D +VRIW
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYD 522
T + L + V A+ + GS V YD
Sbjct: 258 ATTYRLENTLNYGLERVWAIGHIK-GSRRVVIGYD 291
Score = 54.0 bits (124), Expect = 9e-08
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V++
Sbjct: 179 FTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFH 238
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
+ +I++ S+D T+++W ++ + TL V+ S +V G + S+ +
Sbjct: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSIMV 297
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 95.5 bits (227), Expect = 3e-20
Identities = 47/152 (30%), Positives = 76/152 (50%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
V + F P W+ +S +I++W G H+ + V + + L VS D
Sbjct: 12 VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 268 DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL 447
D +KVW + +CL TL GH +Y+ F+ + IVS S D+++RIW+ ++ C+ L
Sbjct: 72 DYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVL 131
Query: 448 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
H+ V F+ L+VS+S D R+WD
Sbjct: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
Score = 95.5 bits (227), Expect = 3e-20
Identities = 59/207 (28%), Positives = 102/207 (49%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
H V V F + S D IK+W + + T+ GH I V + + IV
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
SASDD+T+++W S C+ L GH++YV C +F+P+ +L+VS S D++VR+WD+ G
Sbjct: 110 SASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI--GAL 167
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFS 615
K + +D + + + + S + G+ I +K +++ + V++ F
Sbjct: 168 RKKTVSPADDIMRL------TQMNSDLFGGVDAI--------VKYVLEGHDRGVNWAAFH 213
Query: 616 PNGKYILAATLDNTLKLWDYSRGKCFE 696
P I++ D +KLW + K +E
Sbjct: 214 PTLPLIVSGADDRQVKLWRMNETKAWE 240
Score = 78.2 bits (184), Expect = 5e-15
Identities = 39/141 (27%), Positives = 71/141 (50%)
Frame = +1
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
I+++ +++W+ G + H V +F+ L VSG D +++W+ +
Sbjct: 24 ILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNH 83
Query: 430 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVK 609
+CL L H D + V F+ + IVS+S D RIW+ S C+ +++ N V
Sbjct: 84 RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCV-SVLTGHNHYVMCAS 142
Query: 610 FSPNGKYILAATLDNTLKLWD 672
F P +++A+LD T+++WD
Sbjct: 143 FHPKEDLVVSASLDQTVRVWD 163
Score = 68.1 bits (159), Expect = 5e-12
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = +1
Query: 157 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC--LKTLKGH 330
++G D + + GH G++ A+ LIVS +DD+ +K+W ++ K + TL+GH
Sbjct: 188 LFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
Query: 331 SNYVFCCNFNPQSNLIVSGSFDESVRIWDV--RTG 429
N V F+ + ++IVS S D+S+R+WD RTG
Sbjct: 248 MNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTG 282
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/120 (27%), Positives = 61/120 (50%)
Frame = +1
Query: 331 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVS 510
SN V +F+P+ I++ +++WD R G + H PV VHF+ L VS
Sbjct: 9 SNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVS 68
Query: 511 SSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
D ++W+ + +CL TL+ + + V+F +I++A+ D T+++W++ C
Sbjct: 69 GGDDYKIKVWNYKNHRCLFTLLGHLD-YIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTC 127
Score = 64.5 bits (150), Expect = 7e-11
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Frame = +1
Query: 16 QSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-- 189
Q N + +K+ L GH + V+ F P + S + D+ +K+W + K +
Sbjct: 183 QMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
Query: 190 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 369
T+ GH +S V + + +IVS S+DK+++VW+ + L+T + + + +P+
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEM 302
Query: 370 NLIVSG 387
NL+ +G
Sbjct: 303 NLLAAG 308
Score = 64.1 bits (149), Expect = 9e-11
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 30/205 (14%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 225
N+ FTL GH + +V+F W+ S+S D+ I+IW ++GH +
Sbjct: 82 NHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCA 141
Query: 226 AWSSDSRLI---------------------VSASDDKTLKVWELSSG------KCLK-TL 321
++ L+ VS +DD +++ +++S +K L
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADD-IMRLTQMNSDLFGGVDAIVKYVL 200
Query: 322 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC--LKPLPAHSDPVSAVHFNRDG 495
+GH V F+P LIVSG+ D V++W + K + L H + VS+V F+
Sbjct: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQ 260
Query: 496 SLIVSSSYDGLCRIWDTASGQCLKT 570
+IVS+S D R+WD L+T
Sbjct: 261 DIIVSNSEDKSIRVWDATKRTGLQT 285
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 568 TLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
T + + V + F P +ILA+ ++LWDY G
Sbjct: 3 TKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMG 41
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 95.1 bits (226), Expect = 4e-20
Identities = 60/215 (27%), Positives = 106/215 (49%), Gaps = 5/215 (2%)
Frame = +1
Query: 58 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWS 234
K TL HT ++ ++FSP+ LA+SS DK +++W A + G +T GH ++ + +
Sbjct: 686 KTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFH 745
Query: 235 S-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
LI S +D ++ W +++G C + KG S + F P+ ++ S V +
Sbjct: 746 PIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQI---RFQPRVGKYLAASSANLVNV 802
Query: 412 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---ASGQCLKTLIDD 582
DV T L H++P+++V ++ G + S S D + ++W + G+C+ L +
Sbjct: 803 LDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTGSEGECVHELSCN 861
Query: 583 DNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
N S V F P +L +L+LW+ S K
Sbjct: 862 GNKFQSCV-FHPAYPSLLVIGCYQSLELWNMSENK 895
Score = 88.6 bits (210), Expect = 4e-18
Identities = 61/214 (28%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Frame = +1
Query: 79 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 258
T V+ FS +G+ LAS+ DK +W K + T+ H I+D+ +S + +
Sbjct: 651 TTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLAT 710
Query: 259 ASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGK 432
+S DKT++VW+ + G L+T GHS+ V +F+P + +LI S D +R W + G
Sbjct: 711 SSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGS 770
Query: 433 CLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVK 609
C + S + + F R G + +SS + L + D + +L NP ++ V
Sbjct: 771 CTRVYKGGS---TQIRFQPRVGKYLAASSAN-LVNVLDVETQAIRHSLQGHANP-INSVC 825
Query: 610 FSPNGKYILAATLDNTLKLWDY---SRGKCFEDI 702
+ P+G + LA+ ++ +K+W S G+C ++
Sbjct: 826 WDPSGDF-LASVSEDMVKVWTLGTGSEGECVHEL 858
Score = 75.4 bits (177), Expect = 4e-14
Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 5/155 (3%)
Frame = +1
Query: 91 SSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
+ ++F P G++LA+SSA+ L+ + ++ GH I+ V W + S S+
Sbjct: 780 TQIRFQPRVGKYLAASSAN-LVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSE 838
Query: 268 DKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKC 435
D +KVW L S G+C+ L + N C F+P +L+V G + +S+ +W++ K
Sbjct: 839 DM-VKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYPSLLVIGCY-QSLELWNMSENKT 896
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
+ LPAH ++++ + L+ S+S+D L ++W
Sbjct: 897 MT-LPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Frame = +1
Query: 310 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR 489
+ +++ + V CC+F+ ++ S D+ +W T K L H+ ++ + F+
Sbjct: 644 VNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSP 703
Query: 490 DGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPXVSFVKFSP-NGKYILAATLDNTLK 663
+ +SS+D R+WD + G L+T + + V+ + F P I + DN ++
Sbjct: 704 SQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSS-MVTSLDFHPIKDDLICSCDNDNEIR 762
Query: 664 LWDYSRGKC 690
W + G C
Sbjct: 763 YWSINNGSC 771
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/125 (26%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKMGIS 219
++ +L GH ++SV + P+G++LAS S D ++K+W G E + +G+K
Sbjct: 810 IRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTGSEGECVHELSCNGNKFQSC 868
Query: 220 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 399
+ S L++ ++L++W +S K + TL H + + + L+ S S D+
Sbjct: 869 VFHPAYPSLLVIGCY--QSLELWNMSENKTM-TLPAHEGLITSLAVSTATGLVASASHDK 925
Query: 400 SVRIW 414
V++W
Sbjct: 926 LVKLW 930
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +1
Query: 151 IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 291
+++W + K T+ H+ I+ +A S+ + L+ SAS DK +K+W+
Sbjct: 886 LELWNMSENK-TMTLPAHEGLITSLAVSTATGLVASASHDKLVKLWK 931
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 93.9 bits (223), Expect = 9e-20
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 24/225 (10%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEW-------LASSSADKLIKIW--GAYDGKFE-KTI--SGHKM 210
L GHT V SV ++P LAS S D ++IW + + KT+ H
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWEL--SSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 384
+ AWS +L+ +AS D T +W+ S +C+ TL+GH N V ++N + + +
Sbjct: 76 TVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLAT 135
Query: 385 GSFDESVRIWDVRTGK---CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW----D 543
S D+SV IW+V G C L H+ V V ++ ++ S SYD ++W D
Sbjct: 136 CSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDD 195
Query: 544 TASGQCLKTLIDDDNPXVSFV---KFSPNGKYILAATLDNTLKLW 669
QC++TL + +N S V F+ G ++ + D TLK+W
Sbjct: 196 DGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIW 240
Score = 75.8 bits (178), Expect = 3e-14
Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 33/235 (14%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK---FEKTISGHKMGISDVAWS 234
TL GH V SV ++ +G LA+ S DK + IW +G ++GH + V W
Sbjct: 113 TLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWH 172
Query: 235 SDSRLIVSASDDKTLKVW--ELSSG--KCLKTL----KGHSNYVFCCNFNPQSNLIVSGS 390
++ S S D T+KVW E G +C++TL GHS+ V+ +FN + +V+ S
Sbjct: 173 PTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCS 232
Query: 391 FDESVRIW-----DVRTGKCLKP------LPAHSD-PVSAVHFNRDGSLIVSSSYDGLCR 534
D +++IW +++G+ P L + D + + H++RD +I S + D R
Sbjct: 233 DDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRD-DIIASGAGDNAIR 291
Query: 535 IW-----DTASGQCLKTLIDDDNP---XVSFVKFSP-NGKYILA-ATLDNTLKLW 669
++ D+ G L+ + V+ V++SP G +LA A+ D +K+W
Sbjct: 292 LFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLASASDDGMVKIW 346
Score = 64.9 bits (151), Expect = 5e-11
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 31/199 (15%)
Frame = +1
Query: 49 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKFE------KTISGH 204
Y L GHT+ V V++ P + L S S D IK+W + DG+++ ++ +GH
Sbjct: 153 YDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGH 212
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVW-----ELSSGK------CLKTLKG-HSNYVFC 348
+ +++++ +V+ SDD TLK+W ++ SG+ L TL G H ++
Sbjct: 213 SSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYS 272
Query: 349 CNFNPQSNLIVSGSFDESVRIW-----DVRTGK----CLKPLPAHSDPVSAVHFN--RDG 495
+++ + ++I SG+ D ++R++ D G LK AH + V++V ++
Sbjct: 273 AHWS-RDDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGN 331
Query: 496 SLIVSSSYDGLCRIWDTAS 552
L+ S+S DG+ +IW A+
Sbjct: 332 RLLASASDDGMVKIWQLAT 350
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein 3
(SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 91.5 bits (217), Expect = 5e-19
Identities = 67/217 (30%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAY----DGKFEK--TISGHK-MGISD---- 222
H + S+ PN + SAD +K W GK K T+S K M ++D
Sbjct: 486 HGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLA 545
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
VA S D++ I A D T+KV+ + S K +L GH V C + + LIV+GS D++
Sbjct: 546 VAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKN 605
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 582
++IW + G C K + AH D V V F R+ + S D L + WD + L TL +
Sbjct: 606 LKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTL-EG 664
Query: 583 DNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCF 693
+ + + S G +++ + D +++ WD S F
Sbjct: 665 HHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSEEPFF 701
Score = 88.6 bits (210), Expect = 4e-18
Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 6/199 (3%)
Frame = +1
Query: 91 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS------GHKMGISDVAWSSDSRLI 252
S++ + G+++ + + +K + IW G KT++ G + ++ +A SS S L+
Sbjct: 22 SNIAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIA-SSASSLV 79
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 432
D ++++W+ G C H V +N +++ SGS D + +WDV
Sbjct: 80 AVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGES 139
Query: 433 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKF 612
L L H D V+ + F G +VSSS D R+WD + C++ ++ + V V
Sbjct: 140 GLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQ-IVSGHHSEVWSVDT 198
Query: 613 SPNGKYILAATLDNTLKLW 669
P +Y++ + D L+ +
Sbjct: 199 DPEERYVVTGSADQELRFY 217
Score = 78.6 bits (185), Expect = 4e-15
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 2/124 (1%)
Frame = +1
Query: 52 TLKFTLA--GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 225
+LKF L+ GH V + S +GE + + S DK +KIWG G K+I H + V
Sbjct: 571 SLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGV 630
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 405
+ ++ + S D+ +K W+ + L TL+GH ++C + + + +V+GS D S+
Sbjct: 631 KFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSM 690
Query: 406 RIWD 417
R WD
Sbjct: 691 RRWD 694
Score = 77.0 bits (181), Expect = 1e-14
Identities = 35/124 (28%), Positives = 69/124 (55%)
Frame = +1
Query: 52 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 231
T + H AV++++++ G LAS S D I +W + GH+ ++D+ +
Sbjct: 97 TCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVF 156
Query: 232 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
+ +VS+S DK L+VW+L + C++ + GH + V+ + +P+ +V+GS D+ +R
Sbjct: 157 LDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRF 216
Query: 412 WDVR 423
+ V+
Sbjct: 217 YAVK 220
Score = 73.3 bits (172), Expect = 1e-13
Identities = 46/188 (24%), Positives = 84/188 (44%)
Frame = +1
Query: 25 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 204
+ V T + G + AV+S+ S + +A AD I+IW G E + H
Sbjct: 47 RQGVCSKTLTPSSSRGGPSLAVTSIASSASS-LVAVGYADGSIRIWDTEKGTCEVNFNSH 105
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 384
K ++ + ++ ++ S S D + +W++ L L+GH + V F +VS
Sbjct: 106 KGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVS 165
Query: 385 GSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 564
S D+ +R+WD+ T C++ + H V +V + + +V+ S D R +
Sbjct: 166 SSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYSSN 225
Query: 565 KTLIDDDN 588
+L+ D N
Sbjct: 226 GSLVSDSN 233
Score = 58.0 bits (134), Expect = 6e-09
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 12/223 (5%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSDSRL 249
GH V SV S + L S+S + +KIW G +TI SG+ G+ + +
Sbjct: 404 GHRSDVRSVTLSEDNTLLMSTSHSE-VKIWNPSTGSCLRTIDSGY--GLCSLIVPQNKYG 460
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV--- 420
IV L++ ++ S ++ +K H ++ P + V+ S D V+ W+
Sbjct: 461 IVGTKSG-VLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVK 519
Query: 421 -RTGKCLKPLPAHS-------DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 576
++GK K L + D V AV + D I + D +++ S + +L
Sbjct: 520 QKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLY 579
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDIY 705
P V + S +G+ I+ + D LK+W G C + I+
Sbjct: 580 GHKLP-VMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIF 621
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
++ H +V VKF N +L S D+L+K W A + T+ GH I +A S+
Sbjct: 619 SIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRG 678
Query: 244 RLIVSASDDKTLKVWELS 297
+V+ S D++++ W+ S
Sbjct: 679 DFLVTGSHDRSMRRWDRS 696
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/78 (20%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +1
Query: 469 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN---PXVSFVKFSPNGKYILA 639
S + ++ G +++ + + + IW G C KTL + P ++ + + ++A
Sbjct: 22 SNIAYDSTGKYVLAPALEKV-GIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVA 80
Query: 640 ATL-DNTLKLWDYSRGKC 690
D ++++WD +G C
Sbjct: 81 VGYADGSIRIWDTEKGTC 98
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 89.4 bits (212), Expect = 2e-18
Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 18/179 (10%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH AV F +G ++ + S D+L+KIW + GH+ I+D+A SS++
Sbjct: 301 LRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA 360
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL--IVSGSFDESVRIWD 417
L+ SAS+D ++VW L G + L+GH+ V F+P Q+++ ++S S D + RIWD
Sbjct: 361 LVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
Query: 418 VRTGKCLKPL--PAHSDP-------VSAVH------FNRDGSLIVSSSYDGLCRIWDTA 549
R + L + P+ SD S H +N +G++ V+ S D R+W +
Sbjct: 421 ARYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIFVTGSSDSNARVWSAS 479
Score = 80.6 bits (190), Expect = 9e-16
Identities = 39/129 (30%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Frame = +1
Query: 187 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 366
K + GH+ + + R +++ SDD+ +K+W + + CL + +GH + +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Query: 367 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 537
+ L+ S S D +R+W + G + L H+ V+A+ F+ R S+ ++SSS DG CRI
Sbjct: 359 NALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRI 418
Query: 538 WDTASGQCL 564
WD Q L
Sbjct: 419 WDARYSQWL 427
Score = 72.1 bits (169), Expect = 3e-13
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Frame = +1
Query: 310 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR 489
+K L+GH N V+C F+ +++GS D V+IW + T CL H ++ + +
Sbjct: 298 IKKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSS 357
Query: 490 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGK---YILAATLDNTL 660
+ +L+ S+S D + R+W G + +++ V+ + FSP +L+++ D T
Sbjct: 358 NNALVASASNDFVIRVWRLPDGMPI-SVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTC 416
Query: 661 KLWDYSRGKCFEDIY 705
++WD + IY
Sbjct: 417 RIWDARYSQWLPRIY 431
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +1
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSG 387
G++ + WS D+R +++A D + VW + G + L GHS + + +P + +S
Sbjct: 599 GVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSA 658
Query: 388 SFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 567
+D IWD+ G +K + F++DG+ IV S G +T G+ K
Sbjct: 659 GYDGKTIIWDIWEGIPIKVYEIGRFKLVDGKFSQDGTSIVLSDDVGQIYFLNTGQGESQK 718
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG--ISDVAWSSDSRLIV 255
+ V+ + +S + ++ ++ D I +W A DG ++GH + DV + R+ +
Sbjct: 598 RGVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDV-HPFNPRIAM 656
Query: 256 SASDDKTLKVWELSSGKCLK 315
SA D +W++ G +K
Sbjct: 657 SAGYDGKTIIWDIWEGIPIK 676
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 WD-40
repeats (PF00400); similiar to rab11 binding protein
(GI:4512103) [Bos taurus]
Length = 903
Score = 88.6 bits (210), Expect = 4e-18
Identities = 56/173 (32%), Positives = 95/173 (54%), Gaps = 10/173 (5%)
Frame = +1
Query: 190 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 366
++ GH I D++WS S+L++S+S DKT+++W++ + CLK L H++YV C F+P
Sbjct: 501 SLKGHLDAILDLSWSK-SQLLLSSSMDKTVRLWDIETKTCLK-LFAHNDYVTCIQFSPVD 558
Query: 367 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 546
N +SGS D +RIW ++ ++ H + V+A + DG + S+ G+CR +DT
Sbjct: 559 ENYFLSGSLDAKIRIWSIQDRHVVEWSDLH-EMVTAACYTPDGQGALIGSHKGICRAYDT 617
Query: 547 ASGQCLKT-LIDDDNPXVSFVK-------FSP-NGKYILAATLDNTLKLWDYS 678
+ +T ID + S K FSP N +L + D+ +++ D S
Sbjct: 618 EDCKLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSADSRIRILDGS 670
Score = 67.3 bits (157), Expect = 9e-12
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 20/222 (9%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
+ H AV ++KFS + +LAS AD++I +W + + G I S
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPIHPSLCDSSGN 459
Query: 247 LIVSASDDKTLK-------------------VWELSSGKCLKTLKGHSNYVFCCNFNPQS 369
I K K V+ S K + +LKGH + + +++ +S
Sbjct: 460 EITVVEKKKKGKGSSGRRHNHIPDYVHVPETVFSFSD-KPVCSLKGHLDAILDLSWS-KS 517
Query: 370 NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDT 546
L++S S D++VR+WD+ T CLK L AH+D V+ + F+ D + +S S D RIW
Sbjct: 518 QLLLSSSMDKTVRLWDIETKTCLK-LFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSI 576
Query: 547 ASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
++ D + V+ ++P+G+ L + + +D
Sbjct: 577 QDRHVVEW--SDLHEMVTAACYTPDGQGALIGSHKGICRAYD 616
Score = 40.7 bits (91), Expect = 0.001
Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 12/214 (5%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-D 240
+L GH A+ + +S + + L SSS DK +++W + K + H ++ + +S D
Sbjct: 501 SLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWD-IETKTCLKLFAHNDYVTCIQFSPVD 558
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
+S S D +++W + ++ H C + P + GS R +D
Sbjct: 559 ENYFLSGSLDAKIRIWSIQDRHVVEWSDLHEMVTAAC-YTPDGQGALIGSHKGICRAYDT 617
Query: 421 RTGKC--LKPLPAHSD-------PVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKT 570
K + S+ +++ F+ + S ++ +S D RI D + +
Sbjct: 618 EDCKLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSADSRIRILD--GSEVIHK 675
Query: 571 LIDDDNPXVSF-VKFSPNGKYILAATLDNTLKLW 669
N +S +GKYI+ A+ D+ + LW
Sbjct: 676 FKGFRNTCSQLSASYSQDGKYIICASEDSQVYLW 709
Score = 31.5 bits (68), Expect = 0.57
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +1
Query: 82 KAVSSVKFSP-NGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVA--WSSDSRL 249
+ ++S +FSP N + +SAD I+I DG + G + S ++ +S D +
Sbjct: 640 RKITSFQFSPVNPSEVLVTSADSRIRI---LDGSEVIHKFKGFRNTCSQLSASYSQDGKY 696
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 351
I+ AS+D + +W+ + TL S+ F C
Sbjct: 697 IICASEDSQVYLWKNDFHRTRSTLTTQSHEHFHC 730
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/45 (24%), Positives = 24/45 (53%)
Frame = +1
Query: 289 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
ELS+ + ++ H V+ F+ ++ + SG D + +W+V+
Sbjct: 390 ELSALHMCQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQ 434
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 86.2 bits (204), Expect = 2e-17
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 16/219 (7%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI-----SGHKMGISDVA 228
L GH VS ++ PN + L +SS D+ +W G SGH + V+
Sbjct: 90 LTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVS 149
Query: 229 WS-SDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
S S+ +S S D T ++W+ ++ + ++T GH V F P +GS D +
Sbjct: 150 ISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGT 209
Query: 403 VRIWDVRTGKCLKPLPAHSD----PVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQCLK 567
R++D+RTG L+ H D PV+++ F+ G L+ + + + C +WDT G+ +
Sbjct: 210 CRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVL 269
Query: 568 TL---IDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDY 675
L D +S + S +G + + D+ LK+W +
Sbjct: 270 DLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIWAF 308
Score = 66.9 bits (156), Expect = 1e-11
Identities = 53/214 (24%), Positives = 93/214 (43%), Gaps = 15/214 (7%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
V S+ ++P + S+S D + +W A + I + A+S + + +
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGL 65
Query: 268 DKTLKVWELSSGK-------CLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVR 423
D ++ LSS + L GH YV CC + P + +++ S D++ +WDV
Sbjct: 66 DSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 125
Query: 424 TGKCLKPL-----PAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDT-ASGQCLKTLIDD 582
TG H+ V +V + + +S S D R+WDT A+ + ++T
Sbjct: 126 TGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGH 185
Query: 583 DNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
+ V+ VKF P+G + D T +L+D G
Sbjct: 186 EG-DVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 218
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG----ISDVAW 231
T GH V++VKF P+G + S D +++ G + H G ++ +A+
Sbjct: 181 TFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAF 240
Query: 232 SSDSRLIVSA-SDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFD 396
S RL+ + + + T VW+ G+ + L H N + C + + + +GS+D
Sbjct: 241 SVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWD 300
Query: 397 ESVRIW 414
+++IW
Sbjct: 301 SNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 86.2 bits (204), Expect = 2e-17
Identities = 60/219 (27%), Positives = 103/219 (47%), Gaps = 16/219 (7%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI-----SGHKMGISDVA 228
L GH VS ++ PN + L +SS D+ +W G SGH + V+
Sbjct: 152 LTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVS 211
Query: 229 WS-SDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
S S+ +S S D T ++W+ ++ + ++T GH V F P +GS D +
Sbjct: 212 ISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGT 271
Query: 403 VRIWDVRTGKCLKPLPAHSD----PVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQCLK 567
R++D+RTG L+ H D PV+++ F+ G L+ + + + C +WDT G+ +
Sbjct: 272 CRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVL 331
Query: 568 TL---IDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDY 675
L D +S + S +G + + D+ LK+W +
Sbjct: 332 DLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIWAF 370
Score = 76.6 bits (180), Expect = 2e-14
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
TL GHT V S+ ++P + S+S D + +W A + I + A+S +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 244 RLIVSASDDKTLKVWELSSG-------KCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDE 399
+ + D ++ LSS + L GH YV CC + P + +++ S D+
Sbjct: 120 QSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQ 179
Query: 400 SVRIWDVRTGKCLKPL-----PAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDT-ASGQ 558
+ +WDV TG H+ V +V + + + +S S D R+WDT A+ +
Sbjct: 180 TCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASR 239
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
++T + V+ VKF P+G + D T +L+D G
Sbjct: 240 AVRTFHGHEG-DVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Score = 62.5 bits (145), Expect = 3e-10
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 16/187 (8%)
Frame = +1
Query: 160 WGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY 339
+GA D +T+ GH + + W+ + IVSAS D L VW + + +K +
Sbjct: 50 FGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW 109
Query: 340 VFCCNFNPQSNLIVSGSFDESVRIWDVR-------TGKCLKPLPAHSDPVSAVHF--NRD 492
V C F+P + G D I+ + T + L H VS + N D
Sbjct: 110 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNED 169
Query: 493 GSLIVSSSYDGLCRIWDTASGQCLKTLI------DDDNPXVSFVKFS-PNGKYILAATLD 651
LI SS D C +WD +G LKT + V V S N + ++ + D
Sbjct: 170 AHLITSSG-DQTCILWDVTTG--LKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCD 226
Query: 652 NTLKLWD 672
+T +LWD
Sbjct: 227 STARLWD 233
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Frame = +1
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
SA+ +T + + C +TL+GH+ V+ ++ P+ N IVS S D + +W+ T +
Sbjct: 40 SAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK 99
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-----GQC-LKTLIDDDNPXV 597
+ V F+ +G + D +C I+ +S G + ++ V
Sbjct: 100 THAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYV 159
Query: 598 SFVKFSPN-GKYILAATLDNTLKLWDYSRG 684
S ++ PN +++ ++ D T LWD + G
Sbjct: 160 SCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 86.2 bits (204), Expect = 2e-17
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 7/212 (3%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L H V+S+ S + LAS S D +K++ G+F+ I+ + I +A++
Sbjct: 58 LRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGS 117
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
L+ +A DD+ +K+ G ++ LKGH V +F+P L+ S +V W+++
Sbjct: 118 LLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQN 177
Query: 427 G------KCLKP-LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 585
G K + P ++ V+ ++ DG + ++D +G+ L L D
Sbjct: 178 GVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDH 237
Query: 586 NPXVSFVKFSPNGKYILAATLDNTLKLWDYSR 681
+ ++ ++PNGKYI + LD + LWD +
Sbjct: 238 LEAICYLTWAPNGKYIATSGLDKQVLLWDVDK 269
Score = 59.7 bits (138), Expect = 2e-09
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 7/173 (4%)
Frame = +1
Query: 187 KTISGHKMGIS----DVAWSSDSR-LIVSASDDKTLKVWE-LSSGKCLKT-LKGHSNYVF 345
K HK+G S + W + + S+S D ++ V + LS+ T L+ H + V
Sbjct: 7 KLREAHKVGGSAAFCSILWDHKAEHFVTSSSSDPSISVHDGLSTSTLPPTILRHHQDGVT 66
Query: 346 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
+ S L+ SGS D V+++ +G+ + + P+ + FN GSL+ ++ D
Sbjct: 67 SLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDE 126
Query: 526 LCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
++ +T G ++ L P V+ + F PNG+ + + T+ W+ G
Sbjct: 127 GIKLINTFDGSIVRVLKGHKGP-VTGLDFHPNGELLASIDTTGTVLCWELQNG 178
Score = 59.3 bits (137), Expect = 2e-09
Identities = 45/218 (20%), Positives = 92/218 (42%), Gaps = 8/218 (3%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISD 222
P+ + + T + + F+ +G LA++ D+ IK+ +DG + + GHK ++
Sbjct: 92 PSGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTG 151
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG-------HSNYVFCCNFNPQSNLIV 381
+ + + L+ S T+ WEL +G TLKG +++ V ++P +
Sbjct: 152 LDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLA 211
Query: 382 SGSFDESVRIWDVRTGKCLKPLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
V ++D TG+ L L H + + + + +G I +S D +WD Q
Sbjct: 212 VPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDVDKKQ 271
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ ++ + + + PNG + +W+
Sbjct: 272 DIDRHKFEER--ICCMSWKPNGNALSVIDAKGRYGVWE 307
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 85.4 bits (202), Expect = 3e-17
Identities = 61/251 (24%), Positives = 125/251 (49%), Gaps = 20/251 (7%)
Frame = +1
Query: 7 SAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 186
S + SS P + K TL+ H V +FSP+G + A+ AD IK++ K +
Sbjct: 8 SVNHAKGSSKTIPKHESK-TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV--PKVK 64
Query: 187 KTISG-------------HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK- 324
+ ISG H I+D+ + S +++S++ D +K ++ S + K
Sbjct: 65 QMISGDTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKV 124
Query: 325 -GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKP--LPAH--SDPVSAVHFNR 489
++ V +F+P +++G+ ++DV T +C P P S ++ V ++
Sbjct: 125 FQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSS 184
Query: 490 DGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPXVSFVKFSPNGKYILAATLDNTLKL 666
GS+ +++S DG R++D S +C++++ + V+ F+ + +++L++ D+T+KL
Sbjct: 185 TGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKL 244
Query: 667 WDYSRGKCFED 699
W+ G+ ++
Sbjct: 245 WEIGSGRMVKE 255
Score = 60.5 bits (140), Expect = 1e-09
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGH-KMGISDVAWS 234
F +G + A++ V++S G ++S D I+++ K ++I + H K ++ ++
Sbjct: 168 FPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFT 227
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN--FNPQSNLIVS-GSFDESV 405
D R ++S+ D T+K+WE+ SG+ +K G FN ++S V
Sbjct: 228 KDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEV 287
Query: 406 RIWDVRTGKCLKPLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
WD RT + P+ H+ + + S+ V+ D R W
Sbjct: 288 VTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 333
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 85.4 bits (202), Expect = 3e-17
Identities = 61/251 (24%), Positives = 125/251 (49%), Gaps = 20/251 (7%)
Frame = +1
Query: 7 SAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 186
S + SS P + K TL+ H V +FSP+G + A+ AD IK++ K +
Sbjct: 100 SVNHAKGSSKTIPKHESK-TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV--PKVK 156
Query: 187 KTISG-------------HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK- 324
+ ISG H I+D+ + S +++S++ D +K ++ S + K
Sbjct: 157 QMISGDTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKV 216
Query: 325 -GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKP--LPAH--SDPVSAVHFNR 489
++ V +F+P +++G+ ++DV T +C P P S ++ V ++
Sbjct: 217 FQDTHNVRSISFHPSGEFLLAGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSS 276
Query: 490 DGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPXVSFVKFSPNGKYILAATLDNTLKL 666
GS+ +++S DG R++D S +C++++ + V+ F+ + +++L++ D+T+KL
Sbjct: 277 TGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKL 336
Query: 667 WDYSRGKCFED 699
W+ G+ ++
Sbjct: 337 WEIGSGRMVKE 347
Score = 60.5 bits (140), Expect = 1e-09
Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 6/166 (3%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGH-KMGISDVAWS 234
F +G + A++ V++S G ++S D I+++ K ++I + H K ++ ++
Sbjct: 260 FPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFT 319
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN--FNPQSNLIVS-GSFDESV 405
D R ++S+ D T+K+WE+ SG+ +K G FN ++S V
Sbjct: 320 KDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAIFNDTEEFVISIDEASNEV 379
Query: 406 RIWDVRTGKCLKPLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
WD RT + P+ H+ + + S+ V+ D R W
Sbjct: 380 VTWDARTADKVAKWPSNHNGAPRWIEHSPVESVFVTCGIDRSIRFW 425
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 85.0 bits (201), Expect = 4e-17
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 375
GH + D++WS L+ S+S DKT+++W+LSS CLK HS+YV C FNP N
Sbjct: 466 GHLDDVLDLSWSKSQHLL-SSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVDDNY 523
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 546
+SGS D VRIW + + + H + V+A + DG + SY G C +++T
Sbjct: 524 FISGSLDAKVRIWSIPDHQVVDWNDLH-EMVTAACYTPDGQGALVGSYKGTCCLYNT 579
Score = 60.5 bits (140), Expect = 1e-09
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 23/225 (10%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---------------DGKFEKTI-- 195
+ H ++ S+KFS +G +LAS+ D +I+IW DG +
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFLLA 418
Query: 196 --SGHKMGISDVAWSSDSRLIVSASDDKTL---KVWELSSGKCLKTLKGHSNYVFCCNFN 360
S + +S S S S D L V+ LS K + + GH + V +++
Sbjct: 419 NGSPEPVSMSPKRRGRTSFSRKSVSLDNVLVPEAVFGLSE-KPVCSFVGHLDDVLDLSWS 477
Query: 361 PQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRI 537
+L+ S S D++VR+WD+ + CLK +HSD V+ + FN D + +S S D RI
Sbjct: 478 KSQHLL-SSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 538 WDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
W Q + +D + V+ ++P+G+ L + T L++
Sbjct: 536 WSIPDHQVVDW--NDLHEMVTAACYTPDGQGALVGSYKGTCCLYN 578
Score = 40.3 bits (90), Expect = 0.001
Identities = 41/215 (19%), Positives = 87/215 (40%), Gaps = 11/215 (5%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-D 240
+ GH V + +S + + L SSS DK +++W K S H ++ + ++ D
Sbjct: 463 SFVGHLDDVLDLSWSKS-QHLLSSSMDKTVRLWDLSSKTCLKVFS-HSDYVTCIQFNPVD 520
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
+S S D +++W + + + H C + P + GS+ + +++
Sbjct: 521 DNYFISGSLDAKVRIWSIPDHQVVDWNDLHEMVTAAC-YTPDGQGALVGSYKGTCCLYNT 579
Query: 421 RTGKCL---------KPLPAHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTASGQCLKT 570
K + H ++ F S ++ +S D R+ D
Sbjct: 580 HDNKLQQRREINLKNRKKKTHHKKITGFQFVAGSSSEVLVTSADSRTRVVDGVDLVHKFK 639
Query: 571 LIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDY 675
+ N +S + NGK++++A+ D+ + +W+Y
Sbjct: 640 GFRNTNSQIS-ASLTSNGKFLVSASEDSNVYVWNY 673
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 85.0 bits (201), Expect = 4e-17
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 5/226 (2%)
Frame = +1
Query: 40 KPNYTLKFTLAGHTKAVSSVKF-SPNGEW----LASSSADKLIKIWGAYDGKFEKTISGH 204
K YT + L GHT V + + P E+ L S S D + +W +G+ +T+ GH
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 384
+M ++ VA D+ IVS+S D+TLK W +G+ +++ H + + P L VS
Sbjct: 113 QMQVTGVA--IDNEDIVSSSVDQTLKRWR--NGQLVESWDAHQSPIQAVIRLPSGEL-VS 167
Query: 385 GSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 564
GS D S+++W +T L+ L H+D V + D + S+S+DG R+W SG+ L
Sbjct: 168 GSSDASLKLWKGKTS--LQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLW-ALSGEVL 223
Query: 565 KTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
++ + S S I++A+ D K+W G C + +
Sbjct: 224 LEMVGHTSLVYSVDAHSSG--LIVSASEDRHAKIW--KDGVCVQSL 265
Score = 59.7 bits (138), Expect = 2e-09
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Frame = +1
Query: 178 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGK----CLKTLKGHSNYV 342
K + GH + + +D I ++S D+T++VW L S K K L GH+++V
Sbjct: 11 KLRCELHGHDDDVRGICVCNDEN-IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFV 69
Query: 343 FCCNFNPQSN-----LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV 507
+ P ++ +VSGS D V +W++ G+ ++ L H V+ V D IV
Sbjct: 70 GPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAI--DNEDIV 127
Query: 508 SSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
SSS D + W +GQ +++ +P + ++ P+G+ +++ + D +LKLW
Sbjct: 128 SSSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRL-PSGE-LVSGSSDASLKLW 177
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 85.0 bits (201), Expect = 4e-17
Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 5/226 (2%)
Frame = +1
Query: 40 KPNYTLKFTLAGHTKAVSSVKF-SPNGEW----LASSSADKLIKIWGAYDGKFEKTISGH 204
K YT + L GHT V + + P E+ L S S D + +W +G+ +T+ GH
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 384
+M ++ VA D+ IVS+S D+TLK W +G+ +++ H + + P L VS
Sbjct: 113 QMQVTGVA--IDNEDIVSSSVDQTLKRWR--NGQLVESWDAHQSPIQAVIRLPSGEL-VS 167
Query: 385 GSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 564
GS D S+++W +T L+ L H+D V + D + S+S+DG R+W SG+ L
Sbjct: 168 GSSDASLKLWKGKTS--LQTLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLW-ALSGEVL 223
Query: 565 KTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
++ + S S I++A+ D K+W G C + +
Sbjct: 224 LEMVGHTSLVYSVDAHSSG--LIVSASEDRHAKIW--KDGVCVQSL 265
Score = 59.7 bits (138), Expect = 2e-09
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Frame = +1
Query: 178 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGK----CLKTLKGHSNYV 342
K + GH + + +D I ++S D+T++VW L S K K L GH+++V
Sbjct: 11 KLRCELHGHDDDVRGICVCNDEN-IATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSFV 69
Query: 343 FCCNFNPQSN-----LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV 507
+ P ++ +VSGS D V +W++ G+ ++ L H V+ V D IV
Sbjct: 70 GPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVAI--DNEDIV 127
Query: 508 SSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
SSS D + W +GQ +++ +P + ++ P+G+ +++ + D +LKLW
Sbjct: 128 SSSVDQTLKRW--RNGQLVESWDAHQSPIQAVIRL-PSGE-LVSGSSDASLKLW 177
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 85.0 bits (201), Expect = 4e-17
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Frame = +1
Query: 190 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 366
+ GH + D+AWS L+ S+S DKT+++W LSS CLK HS+YV C FNP
Sbjct: 508 SFQGHVDDVLDLAWSKSQHLL-SSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVD 565
Query: 367 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 546
+SGS D VR+W + + + H + V++ + DG ++ SY G CR++
Sbjct: 566 DRYFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSACYTPDGQGVLVGSYKGSCRMYSA 624
Query: 547 ASGQ 558
+ +
Sbjct: 625 SDNK 628
Score = 63.3 bits (147), Expect = 2e-10
Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 17/224 (7%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKM------GISD 222
+ H ++ S+KFS +G++LAS+ D +I IW + K E + ++ G +
Sbjct: 409 IQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLDRPELLLLATNGSPE 468
Query: 223 VAWSSDSRLIVSASDDKTLKVWEL--------SSGKCLKTLKGHSNYVFCCNFNPQSNLI 378
S R ++ K+L + + S K + +GH + V ++ +L+
Sbjct: 469 PTTMSPRRRGRTSISRKSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLL 528
Query: 379 VSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASG 555
S S D++VR+W++ + CLK +HSD V+ + FN D +S S D R+W
Sbjct: 529 -SSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDR 586
Query: 556 QCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
Q + D + V+ ++P+G+ +L + + +++ S K
Sbjct: 587 QVVDWY--DLHEMVTSACYTPDGQGVLVGSYKGSCRMYSASDNK 628
Score = 49.2 bits (112), Expect = 3e-06
Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 13/214 (6%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRL 249
GH V + +S + + L SSS DK +++W K S H ++ + ++ D R
Sbjct: 511 GHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDDRY 568
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
+S S D ++VW + + + H C + P ++ GS+ S R++
Sbjct: 569 FISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSAC-YTPDGQGVLVGSYKGSCRMYSASDN 627
Query: 430 KCL---------KPLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWD-TASGQCLKTL 573
K K AH ++ F ++V+SS D R+ D T LK
Sbjct: 628 KLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSEVLVTSS-DSRIRVVDGTDLVNKLKGF 686
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDY 675
+ + + + + +GKY+++A+ D+ + +W Y
Sbjct: 687 RNTSSQISASI--TADGKYVVSASEDSHVYIWKY 718
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +1
Query: 76 HTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS--SDS 243
H K ++ +F P + E L +SS D I++ D + G + S ++ S +D
Sbjct: 645 HQKKITGFQFVPGSSSEVLVTSS-DSRIRVVDGTD--LVNKLKGFRNTSSQISASITADG 701
Query: 244 RLIVSASDDKTLKVWELSS 300
+ +VSAS+D + +W+ S
Sbjct: 702 KYVVSASEDSHVYIWKYES 720
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 84.6 bits (200), Expect = 6e-17
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 7/207 (3%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL-IVSAS 264
VSSV F +G A+ +++++ + +T+ H V + +L +VS
Sbjct: 96 VSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGG 155
Query: 265 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVR--TGKC 435
DD +K W+++ + L GH +YV C + +P +++V+GS+D +V++WD R T
Sbjct: 156 DDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNW 215
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVS---FV 606
+ + H PV V + G LI ++ + + ++WD G + ++ N V+
Sbjct: 216 IAEI-NHGLPVEDVVYLPSGGLIATAGGNSV-KVWDLIGGGKMVCSMESHNKTVTSLRVA 273
Query: 607 KFSPNGKYILAATLDNTLKLWDYSRGK 687
+ +++ LD +K++DY R K
Sbjct: 274 RMESAESRLVSVALDGYMKVFDYGRAK 300
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 83.8 bits (198), Expect = 1e-16
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 375
GH + D+AWS DS L++SAS DKT+++W +CL H+NYV C FNP N
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNN 327
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
SGS D RIW + + + D +SA+ + +G+ V G CR +
Sbjct: 328 FASGSIDGKARIWGLSEERVVAWTDVR-DSISAISYQPNGNGFVVGCITGNCRFYQILDN 386
Query: 556 QCL--KTLIDDDNPXVSFVKFSP-NGKYILAATLDNTLKLWD 672
+ + ++ ++ V+F P + + IL ++ D+ ++++D
Sbjct: 387 DVIMDEQILIRGRNRITAVEFCPGSSEKILVSSEDSKVRIFD 428
Score = 60.1 bits (139), Expect = 1e-09
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GH + ++KFSP+G++LA+ D ++KIW ++ +SD +S R
Sbjct: 196 GHKGKIWTLKFSPDGKYLATGGEDGVVKIW--------------RITLSDSLLASFLRQQ 241
Query: 253 VSASDDKTLKVWELSSGKCLKT----LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
+ L ++ + +T L GH+ V ++ SNL++S S D++VR+W
Sbjct: 242 EPINQQAALVLFPQKAFHIEETPFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWRT 300
Query: 421 RTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXV 597
+CL H++ V+ V FN + + S S DG RIW + + + D +
Sbjct: 301 GCDQCLHVF-HHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLSEERVVAW--TDVRDSI 357
Query: 598 SFVKFSPNGKYILAATLDNTLKLW 669
S + + PNG + + + +
Sbjct: 358 SAISYQPNGNGFVVGCITGNCRFY 381
Score = 44.8 bits (101), Expect = 6e-05
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQS 369
I+GHK I + +S D + + + +D +K+W ++ S L + + N Q+
Sbjct: 194 INGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLRQQEPI-----NQQA 248
Query: 370 NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 549
L++ ++ I + + L H+ V + ++ D +L++S+S D R+W T
Sbjct: 249 ALVLFP--QKAFHIEETP----FQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTG 301
Query: 550 SGQCLKTLIDDDNPXVSFVKFSP-NGKYILAATLDNTLKLWDYS 678
QCL + N V+ V+F+P N + ++D ++W S
Sbjct: 302 CDQCLH--VFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLS 343
Score = 32.7 bits (71), Expect = 0.25
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 289 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
ELS+ ++ + GH ++ F+P + +G D V+IW +
Sbjct: 184 ELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRI 227
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 WD-40
repeats (PF00400); rab11 binding protein, Bos taurus,
EMBL:AF117897
Length = 905
Score = 82.6 bits (195), Expect = 2e-16
Identities = 51/170 (30%), Positives = 93/170 (54%), Gaps = 9/170 (5%)
Frame = +1
Query: 190 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 366
+ +GH + D++WS S+L++S+S DKT+++W++ + CLK L H++YV C FNP
Sbjct: 514 SFTGHLDDVLDLSWSR-SQLLLSSSMDKTVRLWDIETQSCLK-LFAHNDYVTCVQFNPLD 571
Query: 367 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 546
+ +SGS D +RIW++ + ++ + V+AV + DG S +G CR++
Sbjct: 572 EDYFISGSLDAKIRIWNISNRQVVE-WNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYSA 630
Query: 547 ASGQCLKT-LIDDDN------PXVSFVKFSP-NGKYILAATLDNTLKLWD 672
+ +T ID N ++ +FSP N +L + D+ +++ D
Sbjct: 631 EDCKLEQTNQIDLQNKKKAQAKKITAFQFSPINPSEVLVTSADSRIRVLD 680
Score = 67.3 bits (157), Expect = 9e-12
Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 26/234 (11%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI-SDVAWSSDS 243
+ H + ++KFSP+ LAS+ D I +W + + G I ++ S+D
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMSMNEGSLTPIHPSMSGSTDK 466
Query: 244 RL---IVSASDDKTLK---------------------VWELSSGKCLKTLKGHSNYVFCC 351
S DK K V+ LS K + + GH + V
Sbjct: 467 SSEGDAAEVSQDKKKKGKTSMSKKGNQIPDYVHAPETVFSLSD-KPICSFTGHLDDVLDL 525
Query: 352 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGL 528
+++ +S L++S S D++VR+WD+ T CLK L AH+D V+ V FN D +S S D
Sbjct: 526 SWS-RSQLLLSSSMDKTVRLWDIETQSCLK-LFAHNDYVTCVQFNPLDEDYFISGSLDAK 583
Query: 529 CRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
RIW+ ++ Q ++ +D V+ V ++P+G+ +++ +L YS C
Sbjct: 584 IRIWNISNRQVVEW--NDLKEMVTAVCYTPDGQAAFVGSINGHCRL--YSAEDC 633
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/78 (23%), Positives = 41/78 (52%)
Frame = +1
Query: 289 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPV 468
+LS+ + ++ H ++ F+P S+L+ S D ++ +W+V+ +C + + + +
Sbjct: 397 DLSALHMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQ--EC-EIMSMNEGSL 453
Query: 469 SAVHFNRDGSLIVSSSYD 522
+ +H + GS SS D
Sbjct: 454 TPIHPSMSGSTDKSSEGD 471
Score = 32.3 bits (70), Expect = 0.32
Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-D 240
+ GH V + +S + L SSS DK +++W K + H ++ V ++ D
Sbjct: 514 SFTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDIETQSCLK-LFAHNDYVTCVQFNPLD 571
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
+S S D +++W +S+ + ++ C + P GS + R++
Sbjct: 572 EDYFISGSLDAKIRIWNISNRQVVEWNDLKEMVTAVC-YTPDGQAAFVGSINGHCRLYSA 630
Query: 421 RTGK 432
K
Sbjct: 631 EDCK 634
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Frame = +1
Query: 82 KAVSSVKFSP-NGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDV--AWSSDSRL 249
K +++ +FSP N + +SAD I++ DG + + G K S + +++ D++
Sbjct: 652 KKITAFQFSPINPSEVLVTSADSRIRV---LDGTELVQKFRGFKNMNSQMTASYTVDAKH 708
Query: 250 IVSASDDKTLKVWE 291
IV AS+D + VW+
Sbjct: 709 IVCASEDSQVYVWK 722
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 82.6 bits (195), Expect = 2e-16
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 1/156 (0%)
Frame = +1
Query: 31 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 210
S+ +P+ K V SV +SPNG+ LA S D I ++ K + GH M
Sbjct: 142 SIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNM 201
Query: 211 GISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 387
+ + +S D R++ S SDD + + + L ++ GH+++V + +P I +G
Sbjct: 202 PVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATG 261
Query: 388 SFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDG 495
S D +VR+WD++ ++ + H+D V +V F G
Sbjct: 262 SSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPG 297
Score = 69.3 bits (162), Expect = 2e-12
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Frame = +1
Query: 88 VSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTIS-------------GHKMGISDV 225
V ++F P G LA + + +K+W + T+S K + V
Sbjct: 105 VWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSV 164
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDES 402
AWS + + + S D T+ V+++ K L L+GH+ V F+P ++ SGS D
Sbjct: 165 AWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGH 224
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 582
V + D L + H+ V +V + DG I + S D R+WD ++T+ +
Sbjct: 225 VNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNH 284
Query: 583 DNPXVSFVKFSPNGKYILAATL-----DNTLKLWDYS 678
++ S P G + A L D ++ L+DYS
Sbjct: 285 NDQVWSVAFRPPGGTGVRAGRLASVSDDKSVSLYDYS 321
Score = 68.9 bits (161), Expect = 3e-12
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 13/165 (7%)
Frame = +1
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
L+++ S D+T+K+W ++T GHS V +P + S S D VR++DV T
Sbjct: 32 LLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDT 91
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLI-VSSSYDGLCRIWDTASGQCLKTLI----DDDNP 591
+ L A V + F G+++ V+ ++WDTAS + + TL D P
Sbjct: 92 NATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKP 151
Query: 592 --------XVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
V V +SPNGK + ++D T+ ++D R K +
Sbjct: 152 SDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQL 196
Score = 67.7 bits (158), Expect = 7e-12
Identities = 58/222 (26%), Positives = 100/222 (45%), Gaps = 19/222 (8%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS--- 234
T GH+ V+++ P+G ASSS D +++ +D TI+ + S+V W
Sbjct: 55 TNTGHSLGVAALAAHPSGIIAASSSIDSFVRV---FDVDTNATIAVLEAPPSEV-WGMQF 110
Query: 235 --SDSRLIVSASDDKTLKVWELSSGKCLKTLK-------------GHSNYVFCCNFNPQS 369
+ L V+ ++K+W+ +S + + TL +V ++P
Sbjct: 111 EPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNG 170
Query: 370 NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDT 546
+ GS D ++ ++DV K L L H+ PV ++ F+ D ++ S S DG + D
Sbjct: 171 KRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD- 229
Query: 547 ASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
A G+ L + V V SP+G I + D T++LWD
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWD 271
Score = 60.1 bits (139), Expect = 1e-09
Identities = 45/191 (23%), Positives = 89/191 (46%), Gaps = 14/191 (7%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 303
L + S D+ +K+W + +T +GH +G++ +A + S+S D ++V+++ +
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTN 92
Query: 304 KCLKTLKGHSNYVFCCNFNPQSNLI-VSGSFDESVRIWDVRTGKCLKPL-------PAHS 459
+ L+ + V+ F P+ ++ V+G SV++WD + + + L P S
Sbjct: 93 ATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPS 152
Query: 460 DPVS------AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPN 621
D S +V ++ +G + S DG ++D + L L + P S V FSP
Sbjct: 153 DKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLV-FSPV 211
Query: 622 GKYILAATLDN 654
+L + D+
Sbjct: 212 DPRVLFSGSDD 222
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 81.8 bits (193), Expect = 4e-16
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 5/211 (2%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT----ISGHKMGISDVAWS-S 237
GH K V SV ++ NG LAS S D+ +IW K + GH + + W
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
S L+ +AS DK++++W+ SGKC + ++ S + P + G+ D+ + I D
Sbjct: 78 HSDLVATASGDKSVRLWDARSGKCTQQVE-LSGENINITYKPDGTHVAVGNRDDELTILD 136
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXV 597
VR K L + + V+ + +N G ++ G + S + L TL
Sbjct: 137 VRKFKPLHRRKFNYE-VNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTL-TAHTAGC 194
Query: 598 SFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
+ P G+Y + D+ + LWD S C
Sbjct: 195 YCIAIDPKGRYFAVGSADSLVSLWDISDMLC 225
Score = 58.8 bits (136), Expect = 3e-09
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Frame = +1
Query: 94 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG--ISDVAWSSDSRLIVSASD 267
++ + P+G +A + D + I D + K + K ++++AW+ +
Sbjct: 113 NITYKPDGTHVAVGNRDDELTI---LDVRKFKPLHRRKFNYEVNEIAWNMPGDFFFLTTG 169
Query: 268 DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL 447
T++V S K L TL H+ +C +P+ GS D V +WD+ CL+
Sbjct: 170 LGTVEVLSYPSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTF 229
Query: 448 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
PV + FN G I S+S D I + +G+
Sbjct: 230 TKLEWPVRTISFNYSGEYIASASEDLFIDIANVQTGR 266
Score = 58.4 bits (135), Expect = 4e-09
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 2/214 (0%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
L GHT +V + + P + + +A++S DK +++W A GK + + I+ + + D
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENIN-ITYKPDG 120
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDV 420
+ + D L + ++ K L K NY V +N + + +V +
Sbjct: 121 THVAVGNRDDELTILDVRKFKPLHRRK--FNYEVNEIAWNMPGDFFFLTTGLGTVEVLSY 178
Query: 421 RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVS 600
+ K L L AH+ + + G S D L +WD + CL+T + P V
Sbjct: 179 PSLKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWP-VR 237
Query: 601 FVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
+ F+ +G+YI +A+ D + + + G+ I
Sbjct: 238 TISFNYSGEYIASASEDLFIDIANVQTGRTVHQI 271
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Frame = +1
Query: 322 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK----PLPAHSDPVSAVHFN- 486
+GH V +N + SGS D++ RIW++ K L H+D V + ++
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDP 76
Query: 487 RDGSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPXVSFVKFSPNGKYILAATLDNTLK 663
+ L+ ++S D R+WD SG+C + + + +N ++ + P+G ++ D+ L
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINIT---YKPDGTHVAVGNRDDELT 133
Query: 664 LWDYSRGK 687
+ D + K
Sbjct: 134 ILDVRKFK 141
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/113 (22%), Positives = 52/113 (46%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
TL HT + P G + A SAD L+ +W D +T + + + ++++
Sbjct: 186 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSG 245
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
I SAS+D + + + +G+ + + + + +NP+ NL+ D++
Sbjct: 246 EYIASASEDLFIDIANVQTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKN 297
Score = 44.4 bits (100), Expect = 8e-05
Identities = 28/111 (25%), Positives = 51/111 (45%)
Frame = +1
Query: 190 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 369
T++ H G +A R S D + +W++S CL+T V +FN
Sbjct: 186 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSG 245
Query: 370 NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYD 522
I S S D + I +V+TG+ + +P + +++V +N +L+ + D
Sbjct: 246 EYIASASEDLFIDIANVQTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDD 295
Score = 35.1 bits (77), Expect = 0.046
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
V ++ F+ +GE++AS+S D I I G+ I + ++ V W+ L+ A D
Sbjct: 236 VRTISFNYSGEYIASASEDLFIDIANVQTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGD 294
Query: 268 DKTLK 282
DK K
Sbjct: 295 DKNPK 299
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 81.0 bits (191), Expect = 7e-16
Identities = 64/231 (27%), Positives = 101/231 (43%), Gaps = 22/231 (9%)
Frame = +1
Query: 46 NYTLKFTLAGHTK---AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 216
++ KF A K +++ V ++P+G L + S +W FE + H I
Sbjct: 109 SFAAKFVHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPI 168
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
+ WS + +VS D TLK W+ + H + +F S S D
Sbjct: 169 RSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDD 228
Query: 397 ESVRIWDVR--------TGKCLK----------PLPA-HSDPVSAVHFNRDGSLIVSSSY 519
+V++WD TG K P A H V +V ++ SL+VS
Sbjct: 229 TTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLLVSGGK 288
Query: 520 DGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
D L ++WDT SG+ L +L N +S VK++ NG ++L A+ D +KL+D
Sbjct: 289 DQLVKLWDTRSGRELCSLHGHKNIVLS-VKWNQNGNWLLTASKDQIIKLYD 338
Score = 79.4 bits (187), Expect = 2e-15
Identities = 47/159 (29%), Positives = 81/159 (50%), Gaps = 2/159 (1%)
Frame = +1
Query: 70 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 249
AGH V SV + P L S D+L+K+W G+ ++ GHK + V W+ +
Sbjct: 265 AGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW 324
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRT 426
+++AS D+ +K++++ + K L++ +GH+ V ++P VSGS D S+ W V
Sbjct: 325 LLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGH 384
Query: 427 GKCLKPLP-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
+P AH + V + ++ G L+ S S D + W
Sbjct: 385 ENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
Score = 75.4 bits (177), Expect = 4e-14
Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Frame = +1
Query: 196 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 375
+GH + V W L+VS D+ +K+W+ SG+ L +L GH N V +N N
Sbjct: 265 AGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW 324
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTAS 552
+++ S D+ ++++D+RT K L+ H+ V+++ ++ VS S DG W
Sbjct: 325 LLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGH 384
Query: 553 GQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSR 681
+ + + V + + P G + + + D+T K W +R
Sbjct: 385 ENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWCRNR 427
Score = 64.1 bits (149), Expect = 9e-11
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW-SSD 240
+L GH V SVK++ NG WL ++S D++IK++ K ++ GH ++ +AW
Sbjct: 305 SLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCH 364
Query: 241 SRLIVSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
VS S D ++ W + ++ H N V+ ++P L+ SGS D + + W
Sbjct: 365 EEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 79.8 bits (188), Expect = 2e-15
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
+SS+ F + ++S D I+++ KTI+ K G+ V ++S ++ +S
Sbjct: 36 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 95
Query: 268 ---DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 438
D +L++ L K L+ KGH + V + +SGS D +V +WD R KC
Sbjct: 96 NGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQ 155
Query: 439 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---ASGQCLKTLIDDDNPXVSFVK 609
L P +A D LI + ++ G R++D G + D + VK
Sbjct: 156 GLLRVQGRPAAAYD---DQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVK 212
Query: 610 FSPNGKYILAATLDNTLKLWDYSRG 684
FS +G+ +L T+D + + D RG
Sbjct: 213 FSNDGRLMLLTTMDGFIHVLDSFRG 237
Score = 53.6 bits (123), Expect = 1e-07
Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 6/188 (3%)
Frame = +1
Query: 142 DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 321
D +++ +D K+ + GH + ++ S +S S D+T+ +W+ KC L
Sbjct: 99 DDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLL 158
Query: 322 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC----LKPLPAHSDPVSAVHFNR 489
+ + LI + +F +R++D R + + + + V F+
Sbjct: 159 RVQGRPAAAYD---DQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSN 215
Query: 490 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV--KFSPNGKYILAATLDNTLK 663
DG L++ ++ DG + D+ G L T S + FSP G ++++ + D +
Sbjct: 216 DGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDGSTH 275
Query: 664 LWDYSRGK 687
W GK
Sbjct: 276 AWGVRSGK 283
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Frame = +1
Query: 352 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSS---YD 522
+F+ S +V+ S D+S+R++DV + CLK + + V V F + ++ SS +D
Sbjct: 40 DFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWD 99
Query: 523 GLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
R+ + L+ + VS + G+ ++ +LD T+ LWD KC
Sbjct: 100 DSLRLLSLHDNKYLRYFKGHHDRVVS-LSLCSGGECFISGSLDRTVLLWDQRVEKC 154
Score = 35.1 bits (77), Expect = 0.046
Identities = 42/211 (19%), Positives = 81/211 (38%), Gaps = 8/211 (3%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GH V S+ GE S S D+ + +W D + EK ++ A D LI
Sbjct: 118 GHHDRVVSLSLCSGGECFISGSLDRTVLLW---DQRVEKCQGLLRVQGRPAAAYDDQGLI 174
Query: 253 VSASDDKTLKVWE---LSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
+ + +++++ G + ++ G + F+ L++ + D + + D
Sbjct: 175 FAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDS 234
Query: 421 RTGKCLKPL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDN 588
G L P + F+ +G +VS S DG W SG+ + + +
Sbjct: 235 FRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSE 294
Query: 589 PXVSFVKFSPNGKYILAATLDNTLKLWDYSR 681
P V +K+ P + + + + D S+
Sbjct: 295 PPV--IKWGPGSPMFVTGSSELAFVIPDLSK 323
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 79.8 bits (188), Expect = 2e-15
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 6/205 (2%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
+SS+ F + ++S D I+++ KTI+ K G+ V ++S ++ +S
Sbjct: 33 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 92
Query: 268 ---DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 438
D +L++ L K L+ KGH + V + +SGS D +V +WD R KC
Sbjct: 93 NGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQ 152
Query: 439 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT---ASGQCLKTLIDDDNPXVSFVK 609
L P +A D LI + ++ G R++D G + D + VK
Sbjct: 153 GLLRVQGRPAAAYD---DQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVK 209
Query: 610 FSPNGKYILAATLDNTLKLWDYSRG 684
FS +G+ +L T+D + + D RG
Sbjct: 210 FSNDGRLMLLTTMDGFIHVLDSFRG 234
Score = 53.6 bits (123), Expect = 1e-07
Identities = 40/188 (21%), Positives = 79/188 (42%), Gaps = 6/188 (3%)
Frame = +1
Query: 142 DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 321
D +++ +D K+ + GH + ++ S +S S D+T+ +W+ KC L
Sbjct: 96 DDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLL 155
Query: 322 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC----LKPLPAHSDPVSAVHFNR 489
+ + LI + +F +R++D R + + + + V F+
Sbjct: 156 RVQGRPAAAYD---DQGLIFAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSN 212
Query: 490 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV--KFSPNGKYILAATLDNTLK 663
DG L++ ++ DG + D+ G L T S + FSP G ++++ + D +
Sbjct: 213 DGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDGSTH 272
Query: 664 LWDYSRGK 687
W GK
Sbjct: 273 AWGVRSGK 280
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Frame = +1
Query: 352 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSS---YD 522
+F+ S +V+ S D+S+R++DV + CLK + + V V F + ++ SS +D
Sbjct: 37 DFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWD 96
Query: 523 GLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
R+ + L+ + VS + G+ ++ +LD T+ LWD KC
Sbjct: 97 DSLRLLSLHDNKYLRYFKGHHDRVVS-LSLCSGGECFISGSLDRTVLLWDQRVEKC 151
Score = 35.1 bits (77), Expect = 0.046
Identities = 42/211 (19%), Positives = 81/211 (38%), Gaps = 8/211 (3%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GH V S+ GE S S D+ + +W D + EK ++ A D LI
Sbjct: 115 GHHDRVVSLSLCSGGECFISGSLDRTVLLW---DQRVEKCQGLLRVQGRPAAAYDDQGLI 171
Query: 253 VSASDDKTLKVWE---LSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
+ + +++++ G + ++ G + F+ L++ + D + + D
Sbjct: 172 FAIAFGGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDS 231
Query: 421 RTGKCLKPL---PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDN 588
G L P + F+ +G +VS S DG W SG+ + + +
Sbjct: 232 FRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSE 291
Query: 589 PXVSFVKFSPNGKYILAATLDNTLKLWDYSR 681
P V +K+ P + + + + D S+
Sbjct: 292 PPV--IKWGPGSPMFVTGSSELAFVIPDLSK 320
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 79.8 bits (188), Expect = 2e-15
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Frame = +1
Query: 28 SSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 207
SS+ + +K L GH AV +G ++ + S D+L+K+W + GH+
Sbjct: 229 SSMVQKMQNIK-RLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHE 287
Query: 208 MGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN---LI 378
I+D+A SS++ I SAS+D ++VW L G + L+GH+ V F+P+ +
Sbjct: 288 GDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQL 347
Query: 379 VSGSFDESVRIWDVR----------------TGKCLKPLPAH---SDPVSAVHFNRDGSL 501
+S S D + RIWD R GK P ++ S + FN GS+
Sbjct: 348 LSSSDDGTCRIWDARGAQFAPRIYVPRPPSPDGKNSGPSSSNAQQSHQIFCCAFNASGSV 407
Query: 502 IVSSSYDGLCRIWDTASGQCLKTLIDD 582
V+ S D L R++ S KT DD
Sbjct: 408 FVTGSSDTLARVYSVWSAN--KTNTDD 432
Score = 65.7 bits (153), Expect = 3e-11
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Frame = +1
Query: 310 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR 489
+K L+GH N V+C + +++GS D V++W + T CL H ++ + +
Sbjct: 238 IKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSS 297
Query: 490 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFS--PNGKY-ILAATLDNTL 660
+ I S+S D + R+W G + +++ V+ + FS P Y +L+++ D T
Sbjct: 298 NNIFIASASNDCVIRVWRLPDGLPV-SVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTC 356
Query: 661 KLWDYSRGKCF 693
++WD +RG F
Sbjct: 357 RIWD-ARGAQF 366
Score = 55.6 bits (128), Expect = 3e-08
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Frame = +1
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH--SNYVFCCN-FNPQSNLIV 381
G++ +AWS D+R +++A D + VW S G + +L GH S YV + FNP+ + +
Sbjct: 546 GVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPR--IAM 603
Query: 382 SGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 561
S +D +WD+ G ++ + F+ DG+ I+ S G I T G
Sbjct: 604 SAGYDGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPDGTSIILSDDVGQLYILSTGQGDS 663
Query: 562 LK 567
K
Sbjct: 664 QK 665
Score = 53.2 bits (122), Expect = 2e-07
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS---SDS 243
GH ++ + S N ++AS+S D +I++W DG + GH ++ +A+S
Sbjct: 285 GHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSP 344
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTL-------------------KGHSNYVFCCNFNPQ 366
++S+SDD T ++W+ + + S+ +FCC FN
Sbjct: 345 YQLLSSSDDGTCRIWDARGAQFAPRIYVPRPPSPDGKNSGPSSSNAQQSHQIFCCAFNAS 404
Query: 367 SNLIVSGSFDESVRIWDV----RTGKCLKPLPAHSDPVSAVHFN 486
++ V+GS D R++ V +T P H V A H N
Sbjct: 405 GSVFVTGSSDTLARVYSVWSANKTNTDDPEQPNHEMDVLAGHEN 448
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG--ISDVAWSSDSRLIV 255
+ V+ + +S + ++ ++ D I +W A DG +++GH + DV + R+ +
Sbjct: 545 RGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDV-HPFNPRIAM 603
Query: 256 SASDDKTLKVWELSSG 303
SA D VW++ G
Sbjct: 604 SAGYDGKTIVWDIWEG 619
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 79.4 bits (187), Expect = 2e-15
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSAD--KLIKIWGAYDGKFE--KTISGHKMGISDVAWSSDSRLIV 255
+ S+ PNGE A+ D + K D K T+ H ++ V W+ +SR +
Sbjct: 16 IFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKNSRYVA 75
Query: 256 SASDDKTLKVWELSSG-----------------KCLKTLKGHSNYVFCCNFNPQSNLIVS 384
S SDD+ +++ E G K + TL+GH+ V N++P +++ S
Sbjct: 76 SGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSPDDSMLAS 135
Query: 385 GSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 549
GS D +V IW++RTG C L H V V ++ GS I S S D IW T+
Sbjct: 136 GSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTS 190
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/95 (33%), Positives = 41/95 (43%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 225
N+ TL GHT V + +SP+ LAS S D + IW G + GH + V
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGV 166
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 330
W I S SDDKT+ +W S GH
Sbjct: 167 TWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)
Frame = +1
Query: 304 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW-----------------DVRTGK 432
+ L TL+ H V C + S + SGS D+ ++I DV K
Sbjct: 50 RLLATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWK 109
Query: 433 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKF 612
+ L H+ V ++++ D S++ S S D IW+ +G C T++ V V +
Sbjct: 110 AVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMC-TTVLRGHLSLVKGVTW 168
Query: 613 SPNGKYILAATLDNTLKLW 669
P G +I + + D T+ +W
Sbjct: 169 DPIGSFIASQSDDKTVIIW 187
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +1
Query: 604 VKFSPNGKYILAATLDNTLKLWDYSRGKC 690
+ +SP+ + + +LDNT+ +W+ G C
Sbjct: 124 LNWSPDDSMLASGSLDNTVHIWNMRTGMC 152
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 79.4 bits (187), Expect = 2e-15
Identities = 46/167 (27%), Positives = 89/167 (53%), Gaps = 4/167 (2%)
Frame = +1
Query: 187 KTISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 363
++ H + V ++ R +++S D T+K+W + ++T K H+ V+ +NP
Sbjct: 100 RSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNP 159
Query: 364 Q-SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRI 537
+ ++ S S D ++RIWDVR +PAH + + +N+ D ++ +SS D ++
Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKV 219
Query: 538 WDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAA-TLDNTLKLWDY 675
WD S + +++ V VKFSP+ + ++A+ + D ++ LWDY
Sbjct: 220 WDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDY 266
Score = 63.3 bits (147), Expect = 2e-10
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS- 237
T H V ++P +G+ AS+S D ++IW + I H I W+
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKY 203
Query: 238 DSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRI 411
D ++ ++S DKT+KVW++ S + L L GH V F+P + +LI S S+D SV +
Sbjct: 204 DDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCL 263
Query: 412 WDVRTGKCL-KPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 540
WD L H++ + + L+ S+ +D L +W
Sbjct: 264 WDYMVEDALVGRYDHHTEFAVGIDMSVLVEGLMASTGWDELVYVW 308
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 79.4 bits (187), Expect = 2e-15
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 402
A+SSD R + S D T+K+ + +GKCLK L GH + F+P+ S ++ SGS D
Sbjct: 110 AFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCLKTLI 576
VR+W+ +TG+C++ + P++++ F+ G L+ +S L IW G ++
Sbjct: 170 VRLWNAKTGECIRTHDFYR-PIASIAFHAGGELLAVASGHKL-HIWHYNKGGDDSAPAIV 227
Query: 577 DDDNPXVSFVKFSPNGKYIL 636
+ V F P+G +L
Sbjct: 228 LKTRRSLRAVHFHPHGVPLL 247
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW-SSDSRLIVS 258
++ + FS +G LAS+ D +KI GK K ++GH+ V + S ++ S
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS 163
Query: 259 ASDDKTLKVWELSSGKCLKT 318
S D +++W +G+C++T
Sbjct: 164 GSLDHEVRLWNAKTGECIRT 183
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 472 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN-PXVSFVKFSPNGKYILAA-T 645
A F+ DG + S+ D +I D +G+CLK L P V V+F P I+A+ +
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSEIVASGS 165
Query: 646 LDNTLKLWDYSRGKC 690
LD+ ++LW+ G+C
Sbjct: 166 LDHEVRLWNAKTGEC 180
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 79.4 bits (187), Expect = 2e-15
Identities = 44/140 (31%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDES 402
A+SSD R + S D T+K+ + +GKCLK L GH + F+P+ S ++ SGS D
Sbjct: 110 AFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCLKTLI 576
VR+W+ +TG+C++ + P++++ F+ G L+ +S L IW G ++
Sbjct: 170 VRLWNAKTGECIRTHDFYR-PIASIAFHAGGELLAVASGHKL-HIWHYNKGGDDSAPAIV 227
Query: 577 DDDNPXVSFVKFSPNGKYIL 636
+ V F P+G +L
Sbjct: 228 LKTRRSLRAVHFHPHGVPLL 247
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW-SSDSRLIVS 258
++ + FS +G LAS+ D +KI GK K ++GH+ V + S ++ S
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS 163
Query: 259 ASDDKTLKVWELSSGKCLKT 318
S D +++W +G+C++T
Sbjct: 164 GSLDHEVRLWNAKTGECIRT 183
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 472 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN-PXVSFVKFSPNGKYILAA-T 645
A F+ DG + S+ D +I D +G+CLK L P V V+F P I+A+ +
Sbjct: 108 AAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSEIVASGS 165
Query: 646 LDNTLKLWDYSRGKC 690
LD+ ++LW+ G+C
Sbjct: 166 LDHEVRLWNAKTGEC 180
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 79.0 bits (186), Expect = 3e-15
Identities = 46/124 (37%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 375
GH + D++WS D+ L+ SAS DKT+++W++ S CL H++YV FNP N
Sbjct: 326 GHTGEVLDISWSKDNYLL-SASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQFNPVNENY 383
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
+SGS D VRIW++ +G + D +SAV + DG + S +G CR ++ SG
Sbjct: 384 FMSGSIDGKVRIWNI-SGCSVVDWADLKDIISAVCYRPDGQGGIIGSLNGSCRFFN-MSG 441
Query: 556 QCLK 567
+ L+
Sbjct: 442 EFLE 445
Score = 54.4 bits (125), Expect = 7e-08
Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Frame = +1
Query: 304 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 483
K L +GH+ V +++ + N ++S S D++VR+W V + CL AH+ V++V F
Sbjct: 319 KPLYEFRGHTGEVLDISWS-KDNYLLSASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQF 376
Query: 484 NR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTL 660
N + + +S S DG RIW+ + C D +S V + P+G+ + +L+ +
Sbjct: 377 NPVNENYFMSGSIDGKVRIWNISG--CSVVDWADLKDIISAVCYRPDGQGGIIGSLNGSC 434
Query: 661 KLWDYS 678
+ ++ S
Sbjct: 435 RFFNMS 440
Score = 52.4 bits (120), Expect = 3e-07
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
+ H A+ ++KFS +G++LASS D ++++W + K + + ++++ S
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDKKSRL---RRDCLNEIDPSCMYF 273
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
+ S K + V E K ++ + S+ C F P+ I+
Sbjct: 274 EVNDLSQLKPVLVNEEKPKKTTESFRKTSDSA-CVVFPPKVFRIME-------------- 318
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV 606
K L H+ V + +++D L+ S+S D R+W S CL N V+ V
Sbjct: 319 -KPLYEFRGHTGEVLDISWSKDNYLL-SASMDKTVRLWKVGSNDCLGVFA--HNSYVTSV 374
Query: 607 KFSP-NGKYILAATLDNTLKLWDYS 678
+F+P N Y ++ ++D +++W+ S
Sbjct: 375 QFNPVNENYFMSGSIDGKVRIWNIS 399
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 79.0 bits (186), Expect = 3e-15
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 6/217 (2%)
Frame = +1
Query: 40 KPNYTLKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 210
K T+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 3 KKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKG 62
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 390
+ +++ SAS D + K+W+ +G L + + H + V C F+ + +++G
Sbjct: 63 AVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGG 121
Query: 391 FDESVRIWDVRTGKCLKPLPAHSDP--VSAVHFNRDGSLIVSSSYD-GLCRIWDTASGQC 561
F++ +R++D+ P P + + + I+SS D G R+WD SG+
Sbjct: 122 FEKILRVFDMNRLDA-PPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKI 180
Query: 562 LKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
++TL + V+ + S +G+YI A +T+K WD
Sbjct: 181 VQTL--ETKSPVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 59.7 bits (138), Expect = 2e-09
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Frame = +1
Query: 151 IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 330
+++W GK +T+ K ++ S D R I +A D T+K W+ + +K+
Sbjct: 170 VRLWDVRSGKIVQTLET-KSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYDMP 227
Query: 331 SNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV 507
N + + P+S V+G D VR++D TG+ + H PV V F G
Sbjct: 228 CN-IESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYA 286
Query: 508 SSSYDGLCRIWDT 546
S S DG RIW T
Sbjct: 287 SGSEDGTIRIWQT 299
Score = 50.8 bits (116), Expect = 9e-07
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG-ISDVAW-SSDSRL 249
H V + FS + + L + +K+++++ T G I + W SD +
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTI 160
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
+ S +D +++W++ SGK ++TL+ S V + I + +V+ WD
Sbjct: 161 LSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGRYITTAD-GSTVKFWDANHF 218
Query: 430 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVK 609
+K + SA + G V+ D R++D +G+ + P V V+
Sbjct: 219 GLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGP-VHCVR 277
Query: 610 FSPNGKYILAATLDNTLKLW 669
F+P G + + D T+++W
Sbjct: 278 FTPTGLSYASGSEDGTIRIW 297
Score = 30.7 bits (66), Expect = 0.99
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 88 VSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 264
+ S P +GE + D ++++ Y G+ GH + V ++ S S
Sbjct: 230 IESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGS 289
Query: 265 DDKTLKVWE 291
+D T+++W+
Sbjct: 290 EDGTIRIWQ 298
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 162
GH V V+F+P G AS S D I+IW
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 79.0 bits (186), Expect = 3e-15
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 6/217 (2%)
Frame = +1
Query: 40 KPNYTLKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 210
K T+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 3 KKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKG 62
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 390
+ +++ SAS D + K+W+ +G L + + H + V C F+ + +++G
Sbjct: 63 AVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGG 121
Query: 391 FDESVRIWDVRTGKCLKPLPAHSDP--VSAVHFNRDGSLIVSSSYD-GLCRIWDTASGQC 561
F++ +R++D+ P P + + + I+SS D G R+WD SG+
Sbjct: 122 FEKILRVFDMNRLDA-PPTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKI 180
Query: 562 LKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
++TL + V+ + S +G+YI A +T+K WD
Sbjct: 181 VQTL--ETKSPVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 59.7 bits (138), Expect = 2e-09
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 1/133 (0%)
Frame = +1
Query: 151 IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 330
+++W GK +T+ K ++ S D R I +A D T+K W+ + +K+
Sbjct: 170 VRLWDVRSGKIVQTLET-KSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYDMP 227
Query: 331 SNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV 507
N + + P+S V+G D VR++D TG+ + H PV V F G
Sbjct: 228 CN-IESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYA 286
Query: 508 SSSYDGLCRIWDT 546
S S DG RIW T
Sbjct: 287 SGSEDGTIRIWQT 299
Score = 50.8 bits (116), Expect = 9e-07
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG-ISDVAW-SSDSRL 249
H V + FS + + L + +K+++++ T G I + W SD +
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTI 160
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
+ S +D +++W++ SGK ++TL+ S V + I + +V+ WD
Sbjct: 161 LSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGRYITTAD-GSTVKFWDANHF 218
Query: 430 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVK 609
+K + SA + G V+ D R++D +G+ + P V V+
Sbjct: 219 GLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGP-VHCVR 277
Query: 610 FSPNGKYILAATLDNTLKLW 669
F+P G + + D T+++W
Sbjct: 278 FTPTGLSYASGSEDGTIRIW 297
Score = 30.7 bits (66), Expect = 0.99
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 88 VSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 264
+ S P +GE + D ++++ Y G+ GH + V ++ S S
Sbjct: 230 IESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGS 289
Query: 265 DDKTLKVWE 291
+D T+++W+
Sbjct: 290 EDGTIRIWQ 298
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 162
GH V V+F+P G AS S D I+IW
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 78.6 bits (185), Expect = 4e-15
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 5/205 (2%)
Frame = +1
Query: 73 GHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
GH++ V + +SP +G +L S+S D + G + T GHK + +++
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV- 420
SAS D + K+W+ +G L + + H + V C F+ + +++G F++ +R++D+
Sbjct: 74 LRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDTKYLITGGFEKILRVFDLN 132
Query: 421 RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTASGQCLKTLIDDDNPXV 597
R + + + + I+SS D G R+WD SG+ ++TL + V
Sbjct: 133 RLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKIVQTL--ETKSPV 190
Query: 598 SFVKFSPNGKYILAATLDNTLKLWD 672
+ + S +G+YI A +T+K WD
Sbjct: 191 TSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 64.9 bits (151), Expect = 5e-11
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 3/211 (1%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T GH AV S N AS+SAD K+W A G + HK + A+S D+
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDT 114
Query: 244 RLIVSASDDKTLKVWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFD-ESVRIWD 417
+ +++ +K L+V++L+ T + + + I+S D VR+WD
Sbjct: 115 KYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWD 174
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXV 597
VR+GK ++ L S PV++ ++DG I ++ + WD +K+ D +
Sbjct: 175 VRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWDANHFGLVKSY--DMPCNI 230
Query: 598 SFVKFSP-NGKYILAATLDNTLKLWDYSRGK 687
P +G +A D ++L+D+ GK
Sbjct: 231 ESASLEPKSGNKFVAGGEDMWVRLFDFHTGK 261
Score = 64.1 bits (149), Expect = 9e-11
Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = +1
Query: 151 IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 330
+++W GK +T+ K ++ S D R I +A D T+K W+ + +K+
Sbjct: 170 VRLWDVRSGKIVQTLET-KSPVTSAEVSQDGRYITTA-DGSTVKFWDANHFGLVKSYDMP 227
Query: 331 SNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV 507
N + + P+S N V+G D VR++D TGK + H PV V F G
Sbjct: 228 CN-IESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYA 286
Query: 508 SSSYDGLCRIWDT 546
S S DG RIW T
Sbjct: 287 SGSEDGTIRIWQT 299
Score = 52.0 bits (119), Expect = 4e-07
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 2/200 (1%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG-ISDVAW-SSDSRL 249
H V + FS + ++L + +K+++++ T G I + W D +
Sbjct: 101 HKHIVRACAFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTI 160
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
+ S +D +++W++ SGK ++TL+ S V + I + +V+ WD
Sbjct: 161 LSSCTDIGGVRLWDVRSGKIVQTLETKSP-VTSAEVSQDGRYITTAD-GSTVKFWDANHF 218
Query: 430 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVK 609
+K + SA + G+ V+ D R++D +G+ + P V V+
Sbjct: 219 GLVKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGP-VHCVR 277
Query: 610 FSPNGKYILAATLDNTLKLW 669
F+P G+ + + D T+++W
Sbjct: 278 FAPTGESYASGSEDGTIRIW 297
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 162
GH V V+F+P GE AS S D I+IW
Sbjct: 268 GHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 88 VSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 264
+ S P +G + D ++++ + GK GH + V ++ S S
Sbjct: 230 IESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGS 289
Query: 265 DDKTLKVWE 291
+D T+++W+
Sbjct: 290 EDGTIRIWQ 298
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 78.2 bits (184), Expect = 5e-15
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 3/202 (1%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSS-DSR 246
G + ++ S +G+ L + S + K+W + + GHK ++DV +SS D
Sbjct: 61 GDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDE 120
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
+ +AS D+T K+W+ + G L+T K S FD R+WD+RT
Sbjct: 121 CLATASTDRTEKIWK-TDGTLLQTFK------------------ASSGFDSLARVWDLRT 161
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFV 606
+ + H V +V F+ +G + S D CRIWD + L + N VS V
Sbjct: 162 ARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVN-LVSQV 220
Query: 607 KFSPNGKYILA-ATLDNTLKLW 669
K+ P +Y LA A+ D + +W
Sbjct: 221 KYEPQERYFLATASHDMNVNIW 242
Score = 71.7 bits (168), Expect = 4e-13
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Frame = +1
Query: 43 PNYTLKFT-LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 216
P T K L GH + V+ V FS + E LA++S D+ KIW DG +T
Sbjct: 93 PQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKT-DGTLLQTFKA----- 146
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
S+ D +VW+L + + + +GH V +F+P + SG D
Sbjct: 147 -------------SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGED 193
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
RIWD+R K L +PAH + VS V + ++ + ++S+D IW +K+L
Sbjct: 194 NQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSL 253
Query: 574 IDDDNPXVS 600
+ ++ S
Sbjct: 254 VGHESKVAS 262
Score = 58.4 bits (135), Expect = 4e-09
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Frame = +1
Query: 127 ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 306
ASS D L ++W + GH + V +S + + S +D ++W+L K
Sbjct: 146 ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRK 205
Query: 307 CLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHF 483
L + H N V + PQ + + S D +V IW R +K L H V+++
Sbjct: 206 LLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDI 265
Query: 484 NRDGS 498
D S
Sbjct: 266 AVDSS 270
Score = 46.0 bits (104), Expect = 2e-05
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 2/160 (1%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNP-QSN 372
G ++ + S D +++V+ S K+WE+ + LKGH +V F+
Sbjct: 61 GDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDE 120
Query: 373 LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
+ + S D + +IW G L+ A SS +D L R+WD +
Sbjct: 121 CLATASTDRTEKIWKT-DGTLLQTFKA------------------SSGFDSLARVWDLRT 161
Query: 553 GQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ + + V V FSPNG ++ + DN ++WD
Sbjct: 162 ARNI-LIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWD 200
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTISGH--KMGISDV 225
L + + H VS VK+ P + LA++S D + IW D K++ GH K+ D+
Sbjct: 206 LLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDI 265
Query: 226 AWSSDSR 246
A S SR
Sbjct: 266 AVDSSSR 272
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 77.8 bits (183), Expect = 7e-15
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L H + SP ++LA++S+DK +KIW K EK ++GH+ + D +S D
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGE 266
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 351
+V+AS D T ++W + +GK +K +GH CC
Sbjct: 267 FLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCC 301
Score = 73.7 bits (173), Expect = 1e-13
Identities = 47/190 (24%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 303
LA++S D I+ W A G+ +TI ++ + + D + +A + +++++++S
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAACNPH-IRLFDVNSN 66
Query: 304 --KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 477
+ + T H+N V F + + SGS D +V+IWD+R C K + + V+ V
Sbjct: 67 SPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVA-AVNTV 125
Query: 478 HFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNT 657
+ + + ++S +G R+WD + C L+ + + V + +G ++AA T
Sbjct: 126 VLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGT 185
Query: 658 LKLWDYSRGK 687
+W RGK
Sbjct: 186 CYVWRLLRGK 195
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/155 (24%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Frame = +1
Query: 232 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
S S ++ +AS D T++ WE +G+C +T++ ++V P + + + + + +R+
Sbjct: 2 SQPSVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYL-AAACNPHIRL 60
Query: 412 WDVRTG--KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 585
+DV + + + +H++ V AV F D + S S DG +IWD + C K +
Sbjct: 61 FDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEY--ES 118
Query: 586 NPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
V+ V PN +++ + +++WD C
Sbjct: 119 VAAVNTVVLHPNQTELISGDQNGNIRVWDLRANSC 153
Score = 66.1 bits (154), Expect = 2e-11
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 8/169 (4%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAWSSDSRLIVSA 261
AV++V PN L S + I++W + + + + D ++V+A
Sbjct: 121 AVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAA 180
Query: 262 SDDKTLKVWELSSGKCLKT-------LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
++ T VW L GK T L+ H+ ++ C +P + + + S D++V+IW+V
Sbjct: 181 NNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWNV 240
Query: 421 RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 567
K K L H V F+ DG +V++S D R+W +G+ +K
Sbjct: 241 DGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVK 289
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/88 (30%), Positives = 44/88 (50%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 372
+ H I S ++ + +AS DKT+K+W + K K L GH +V+ C F+
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGE 266
Query: 373 LIVSGSFDESVRIWDVRTGKCLKPLPAH 456
+V+ S D + R+W + GK +K H
Sbjct: 267 FLVTASSDMTARLWSMPAGKEVKVYQGH 294
Score = 58.4 bits (135), Expect = 4e-09
Identities = 46/216 (21%), Positives = 89/216 (41%), Gaps = 8/216 (3%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T HT V +V F + +W+ S S D +KIW +K ++ V +
Sbjct: 73 TYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHPNQ 131
Query: 244 RLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
++S + ++VW+L + C + + V ++V+ + + +W +
Sbjct: 132 TELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRL 191
Query: 421 RTGK-------CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
GK L L AH+ + + + ++S D +IW+ G L+ ++
Sbjct: 192 LRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTVKIWN-VDGFKLEKVLT 250
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
V FS +G++++ A+ D T +LW GK
Sbjct: 251 GHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGK 286
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 49 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 204
+ L+ L GH + V FS +GE+L ++S+D ++W GK K GH
Sbjct: 243 FKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 76.6 bits (180), Expect = 2e-14
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 15/222 (6%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
TL GHT V S+ ++P + S+S D + +W A + I + A+S +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 244 RLIVSASDDKTLKVWELSSG-------KCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDE 399
+ + D ++ LSS + L GH YV CC + P + +++ S D+
Sbjct: 120 QSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQ 179
Query: 400 SVRIWDVRTGKCLKPL-----PAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDT-ASGQ 558
+ +WDV TG H+ V +V + + + +S S D R+WDT A+ +
Sbjct: 180 TCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASR 239
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
++T + V+ VKF P+G + D T +L+D G
Sbjct: 240 AVRTFHGHEG-DVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Score = 75.4 bits (177), Expect = 4e-14
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 13/177 (7%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTI-----SGHKMGISDVA 228
L GH VS ++ PN + L +SS D+ +W G SGH + V+
Sbjct: 152 LTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVS 211
Query: 229 WS-SDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
S S+ +S S D T ++W+ ++ + ++T GH V F P +GS D +
Sbjct: 212 ISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGT 271
Query: 403 VRIWDVRTGKCLKPLPAHSD----PVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQ 558
R++D+RTG L+ H D PV+++ F+ G L+ + + + C +WDT G+
Sbjct: 272 CRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGE 328
Score = 62.5 bits (145), Expect = 3e-10
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 16/187 (8%)
Frame = +1
Query: 160 WGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY 339
+GA D +T+ GH + + W+ + IVSAS D L VW + + +K +
Sbjct: 50 FGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW 109
Query: 340 VFCCNFNPQSNLIVSGSFDESVRIWDVR-------TGKCLKPLPAHSDPVSAVHF--NRD 492
V C F+P + G D I+ + T + L H VS + N D
Sbjct: 110 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNED 169
Query: 493 GSLIVSSSYDGLCRIWDTASGQCLKTLI------DDDNPXVSFVKFS-PNGKYILAATLD 651
LI SS D C +WD +G LKT + V V S N + ++ + D
Sbjct: 170 AHLITSSG-DQTCILWDVTTG--LKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCD 226
Query: 652 NTLKLWD 672
+T +LWD
Sbjct: 227 STARLWD 233
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Frame = +1
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
SA+ +T + + C +TL+GH+ V+ ++ P+ N IVS S D + +W+ T +
Sbjct: 40 SAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK 99
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-----GQC-LKTLIDDDNPXV 597
+ V F+ +G + D +C I+ +S G + ++ V
Sbjct: 100 THAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYV 159
Query: 598 SFVKFSPN-GKYILAATLDNTLKLWDYSRG 684
S ++ PN +++ ++ D T LWD + G
Sbjct: 160 SCCQYVPNEDAHLITSSGDQTCILWDVTTG 189
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 76.2 bits (179), Expect = 2e-14
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD-SRLIVSA- 261
+ SV F + L +SS D ++++ + K K K G V ++ S LI S+
Sbjct: 27 IHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLKITYHKKHGTDRVCFTHHPSSLICSSR 86
Query: 262 ----SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
S ++L+ + + L+ KGH + V +P ++ +SGS D SVR+WD+R
Sbjct: 87 YNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVN 146
Query: 430 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA---SGQCLKTLIDDDNPXVS 600
C L P AV +++ G + + G +++D+ G L+ D V+
Sbjct: 147 ACQGILHLRGRP--AVAYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVN 204
Query: 601 FVKFSPNGKYILAATLDNTLKLWDYSRGK 687
+KFS +GK +L T +N + + D RG+
Sbjct: 205 DIKFSNDGKSMLLTTTNNNIYVLDAYRGE 233
Score = 44.4 bits (100), Expect = 8e-05
Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 9/188 (4%)
Frame = +1
Query: 136 SADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 315
S + ++ YD + + GHK + + S + +S S D+++++W+L C
Sbjct: 91 STGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNACQG 150
Query: 316 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLP-------AHSDPVSA 474
L H ++ Q + +V+++D R C P + V+
Sbjct: 151 IL--HLRGRPAVAYDQQGLVFAIAMEGGAVKLFDSR---CYDKGPFDTFLVGGDTAEVND 205
Query: 475 VHFNRDGSLIVSSSYDGLCRIWDTASGQ--CLKTLIDDDNPXVSFVKFSPNGKYILAATL 648
+ F+ DG ++ ++ + + D G+ C +L + F+P+GKY+L+ +
Sbjct: 206 IKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIE-ATFTPDGKYVLSGSG 264
Query: 649 DNTLKLWD 672
D TL W+
Sbjct: 265 DGTLHAWN 272
Score = 37.5 bits (83), Expect = 0.009
Identities = 45/206 (21%), Positives = 84/206 (40%), Gaps = 7/206 (3%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GH V S+ SP + S S D+ +++W + + H G VA+ +
Sbjct: 112 GHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNACQGIL--HLRGRPAVAYDQQGLVF 169
Query: 253 VSASDDKTLKVWE---LSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
A + +K+++ G L G + V F+ ++ + + ++ + D
Sbjct: 170 AIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDA 229
Query: 421 RTG--KCLKPL-PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 591
G KC L P+ P+ A F DG ++S S DG W+ + + +++
Sbjct: 230 YRGEKKCGFSLEPSQGTPIEAT-FTPDGKYVLSGSGDGTLHAWNIENPSEVARW-ENNIG 287
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLW 669
VS +K++P +AA+ L W
Sbjct: 288 VVSCLKWAPRRAMFVAAS--TVLTFW 311
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 76.2 bits (179), Expect = 2e-14
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 5/205 (2%)
Frame = +1
Query: 73 GHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
GH++ V V +SP +G +L S+S D + G + T GHK + + ++
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV- 420
SAS D T K+W +G L + + H + V C F+ ++ +++G ++ +RI+D+
Sbjct: 69 IRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFSEDTHRLLTGGMEKILRIFDLN 127
Query: 421 RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTASGQCLKTLIDDDNPXV 597
R K + + V + + I+SS D G R+WD S + + TL + V
Sbjct: 128 RPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTL--ETKSPV 185
Query: 598 SFVKFSPNGKYILAATLDNTLKLWD 672
+ + S +G+YI A +++K WD
Sbjct: 186 TSAEVSQDGRYITTAD-GSSVKFWD 209
Score = 65.7 bits (153), Expect = 3e-11
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 3/211 (1%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T GH AV S N AS+SAD KIW A G E HK + A+S D+
Sbjct: 51 TFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGD-ELHSFEHKHIVRACAFSEDT 109
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHS-NYVFCCNFNPQSNLIVSGSFDE-SVRIWD 417
+++ +K L++++L+ G+S + + N I+S D +R+WD
Sbjct: 110 HRLLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWD 169
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXV 597
+R+ K + L S PV++ ++DG I ++ + + WD + LK+ D V
Sbjct: 170 IRSDKIVHTLETKS-PVTSAEVSQDGRYITTADGSSV-KFWDAKNFGLLKSY--DMPCNV 225
Query: 598 SFVKFSP-NGKYILAATLDNTLKLWDYSRGK 687
P +G +A D + +D+ G+
Sbjct: 226 ESASLEPKHGNTFIAGGEDMWVHRFDFQTGE 256
Score = 57.2 bits (132), Expect = 1e-08
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 4/167 (2%)
Frame = +1
Query: 199 GHKMGISDVAWSS---DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 369
GH + DVA+S D ++SAS D + +G + T +GH V+ C+ + +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68
Query: 370 NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 549
S S D + +IW+ TG L H V A F+ D +++ + + RI+D
Sbjct: 69 IRAASASADFTAKIWNALTGDELHSF-EHKHIVRACAFSEDTHRLLTGGMEKILRIFDLN 127
Query: 550 SGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLD-NTLKLWDYSRGK 687
+ + + V++ + IL++ D ++LWD K
Sbjct: 128 RPDAPPKEVGNSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDK 174
Score = 52.8 bits (121), Expect = 2e-07
Identities = 44/200 (22%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG-ISDVAW-SSDSRL 249
H V + FS + L + +K+++I+ G+ G I V W SD+ +
Sbjct: 96 HKHIVRACAFSEDTHRLLTGGMEKILRIFDLNRPDAPPKEVGNSPGSIRTVEWLHSDNTI 155
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
+ S +D +++W++ S K + TL+ S V + I + SV+ WD +
Sbjct: 156 LSSCTDTGDIRLWDIRSDKIVHTLETKSP-VTSAEVSQDGRYITTAD-GSSVKFWDAKNF 213
Query: 430 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVK 609
LK + SA + G+ ++ D +D +G+ + P V V+
Sbjct: 214 GLLKSYDMPCNVESASLEPKHGNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGP-VHCVR 272
Query: 610 FSPNGKYILAATLDNTLKLW 669
++P G+ + + D T+++W
Sbjct: 273 YAPGGESYTSGSEDGTVRIW 292
Score = 52.0 bits (119), Expect = 4e-07
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKL-IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 261
++ +V++ + + SS D I++W K T+ K ++ S D R I +A
Sbjct: 142 SIRTVEWLHSDNTILSSCTDTGDIRLWDIRSDKIVHTLET-KSPVTSAEVSQDGRYITTA 200
Query: 262 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCL 438
D ++K W+ + LK+ N V + P+ N ++G D V +D +TG+ +
Sbjct: 201 -DGSSVKFWDAKNFGLLKSYDMPCN-VESASLEPKHGNTFIAGGEDMWVHRFDFQTGEEI 258
Query: 439 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
H PV V + G S S DG RIW S
Sbjct: 259 GCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGS 296
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTISGH-KMGISDVAWSSDS 243
GH V V+++P GE S S D ++IW G+ + E +SGH K+ +V ++S
Sbjct: 263 GHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGHVKLVAEEVVRKAES 322
Query: 244 -RLIVSASDDK 273
R+ A++ K
Sbjct: 323 LRISEKAAEAK 333
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 74.9 bits (176), Expect = 5e-14
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 11/212 (5%)
Frame = +1
Query: 79 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--------KMGISDVAWS 234
+ + S+ F + ++ A++ K IKI+ ++ F +++ H + +S V W+
Sbjct: 704 SNVICSLGFDRDEDYFATAGVSKKIKIY-EFNSLFNESVDIHYPAIEMPNRSKLSGVCWN 762
Query: 235 SDSRLIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVR 408
+ R +++SD D +K+W++++G+ + H + +F+ + SGS D SV+
Sbjct: 763 NYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVK 822
Query: 409 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDD 585
+W++ CL + ++ V V F+ S L+ S D +D + + ++
Sbjct: 823 LWNINERNCLGTIRNIAN-VCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGH 881
Query: 586 NPXVSFVKFSPNGKYILAATLDNTLKLWDYSR 681
N VS+ KF N + A+T DNTLKLWD +
Sbjct: 882 NKAVSYAKFLDNETLVTAST-DNTLKLWDLKK 912
Score = 43.2 bits (97), Expect = 2e-04
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 14/156 (8%)
Frame = +1
Query: 88 VSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKT----ISGHKMGISDVAWSSDSRLI 252
V V+FSP + LA S+D + + YD + +T +SGH +S A D+ +
Sbjct: 841 VCCVQFSPQSSHLLAFGSSD--FRTY-CYDLRNLRTPWCILSGHNKAVS-YAKFLDNETL 896
Query: 253 VSASDDKTLKVWE--------LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 408
V+AS D TLK+W+ LS+ C T GH+N + I GS V
Sbjct: 897 VTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSDGYIACGSETNEVY 956
Query: 409 IWDVRTGKCLKPLPAHS-DPVSAVHFNRDGSLIVSS 513
+ + S DP+S D +L VSS
Sbjct: 957 AYHRSLPMPITSYKFGSIDPISGKEIEEDNNLFVSS 992
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +1
Query: 502 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDN-TLKLWDYS 678
+ SS YDG+ ++WD +GQ + I+ + S V FS LA+ D+ ++KLW+ +
Sbjct: 769 LASSDYDGIVKLWDVTTGQAISHFIEHEKRAWS-VDFSEACPTKLASGSDDCSVKLWNIN 827
Query: 679 RGKCFEDI 702
C I
Sbjct: 828 ERNCLGTI 835
Score = 34.3 bits (75), Expect = 0.080
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 162
L+GH KAVS KF N E L ++S D +K+W
Sbjct: 878 LSGHNKAVSYAKFLDN-ETLVTASTDNTLKLW 908
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWEL 294
+S V W S ++VSAS + ++KV +L
Sbjct: 990 VSSVCWRKRSNMVVSASSNGSIKVLQL 1016
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 74.9 bits (176), Expect = 5e-14
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 375
GH I D++WS L+ S+S D+T+++W + +CL+T H+N+V C FNP N
Sbjct: 320 GHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
+SGS D VRIWDV + + D V+AV + D V S G CR +
Sbjct: 378 FISGSIDGKVRIWDVTRCRVVDYTDIR-DIVTAVCYRPDAKGAVIGSMTGNCRFYHIFEN 436
Query: 556 Q 558
Q
Sbjct: 437 Q 437
Score = 65.3 bits (152), Expect = 4e-11
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 21/221 (9%)
Frame = +1
Query: 70 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI------SGHKMGISDVAW 231
+ H ++ ++KFSP+G+++AS+ D ++++W + + T SG G++ +
Sbjct: 215 SAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQ 274
Query: 232 SSDSRL----------IVSASDDKTLKVWELS----SGKCLKTLKGHSNYVFCCNFNPQS 369
++ + S D T V + S K L KGH + +++ +
Sbjct: 275 IEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSWS-EK 333
Query: 370 NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDT 546
++S S DE+VR+W V +CL+ H++ V+ V FN D + +S S DG RIWD
Sbjct: 334 GYLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392
Query: 547 ASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+C D V+ V + P+ K + ++ + +
Sbjct: 393 T--RCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFY 431
Score = 42.7 bits (96), Expect = 2e-04
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 21/187 (11%)
Frame = +1
Query: 184 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT---LKGHSNYVFCCN 354
++ S H I + +S D + I SA +D ++VW ++ + T + S F N
Sbjct: 211 DQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMN 270
Query: 355 FNPQ--------------SNLIVSGSFDESVRIWDVRTGKCLKPL---PAHSDPVSAVHF 483
Q S+ + S V + KPL H + + +
Sbjct: 271 QRSQIEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSW 330
Query: 484 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSP-NGKYILAATLDNTL 660
+ G L+ SSS D R+W +CL+T N V+ V F+P + Y ++ ++D +
Sbjct: 331 SEKGYLL-SSSVDETVRLWRVGCDECLRTF--THNNFVTCVAFNPVDDNYFISGSIDGKV 387
Query: 661 KLWDYSR 681
++WD +R
Sbjct: 388 RIWDVTR 394
Score = 42.7 bits (96), Expect = 2e-04
Identities = 42/215 (19%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRL 249
GH + + +S G +L SSS D+ +++W + +T + H ++ VA++ D
Sbjct: 320 GHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
+S S D +++W+++ + + C + P + V GS + R + +
Sbjct: 378 FISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVC-YRPDAKGAVIGSMTGNCRFYHIFEN 436
Query: 430 KCL--KPLPAH------SDPVSAVHF---NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 576
+ + + H S +S + + + D ++ +S D RI G+ + +
Sbjct: 437 QLQMDQEINVHGKKKVASKRISGLQYLPSDSDSDKVMVTSADSQIRI---ICGEDVICKL 493
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSR 681
+ + F +GK+I++ + D+ + +W YS+
Sbjct: 494 KASSLRTTSASFISDGKHIISTSEDSYINVWSYSQ 528
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 550 SGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
S C+ + + +KFSP+GKYI +A D +++W
Sbjct: 206 SSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +1
Query: 289 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
ELSS + H + F+P I S D VR+W +
Sbjct: 204 ELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 74.9 bits (176), Expect = 5e-14
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 375
GH I D++WS L+ S+S D+T+++W + +CL+T H+N+V C FNP N
Sbjct: 320 GHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
+SGS D VRIWDV + + D V+AV + D V S G CR +
Sbjct: 378 FISGSIDGKVRIWDVTRCRVVDYTDIR-DIVTAVCYRPDAKGAVIGSMTGNCRFYHIFEN 436
Query: 556 Q 558
Q
Sbjct: 437 Q 437
Score = 65.3 bits (152), Expect = 4e-11
Identities = 54/221 (24%), Positives = 102/221 (46%), Gaps = 21/221 (9%)
Frame = +1
Query: 70 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI------SGHKMGISDVAW 231
+ H ++ ++KFSP+G+++AS+ D ++++W + + T SG G++ +
Sbjct: 215 SAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMNQRSQ 274
Query: 232 SSDSRL----------IVSASDDKTLKVWELS----SGKCLKTLKGHSNYVFCCNFNPQS 369
++ + S D T V + S K L KGH + +++ +
Sbjct: 275 IEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSWS-EK 333
Query: 370 NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDT 546
++S S DE+VR+W V +CL+ H++ V+ V FN D + +S S DG RIWD
Sbjct: 334 GYLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392
Query: 547 ASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+C D V+ V + P+ K + ++ + +
Sbjct: 393 T--RCRVVDYTDIRDIVTAVCYRPDAKGAVIGSMTGNCRFY 431
Score = 42.7 bits (96), Expect = 2e-04
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 21/187 (11%)
Frame = +1
Query: 184 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT---LKGHSNYVFCCN 354
++ S H I + +S D + I SA +D ++VW ++ + T + S F N
Sbjct: 211 DQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVAEVDSGVYFGMN 270
Query: 355 FNPQ--------------SNLIVSGSFDESVRIWDVRTGKCLKPL---PAHSDPVSAVHF 483
Q S+ + S V + KPL H + + +
Sbjct: 271 QRSQIEPLKINNEKTEKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSW 330
Query: 484 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSP-NGKYILAATLDNTL 660
+ G L+ SSS D R+W +CL+T N V+ V F+P + Y ++ ++D +
Sbjct: 331 SEKGYLL-SSSVDETVRLWRVGCDECLRTF--THNNFVTCVAFNPVDDNYFISGSIDGKV 387
Query: 661 KLWDYSR 681
++WD +R
Sbjct: 388 RIWDVTR 394
Score = 42.7 bits (96), Expect = 2e-04
Identities = 42/215 (19%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRL 249
GH + + +S G +L SSS D+ +++W + +T + H ++ VA++ D
Sbjct: 320 GHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
+S S D +++W+++ + + C + P + V GS + R + +
Sbjct: 378 FISGSIDGKVRIWDVTRCRVVDYTDIRDIVTAVC-YRPDAKGAVIGSMTGNCRFYHIFEN 436
Query: 430 KCL--KPLPAH------SDPVSAVHF---NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 576
+ + + H S +S + + + D ++ +S D RI G+ + +
Sbjct: 437 QLQMDQEINVHGKKKVASKRISGLQYLPSDSDSDKVMVTSADSQIRI---ICGEDVICKL 493
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSR 681
+ + F +GK+I++ + D+ + +W YS+
Sbjct: 494 KASSLRTTSASFISDGKHIISTSEDSYINVWSYSQ 528
Score = 31.1 bits (67), Expect = 0.75
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 550 SGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
S C+ + + +KFSP+GKYI +A D +++W
Sbjct: 206 SSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +1
Query: 289 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
ELSS + H + F+P I S D VR+W +
Sbjct: 204 ELSSMCIDQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 74.1 bits (174), Expect = 8e-14
Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 16/177 (9%)
Frame = +1
Query: 58 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----FEKTISGHKMGISDV 225
K ++ H AV+++ S NG + + SAD+ I++W G+ T+ HK ++ +
Sbjct: 228 KESIKAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNAL 286
Query: 226 AWSSDSRLIVSASDDKTLKVWE---LSSGKCLK-TLKGHSNYVFCCNFNPQSNLIVSGSF 393
A + D ++ S S D+++ VWE S+ ++ L+GH + FN S+L++SGS
Sbjct: 287 ALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FN-VSDLLLSGSA 344
Query: 394 DESVRIW---DVRTGKCLKPLPAHSDPVSAVHFNRDGSL-----IVSSSYDGLCRIW 540
D +VRIW + CL+ L H+ PV ++ R+ L I+S S DG + W
Sbjct: 345 DRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVKCW 401
Score = 65.7 bits (153), Expect = 3e-11
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Frame = +1
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
I S S DKTLK+W S +C +++K H + V + + + +GS D +R+W TG
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVS-TNGTVYTGSADRRIRVWAKPTG 266
Query: 430 K----CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLK-TLIDDD 585
+ + L H V+A+ N DGS++ S S D +W DT++ ++ L D
Sbjct: 267 EKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHD 326
Query: 586 NPXVSFVKFSPNGKYILAATLDNTLKLW 669
+S S +L+ + D T+++W
Sbjct: 327 KAILSLFNVS---DLLLSGSADRTVRIW 351
Score = 58.8 bits (136), Expect = 3e-09
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Frame = +1
Query: 49 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVA 228
+TL TL H AV+++ + +G L S S D+ I +W D + G G
Sbjct: 270 HTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAI 329
Query: 229 WS--SDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNPQSNL-----I 378
S + S L++S S D+T+++W SS CL+ L GH+ V + L I
Sbjct: 330 LSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSI 389
Query: 379 VSGSFDESVRIWDVRTGK 432
+SGS D V+ W V K
Sbjct: 390 ISGSLDGEVKCWKVSVTK 407
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/102 (23%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Frame = +1
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
I S S+D++++IW +C + + AH D V+A+ + +G+ + + S D R+W +G
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTG 266
Query: 556 QCLKTLI---DDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ TL+ + V+ + + +G + + + D ++ +W+
Sbjct: 267 EKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWE 308
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 375
GH I D++WS ++RL+ SAS D ++++W++ CL + H+NYV FNP +
Sbjct: 354 GHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDH 411
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
+SGS D VRIW + + A V+AV + DG ++ + CR ++ SG
Sbjct: 412 FISGSIDGKVRIWSASQCQVVDWADARG-IVTAVCYQPDGQAVIIGTLTSDCRFYN-VSG 469
Query: 556 QCLK 567
CL+
Sbjct: 470 HCLQ 473
Score = 70.5 bits (165), Expect = 1e-12
Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 22/232 (9%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS----DVAWS 234
+ H A+ ++KFSP+G +LAS+ D ++++W + + + K+ S +V+
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEEHDVPKIDPSCIYFEVSKL 306
Query: 235 SDSRLIVSASDDKT---LKVWELSSGKC--------------LKTLKGHSNYVFCCNFNP 363
S+ R + D T + + + C L GHS + +++
Sbjct: 307 SELRPVAVEKDGITGSLMSPRKTTESACVIIPPKIFRVLDKPLHEFLGHSGDILDISWS- 365
Query: 364 QSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIW 540
++N ++S S D SVR+W + CL + +H++ V++V FN D +S S DG RIW
Sbjct: 366 KNNRLLSASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIW 424
Query: 541 DTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFE 696
++ QC D V+ V + P+G+ ++ TL + + ++ S G C +
Sbjct: 425 --SASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNVS-GHCLQ 473
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 73.3 bits (172), Expect = 1e-13
Identities = 42/124 (33%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 375
GH I D++WS ++RL+ SAS D ++++W++ CL + H+NYV FNP +
Sbjct: 354 GHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDH 411
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
+SGS D VRIW + + A V+AV + DG ++ + CR ++ SG
Sbjct: 412 FISGSIDGKVRIWSASQCQVVDWADARG-IVTAVCYQPDGQAVIIGTLTSDCRFYN-VSG 469
Query: 556 QCLK 567
CL+
Sbjct: 470 HCLQ 473
Score = 70.5 bits (165), Expect = 1e-12
Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 22/232 (9%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS----DVAWS 234
+ H A+ ++KFSP+G +LAS+ D ++++W + + + K+ S +V+
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVEDERCEEHDVPKIDPSCIYFEVSKL 306
Query: 235 SDSRLIVSASDDKT---LKVWELSSGKC--------------LKTLKGHSNYVFCCNFNP 363
S+ R + D T + + + C L GHS + +++
Sbjct: 307 SELRPVAVEKDGITGSLMSPRKTTESACVIIPPKIFRVLDKPLHEFLGHSGDILDISWS- 365
Query: 364 QSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIW 540
++N ++S S D SVR+W + CL + +H++ V++V FN D +S S DG RIW
Sbjct: 366 KNNRLLSASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIW 424
Query: 541 DTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFE 696
++ QC D V+ V + P+G+ ++ TL + + ++ S G C +
Sbjct: 425 --SASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNVS-GHCLQ 473
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Frame = +1
Query: 19 SNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG------K 180
S ++ P+ + + +L H AV++++FSP+GE LAS + + IW + K
Sbjct: 44 SGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWK 103
Query: 181 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 360
K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV ++
Sbjct: 104 VHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWD 163
Query: 361 PQSNLIVSGSFDESVRIW 414
P + + S S D + RI+
Sbjct: 164 PLAKYVASLSSDRTCRIY 181
Score = 71.7 bits (168), Expect = 4e-13
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG---------HKMGISDVAWS 234
K V +V F P LA++ AD IK+W G+ EK + H ++ + +S
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFS 73
Query: 235 SDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
L+ S +D L +W+L S K K+L H V ++P ++SGS D
Sbjct: 74 PSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVD 133
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
S IWDV G + L AH V V ++ + S S D CRI+
Sbjct: 134 NSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Frame = +1
Query: 340 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPA---------HSDPVSAVHFNRD 492
V +F+P S L+ + D +++W + +G+ K +P+ H V+ + F+
Sbjct: 16 VLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPS 75
Query: 493 GSLIVSSSYDGLCRIW-----DTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNT 657
G L+ S + G IW +T + + V +++SP+ Y+++ ++DN+
Sbjct: 76 GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 135
Query: 658 LKLWDYSRG 684
+WD ++G
Sbjct: 136 CIIWDVNKG 144
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Frame = +1
Query: 19 SNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG------K 180
S ++ P+ + + +L H AV++++FSP+GE LAS + + IW + K
Sbjct: 44 SGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWK 103
Query: 181 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 360
K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV ++
Sbjct: 104 VHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWD 163
Query: 361 PQSNLIVSGSFDESVRIW 414
P + + S S D + RI+
Sbjct: 164 PLAKYVASLSSDRTCRIY 181
Score = 71.7 bits (168), Expect = 4e-13
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG---------HKMGISDVAWS 234
K V +V F P LA++ AD IK+W G+ EK + H ++ + +S
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFS 73
Query: 235 SDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
L+ S +D L +W+L S K K+L H V ++P ++SGS D
Sbjct: 74 PSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVD 133
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
S IWDV G + L AH V V ++ + S S D CRI+
Sbjct: 134 NSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Frame = +1
Query: 340 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPA---------HSDPVSAVHFNRD 492
V +F+P S L+ + D +++W + +G+ K +P+ H V+ + F+
Sbjct: 16 VLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPS 75
Query: 493 GSLIVSSSYDGLCRIW-----DTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNT 657
G L+ S + G IW +T + + V +++SP+ Y+++ ++DN+
Sbjct: 76 GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 135
Query: 658 LKLWDYSRG 684
+WD ++G
Sbjct: 136 CIIWDVNKG 144
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 72.5 bits (170), Expect = 2e-13
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Frame = +1
Query: 13 PQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAY--DGKF 183
P+ + P+ + +L GHTKAV+++ +S + LAS+ D + +W + D K
Sbjct: 139 PKGSSLQTEMPS-RMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKK 197
Query: 184 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 363
+ H + DV WS ++S D T +++++ G ++ K V F+P
Sbjct: 198 VRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFK-EDEVVGVVKFHP 256
Query: 364 QS-NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSS 516
+ N+ +SG S+R+WD+R K + P+ V F G +SSS
Sbjct: 257 DNCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSS 308
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +1
Query: 313 KTLKGH--SNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 486
K +GH + + CNF+P + SGS D SV ++D ++ +K L A+ P V ++
Sbjct: 378 KRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYH 437
Query: 487 RD-GSLIVSSSYDGLCRIWD 543
+++ + S++G +++
Sbjct: 438 PVLPNVVAACSWNGQVSVFE 457
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 72.1 bits (169), Expect = 3e-13
Identities = 58/219 (26%), Positives = 108/219 (49%), Gaps = 9/219 (4%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKMG 213
P+ T++ +A H V V+FS +G++LA++S+D IW D + + T+ H+
Sbjct: 213 PSETVQILVA-HKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNP 271
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVF---CCNFNPQSNLIVS 384
+S V+WS D +++ + + LK+W++ +G L+ G++N F C + P S +V
Sbjct: 272 VSFVSWSPDDTKLLTCGNAEVLKLWDVDTG-VLRHTFGNNNTGFTVSSCAWFPDSTRLVC 330
Query: 385 GSFD--ESVRIWDVRTGKCLKPLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
GS D + +WD G +K P V + DG +++ D RI + +
Sbjct: 331 GSSDPERGIVMWDT-DGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETK 389
Query: 556 QCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
++ +I ++ P S + S +GK+ + + LWD
Sbjct: 390 --VERVISEEQPITS-LSISGDGKFFIVNLSCQEIHLWD 425
Score = 63.3 bits (147), Expect = 2e-10
Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
V + +P+GE + + +DK I+I + K E+ IS + I+ ++ S D + +
Sbjct: 360 VVDLAVTPDGESMITVFSDKEIRILNL-ETKVERVIS-EEQPITSLSISGDGKFFIVNLS 417
Query: 268 DKTLKVWELSSGKCLKTLK--GH--SNYVF-CCNFNPQSNLIVSGSFDESVRIWDVRTGK 432
+ + +W+L+ G+ + LK GH S YV C S+ I SGS D V IW+++ K
Sbjct: 418 CQEIHLWDLA-GEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTK 476
Query: 433 CLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 540
L+ L HS V+ V +N ++ ++ S+S D RIW
Sbjct: 477 PLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 63.3 bits (147), Expect = 2e-10
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEKTISGHKMG---ISDVAWSSDSRLIV 255
++S+ S +G++ + + + I +W A + K SGH+ I DS I
Sbjct: 400 ITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIA 459
Query: 256 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGK 432
S S+D + +W L + K L+ L GHS V C ++NP++ ++ S S D+++RIW GK
Sbjct: 460 SGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWG--PGK 517
Query: 433 CLKPL 447
KPL
Sbjct: 518 PNKPL 522
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 445 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLIDDDNPXVSFVKFS 615
L AH + V V F+ G + ++S D IW D + TL NP VSFV +S
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNP-VSFVSWS 278
Query: 616 PNGKYILAATLDNTLKLWDYSRG 684
P+ +L LKLWD G
Sbjct: 279 PDDTKLLTCGNAEVLKLWDVDTG 301
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 72.1 bits (169), Expect = 3e-13
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNP-QSN 372
GH I D++WS + ++S+S D+T+++W + SS +C++ H ++V C FNP N
Sbjct: 361 GHTGEILDLSWS-EKGFLLSSSVDETVRLWRVGSSDECIRVF-SHKSFVTCVAFNPVDDN 418
Query: 373 LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
+SGS D VRIWDV + + V+A+ + DG V S G CR + T
Sbjct: 419 YFISGSIDGKVRIWDVSQFRVVDYTDIR-QIVTALCYRPDGKGAVVGSMTGECRFYHTTD 477
Query: 553 GQ 558
Q
Sbjct: 478 NQ 479
Score = 54.4 bits (125), Expect = 7e-08
Identities = 52/225 (23%), Positives = 104/225 (46%), Gaps = 25/225 (11%)
Frame = +1
Query: 70 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-----DGKFEKTISGHK---MGISDV 225
+ H ++ +KFS +G++LAS+ D ++++W D +FE S G++D
Sbjct: 254 SAHDGSIVVMKFSHDGKYLASAGEDCVVRVWNIIEDERRDNEFEVAESDSSCVYFGMNDK 313
Query: 226 AW----------SSDSRLIVSASDDKTL-----KVWELSSGKCLKTLKGHSNYVFCCNFN 360
+ SR ++ + T KV+ +S +GH+ + +++
Sbjct: 314 SQIEPLKTENEKIEKSRGLLRKKSESTCAVLPSKVFSISETP-QHEFRGHTGEILDLSWS 372
Query: 361 PQSNLIVSGSFDESVRIWDV-RTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCR 534
+ ++S S DE+VR+W V + +C++ +H V+ V FN D + +S S DG R
Sbjct: 373 -EKGFLLSSSVDETVRLWRVGSSDECIRVF-SHKSFVTCVAFNPVDDNYFISGSIDGKVR 430
Query: 535 IWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
IWD + + + D V+ + + P+GK + ++ + +
Sbjct: 431 IWDVSQFRVVD--YTDIRQIVTALCYRPDGKGAVVGSMTGECRFY 473
Score = 47.6 bits (108), Expect = 8e-06
Identities = 50/231 (21%), Positives = 94/231 (40%), Gaps = 13/231 (5%)
Frame = +1
Query: 28 SSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 207
S V + T + GHT + + +S G +L SSS D+ +++W + HK
Sbjct: 346 SKVFSISETPQHEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSHK 404
Query: 208 MGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 384
++ VA++ D +S S D +++W++S + + C + P V
Sbjct: 405 SFVTCVAFNPVDDNYFISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALC-YRPDGKGAVV 463
Query: 385 GSFDESVRIWDVRTGKCL--KPLPAHSD---PVSAV----HFNRDGSLIVSSSYDGLCRI 537
GS R + + + + H P + F D ++ +S D RI
Sbjct: 464 GSMTGECRFYHTTDNQLQLDRDISLHGKKKVPNKRITGFQFFPGDSDKVMVTSADSQIRI 523
Query: 538 WDTASGQC-LKTLIDDDNPXVS--FVKFSPNGKYILAATLDNTLKLWDYSR 681
C LK +S F F+ +GK+I++ ++ + +WD+S+
Sbjct: 524 ICGVDTICKLKKASSLRTTLMSPTFASFTSDGKHIVSTIEESGIHVWDFSQ 574
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 71.7 bits (168), Expect = 4e-13
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 3/157 (1%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDES 402
A+S+D R + S D T+K+ + +G CLK L GH + F+P S ++ SGS D
Sbjct: 113 AFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLE 172
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQ-CLKTLI 576
VR+W+ T +C++ + P++++ F+ +G L+ +S L +W G+ T++
Sbjct: 173 VRLWNTTTSECIRSHLFYR-PIASIAFHAEGELLAVASGHKL-HMWHYNRRGEGSSPTVV 230
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
+ V F P+G +L N + D S +
Sbjct: 231 LKTRRSLRAVHFHPHGAPLLLTAEVNEIDSLDSSMSR 267
Score = 39.9 bits (89), Expect = 0.002
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 6/150 (4%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW-SSDS 243
L ++ + FS +G LAS+ D +KI G K ++GH+ V + S
Sbjct: 102 LGAPPRSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHS 161
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNY--VFCCNFNPQSNLIVSGSFDESVRIWD 417
++ S S D +++W ++ +C+++ H Y + F+ + L+ S + +W
Sbjct: 162 EIVASGSLDLEVRLWNTTTSECIRS---HLFYRPIASIAFHAEGELLAVAS-GHKLHMWH 217
Query: 418 V-RTGKCLKPLPAHSD--PVSAVHFNRDGS 498
R G+ P + AVHF+ G+
Sbjct: 218 YNRRGEGSSPTVVLKTRRSLRAVHFHPHGA 247
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 71.7 bits (168), Expect = 4e-13
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L H + SP ++LA++S+DK +KIW K EK ++GH+ + D +S D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGE 272
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 351
+V+AS D T ++W + +GK + H CC
Sbjct: 273 YLVTASSDTTARLWSMRAGKEEMVYQAHRKATVCC 307
Score = 65.7 bits (153), Expect = 3e-11
Identities = 42/186 (22%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
Frame = +1
Query: 121 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS 300
+LA++S D+ I++W A G+ + + ++ + + + +V+A + +++++L S
Sbjct: 12 YLATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPH-IRLFDLRS 70
Query: 301 GKC---LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVS 471
++ H+ V F +++ SGS D SV+IWD+R +C + + S PV+
Sbjct: 71 YNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVS-PVN 129
Query: 472 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLD 651
V + + + ++S +G R+WD + C L+ + + + +G ++AA
Sbjct: 130 TVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDR 189
Query: 652 NTLKLW 669
T +W
Sbjct: 190 GTCYVW 195
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 372
+ H I S ++ + +AS DKT+K+W L K K L GH +V+ C+F+
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGE 272
Query: 373 LIVSGSFDESVRIWDVRTGK 432
+V+ S D + R+W +R GK
Sbjct: 273 YLVTASSDTTARLWSMRAGK 292
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLIVS 258
V++V PN L S + I++W + G + V W D ++V+
Sbjct: 128 VNTVVLHPNQTELISGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMW--DGTMVVA 185
Query: 259 ASDDKTLKVWE-------LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
A+D T VW ++ + L L+ H++++ C +P + + + S D++V+IW+
Sbjct: 186 ANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWN 245
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
+ K K L H V F+ DG +V++S D R+W +G+
Sbjct: 246 LDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGK 292
Score = 52.0 bits (119), Expect = 4e-07
Identities = 44/212 (20%), Positives = 89/212 (41%), Gaps = 8/212 (3%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
HTK V +V F G + S S D +KIW + ++ ++ V + ++
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELI 141
Query: 256 SASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW----DV 420
S + ++VW+L + C + + + ++V+ + + +W +
Sbjct: 142 SGDQNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSLCER 201
Query: 421 RTGKCLKP---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 591
+T +P L AH+ + + + ++S D +IW+ G L+ ++
Sbjct: 202 QTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWN-LDGFKLEKVLTGHER 260
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
V FS +G+Y++ A+ D T +LW GK
Sbjct: 261 WVWDCDFSMDGEYLVTASSDTTARLWSMRAGK 292
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +1
Query: 49 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 207
+ L+ L GH + V FS +GE+L ++S+D ++W GK E H+
Sbjct: 249 FKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHR 301
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 71.3 bits (167), Expect = 6e-13
Identities = 35/114 (30%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +1
Query: 187 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP- 363
K ++GH ++D +SS+++ I S+S DKT++VWELS G C++ + G S +C F+P
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQ-YCIRFHPV 268
Query: 364 QSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
+N + +G+ ++ + +++ TG+ +K L D V+++ + G +I G
Sbjct: 269 NNNFLSAGNANKELTVFNFSTGRIIKKL-LFEDEVTSMDHDHTGQIIFCGDGQG 321
Score = 47.6 bits (108), Expect = 8e-06
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH+K V+ FS N +++ASSS DK I++W G + I G ++
Sbjct: 212 LTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVNNN 271
Query: 247 LIVSASDDKTLKVWELSSGKCLKTL 321
+ + + +K L V+ S+G+ +K L
Sbjct: 272 FLSAGNANKELTVFNFSTGRIIKKL 296
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = +1
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
S L ASD L LK L GHS V +F+ + I S S D+++R+W
Sbjct: 184 SSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVW 243
Query: 415 DVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 585
++ G C++ + S P + F+ + + + + + + +++ ++G+ +K L+ +D
Sbjct: 244 ELSRGVCIRVIYGIS-PQYCIRFHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFED 300
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 562 LKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDIY 705
LK L F FS N +YI +++LD T+++W+ SRG C IY
Sbjct: 209 LKQLTGHSKDVTDF-DFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY 255
Score = 37.1 bits (82), Expect = 0.011
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +1
Query: 250 IVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
IV+ S+D + ++L+ K C+ L+GH V C +N NL+ S F V +W
Sbjct: 419 IVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVW 475
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 70.9 bits (166), Expect = 8e-13
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Frame = +1
Query: 19 SNKSSV-AKPNYTLKFTLA-GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 192
SN SV + P++ T+A GH ++V ++ + G L S +K++++W G
Sbjct: 191 SNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMK 250
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 372
+ GH + + S R +S S D +++W+L +CL T H++ V+ NP +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 373 LIVSGSFDESVRIWDVRT 426
+ SG D+ + + D+ T
Sbjct: 311 HVYSGGRDQCLYLTDLAT 328
Score = 69.7 bits (163), Expect = 2e-12
Identities = 42/157 (26%), Positives = 75/157 (47%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 378
GHK + +A + ++VS +K L+VW+ +G L+GH++ V +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 379 VSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
+SGS D +R+WD+ +CL H+D V A+ N S + S D + D A+ +
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRE 330
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ L ++P + + N I AT D++++ W
Sbjct: 331 SV-LLCTKEHP-IQQLALQDNS--IWVATTDSSVERW 363
Score = 68.1 bits (159), Expect = 5e-12
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 6/199 (3%)
Frame = +1
Query: 106 SPNGEWLASSSADKLIKIWGA-YDGKF-EKTISGHKMGISDVAWSSDSRLIVSASDDKTL 279
S + +L + S D +K W D F T H ++D A + +S L VS S D T+
Sbjct: 49 SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTL-VSCSSDTTV 107
Query: 280 KVWE-LSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRT--GKCLKPL 447
K W+ LS G C +TL+ HS+YV C + +N++ SG V IWD+ KP
Sbjct: 108 KTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPN 167
Query: 448 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGK 627
A+ D S SL S + + + + S T+ V + + G
Sbjct: 168 DANEDSSSNGANGPVTSLRTVGSSNNI-SVQSSPSHGYTPTIAKGHKESVYALAMNDTGT 226
Query: 628 YILAATLDNTLKLWDYSRG 684
+++ + L++WD G
Sbjct: 227 MLVSGGTEKVLRVWDPRTG 245
Score = 64.1 bits (149), Expect = 9e-11
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = +1
Query: 322 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSL 501
KGH V+ N ++VSG ++ +R+WD RTG L H+D V + + G
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 502 IVSSSYDGLCRIWDTASGQCLKT-LIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+S S D + R+WD +CL T + D+ V + +P+ ++ + D L L D
Sbjct: 270 CLSGSSDSMIRLWDLGQQRCLHTYAVHTDS--VWALACNPSFSHVYSGGRDQCLYLTD 325
Score = 39.9 bits (89), Expect = 0.002
Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 5/216 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GHT V + G + S S+D +I++W + T + H + +A +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
+ S D+ L + +L++ + + C +P L + D S IW T
Sbjct: 311 HVYSGGRDQCLYLTDLAT---------RESVLLCTKEHPIQQLALQ---DNS--IWVATT 356
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI----WDTASGQCLKTL-IDDDNP 591
++ PA V F R GS + + R+ + A ++ + +P
Sbjct: 357 DSSVERWPAEVQSPKTV-FQRGGSFLAGNLSFNRARVSLEGLNPAPAYKEPSITVPGTHP 415
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFED 699
V + N + IL ++KLWD +RG ED
Sbjct: 416 IVQH-EILNNKRQILTKDAAGSVKLWDITRGVVVED 450
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 70.9 bits (166), Expect = 8e-13
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Frame = +1
Query: 19 SNKSSV-AKPNYTLKFTLA-GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 192
SN SV + P++ T+A GH ++V ++ + G L S +K++++W G
Sbjct: 191 SNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMK 250
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 372
+ GH + + S R +S S D +++W+L +CL T H++ V+ NP +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 373 LIVSGSFDESVRIWDVRT 426
+ SG D+ + + D+ T
Sbjct: 311 HVYSGGRDQCLYLTDLAT 328
Score = 69.7 bits (163), Expect = 2e-12
Identities = 42/157 (26%), Positives = 75/157 (47%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 378
GHK + +A + ++VS +K L+VW+ +G L+GH++ V +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 379 VSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
+SGS D +R+WD+ +CL H+D V A+ N S + S D + D A+ +
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRE 330
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ L ++P + + N I AT D++++ W
Sbjct: 331 SV-LLCTKEHP-IQQLALQDNS--IWVATTDSSVERW 363
Score = 68.1 bits (159), Expect = 5e-12
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 6/199 (3%)
Frame = +1
Query: 106 SPNGEWLASSSADKLIKIWGA-YDGKF-EKTISGHKMGISDVAWSSDSRLIVSASDDKTL 279
S + +L + S D +K W D F T H ++D A + +S L VS S D T+
Sbjct: 49 SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTL-VSCSSDTTV 107
Query: 280 KVWE-LSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRT--GKCLKPL 447
K W+ LS G C +TL+ HS+YV C + +N++ SG V IWD+ KP
Sbjct: 108 KTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPN 167
Query: 448 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGK 627
A+ D S SL S + + + + S T+ V + + G
Sbjct: 168 DANEDSSSNGANGPVTSLRTVGSSNNI-SVQSSPSHGYTPTIAKGHKESVYALAMNDTGT 226
Query: 628 YILAATLDNTLKLWDYSRG 684
+++ + L++WD G
Sbjct: 227 MLVSGGTEKVLRVWDPRTG 245
Score = 64.1 bits (149), Expect = 9e-11
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 1/118 (0%)
Frame = +1
Query: 322 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSL 501
KGH V+ N ++VSG ++ +R+WD RTG L H+D V + + G
Sbjct: 210 KGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRF 269
Query: 502 IVSSSYDGLCRIWDTASGQCLKT-LIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+S S D + R+WD +CL T + D+ V + +P+ ++ + D L L D
Sbjct: 270 CLSGSSDSMIRLWDLGQQRCLHTYAVHTDS--VWALACNPSFSHVYSGGRDQCLYLTD 325
Score = 39.9 bits (89), Expect = 0.002
Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 5/216 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GHT V + G + S S+D +I++W + T + H + +A +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
+ S D+ L + +L++ + + C +P L + D S IW T
Sbjct: 311 HVYSGGRDQCLYLTDLAT---------RESVLLCTKEHPIQQLALQ---DNS--IWVATT 356
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI----WDTASGQCLKTL-IDDDNP 591
++ PA V F R GS + + R+ + A ++ + +P
Sbjct: 357 DSSVERWPAEVQSPKTV-FQRGGSFLAGNLSFNRARVSLEGLNPAPAYKEPSITVPGTHP 415
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFED 699
V + N + IL ++KLWD +RG ED
Sbjct: 416 IVQH-EILNNKRQILTKDAAGSVKLWDITRGVVVED 450
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 70.1 bits (164), Expect = 1e-12
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 18/186 (9%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGA---YDG--------KFEKTISGHKMGIS 219
GH ++V+ + FS + L S S D I++W +D +E + H M ++
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVT 177
Query: 220 DVA--WSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
D+ + + +I+S+S+D+T KVW LS GK LK + S + +P + +G+
Sbjct: 178 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPS-VINALALDPGGCVFYAGAR 236
Query: 394 DESVRIWDVRTG-----KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
D + I + + L + ++ + + DG+L++S S DG+ +WD S +
Sbjct: 237 DSKIYIGAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLR 296
Query: 559 CLKTLI 576
++TLI
Sbjct: 297 HVRTLI 302
Score = 63.3 bits (147), Expect = 2e-10
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
I +A +++ +V + +WE+++GK LK GH V C F+ +L+VSGS
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 394 DESVRIWDV---------RTGKCL--KPLPAHSDPVSAVHFNRDG--SLIVSSSYDGLCR 534
D S+R+W + + G L H+ V+ + + G ++I+SSS D C+
Sbjct: 141 DGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCK 200
Query: 535 IWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTL 660
+W + G+ LK +I ++ + P G A D+ +
Sbjct: 201 VWSLSRGKLLKNIIFPS--VINALALDPGGCVFYAGARDSKI 240
Score = 58.4 bits (135), Expect = 4e-09
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Frame = +1
Query: 358 NPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 537
N + +V G + +W+V TGK LK H V+ + F+ D SL+VS S DG R+
Sbjct: 87 NNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRV 146
Query: 538 W------DTASGQCLKTLID----DDNPXVSFVKFSPNG--KYILAATLDNTLKLWDYSR 681
W D Q TL + + V+ + G I++++ D T K+W SR
Sbjct: 147 WSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSR 206
Query: 682 GKCFEDI 702
GK ++I
Sbjct: 207 GKLLKNI 213
Score = 49.6 bits (113), Expect = 2e-06
Identities = 41/212 (19%), Positives = 88/212 (41%), Gaps = 17/212 (8%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
+ ++ + G +L I +W GK K GH ++ + +S D L+VS S
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 268 DKTLKVWEL---------SSGKCL--KTLKGHSNYV--FCCNFNPQSNLIVSGSFDESVR 408
D +++VW L G L H+ V ++ + +I+S S D + +
Sbjct: 141 DGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCK 200
Query: 409 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW----DTASGQCLKTLI 576
+W + GK LK + ++A+ + G + + + D I + G + +
Sbjct: 201 VWSLSRGKLLKNI-IFPSVINALALDPGGCVFYAGARDSKIYIGAINATSEYGTQVLGSV 259
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ ++ + + +G +++ + D + +WD
Sbjct: 260 SEKGKAITCLAYCADGNLLISGSEDGVVCVWD 291
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/74 (22%), Positives = 38/74 (51%)
Frame = +1
Query: 460 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILA 639
+P+ A+ N +G+ +V G +W+ A+G+ LK V+ + FS + +++
Sbjct: 79 EPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKW-HGHYRSVTCLVFSGDDSLLVS 137
Query: 640 ATLDNTLKLWDYSR 681
+ D ++++W R
Sbjct: 138 GSQDGSIRVWSLIR 151
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 5/110 (4%)
Frame = +1
Query: 373 LIVSGSFDESVRIWDVRTGK---CLKPL--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 537
+I S S DE + WD++TG KP PAH F L ++ G
Sbjct: 5 VIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNT-SGSIFY 63
Query: 538 WDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
W Q + + + + G Y++ + + LW+ + GK
Sbjct: 64 WSWTKPQA--EVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGK 111
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 70.1 bits (164), Expect = 1e-12
Identities = 54/209 (25%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Frame = +1
Query: 109 PNGEW--LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS----RLIVSASDD 270
P +W +A S + +K++ G++ GH ++ +A+SSDS ++ S S D
Sbjct: 49 PKIDWTAIAVSLSTNTVKLYSPVTGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSD 108
Query: 271 KTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL 447
T++ W+ S + + + G+ +F ++ ++ +++G E V +WD R K + L
Sbjct: 109 GTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSKQVACL 168
Query: 448 -PAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDDDNPXVSFV 606
+H D V+ VHF N+ L+ S+S DGL +++T L+++I + + +
Sbjct: 169 EESHMDDVTQVHFVPNKPNKLL-SASVDGLICLFNTEGDINDDDHLESVI-NVGTSIGKI 226
Query: 607 KFSPNG-KYILAATLDNTLKLWDYSRGKC 690
F +G K + T TL +W++ G C
Sbjct: 227 GFLGDGYKKLWCLTHIETLSIWNWEDGSC 255
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 70.1 bits (164), Expect = 1e-12
Identities = 45/197 (22%), Positives = 96/197 (48%), Gaps = 5/197 (2%)
Frame = +1
Query: 106 SPNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 282
+P+G + +++ D ++++ A + + H +++++ S D +L+ D
Sbjct: 244 APSGSLRVMTANNDCTVRLFDATNFALLNRFAFH-WSVNNISTSPDGKLVAVLGDSPECL 302
Query: 283 VWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-GKCLKPLPAHS 459
+ + SGK + L+GH +Y F ++P ++ +G+ D + R+WDVR + LK L +
Sbjct: 303 LADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNM 362
Query: 460 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCLKTLIDDDNPXVSFVKFSPNGKYI 633
+ A+ F DG + + ++DT +G QC + D ++ + FSP+ + +
Sbjct: 363 GAIRALRFTSDGRFLAMAEPADFVHLFDTEAGYSQCQEI---DLFGEIAGISFSPDTEAL 419
Query: 634 LAATLDNTL-KLWDYSR 681
D T L +++R
Sbjct: 420 FVGVADRTYGSLLEFNR 436
Score = 46.4 bits (105), Expect = 2e-05
Identities = 35/152 (23%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +1
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI-VSGSFDESVRI 411
S S +++A++D T+++++ ++ L H + V + +P L+ V G E + +
Sbjct: 246 SGSLRVMTANNDCTVRLFDATNFALLNRFAFHWS-VNNISTSPDGKLVAVLGDSPECL-L 303
Query: 412 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDN 588
D +GK + L H D + ++ +G ++ + + D CR+WD + Q LK L +
Sbjct: 304 ADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVL-KGNM 362
Query: 589 PXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
+ ++F+ +G+++ A + + L+D G
Sbjct: 363 GAIRALRFTSDGRFLAMAEPADFVHLFDTEAG 394
Score = 34.3 bits (75), Expect = 0.080
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSDS 243
L GH S + PNG+ LA+ + D ++W + + K + G+ I + ++SD
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 244 RLIVSASDDKTLKVWELSSG 303
R + A + +++ +G
Sbjct: 375 RFLAMAEPADFVHLFDTEAG 394
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSS 300
+ASS+ + ++++W + + H+ + + +SS D L+ S SDD ++K+W ++
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 301 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKC-LKPLPAHSDPVSA 474
G + T+K +N + C F ++ + GS D V +D+R K L + H VS
Sbjct: 609 GVSIGTIKTKAN-ICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSY 667
Query: 475 VHFNRDGSLIVSSSYDGLCRIWD 543
V F D S +VSSS D ++WD
Sbjct: 668 VRF-VDSSTLVSSSTDNTLKLWD 689
Score = 69.3 bits (162), Expect = 2e-12
Identities = 51/214 (23%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY----DGK---FEKTISGHKMGISDV 225
L + V ++ F +GE+ A++ +K IKI+ DG+ + + +S +
Sbjct: 480 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGI 539
Query: 226 AWSSDSRLIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDE 399
W+S + V++S+ + ++VW+++ + + +K H V+ +++ L+ SGS D
Sbjct: 540 CWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 599
Query: 400 SVRIWDVRTGKCLKPLPAHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 576
SV++W + G + + ++ + V F + G + S D +D + + +
Sbjct: 600 SVKLWSINQGVSIGTIKTKAN-ICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTM 658
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYS 678
+ VS+V+F + + ++T DNTLKLWD S
Sbjct: 659 IGHHKTVSYVRFVDSSTLVSSST-DNTLKLWDLS 691
Score = 42.3 bits (95), Expect = 3e-04
Identities = 52/160 (32%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Frame = +1
Query: 79 TKA-VSSVKF-SPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHKMGISDVAWSSDSRL 249
TKA + V+F S G LA SAD + + + K T+ GH +S V + DS
Sbjct: 617 TKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSST 675
Query: 250 IVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
+VS+S D TLK+W+LS SG L + GH+N + I +GS V +
Sbjct: 676 LVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFV 735
Query: 412 WDVRTGKCLKPLPAHS------DPVSAVHFNRDGSLIVSS 513
+ K P+P S DPVS + + D S +SS
Sbjct: 736 YH----KAF-PMPVLSYKFKTIDPVSELEVD-DASQFISS 769
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 162
T+ GH K VS V+F + L SSS D +K+W
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLW 688
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSS 300
+ASS+ + ++++W + + H+ + + +SS D L+ S SDD ++K+W ++
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 301 GKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKC-LKPLPAHSDPVSA 474
G + T+K +N + C F ++ + GS D V +D+R K L + H VS
Sbjct: 609 GVSIGTIKTKAN-ICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSY 667
Query: 475 VHFNRDGSLIVSSSYDGLCRIWD 543
V F D S +VSSS D ++WD
Sbjct: 668 VRF-VDSSTLVSSSTDNTLKLWD 689
Score = 69.3 bits (162), Expect = 2e-12
Identities = 51/214 (23%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY----DGK---FEKTISGHKMGISDV 225
L + V ++ F +GE+ A++ +K IKI+ DG+ + + +S +
Sbjct: 480 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGI 539
Query: 226 AWSSDSRLIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDE 399
W+S + V++S+ + ++VW+++ + + +K H V+ +++ L+ SGS D
Sbjct: 540 CWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 599
Query: 400 SVRIWDVRTGKCLKPLPAHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 576
SV++W + G + + ++ + V F + G + S D +D + + +
Sbjct: 600 SVKLWSINQGVSIGTIKTKAN-ICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTM 658
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYS 678
+ VS+V+F + + ++T DNTLKLWD S
Sbjct: 659 IGHHKTVSYVRFVDSSTLVSSST-DNTLKLWDLS 691
Score = 42.3 bits (95), Expect = 3e-04
Identities = 52/160 (32%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Frame = +1
Query: 79 TKA-VSSVKF-SPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHKMGISDVAWSSDSRL 249
TKA + V+F S G LA SAD + + + K T+ GH +S V + DS
Sbjct: 617 TKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSST 675
Query: 250 IVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
+VS+S D TLK+W+LS SG L + GH+N + I +GS V +
Sbjct: 676 LVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFV 735
Query: 412 WDVRTGKCLKPLPAHS------DPVSAVHFNRDGSLIVSS 513
+ K P+P S DPVS + + D S +SS
Sbjct: 736 YH----KAF-PMPVLSYKFKTIDPVSELEVD-DASQFISS 769
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 162
T+ GH K VS V+F + L SSS D +K+W
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLW 688
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 69.7 bits (163), Expect = 2e-12
Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 372
+ GH+ ++ + ++ + L+ S + D T VW +G+ L T +GHS V+CC+ + S+
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 373 LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV--------SSSYDGL 528
+++GS D++ ++WDV++GK L P +V F+ L V +SS +
Sbjct: 93 RLITGSADQTAKLWDVKSGKELFTF-KFGAPARSVDFSVGDHLAVITTDHFVGTSSAIHV 151
Query: 529 CRIWDTASGQCLKTLI----DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
RI + Q +++ D ++ + P + I++ D +++WD GK
Sbjct: 152 KRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGK 208
Score = 60.9 bits (141), Expect = 8e-10
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 14/216 (6%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
+ GH + ++ ++++ NG+ L S + D +W A +G+ T GH + S DS
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSF---DESVRIW 414
+++ S D+T K+W++ SGK L T K G + +I + F ++ +
Sbjct: 93 RLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSSAIHVK 152
Query: 415 DV------RTGKCLKPL--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 570
+ + G + L P ++ + IVS D RIWD +G+ LK
Sbjct: 153 RIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQ 212
Query: 571 LIDD--DNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
++ ++ + + + + L + D T KLWD
Sbjct: 213 SDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 52.4 bits (120), Expect = 3e-07
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 17/169 (10%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLI 252
K ++ + P + + S D I+IW A GK K GHK I+ + ++D
Sbjct: 176 KKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHF 235
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE--SVRIWDVRT 426
++ S DKT K+W++ + +KT V +P N +V G + +V D R
Sbjct: 236 LTGSHDKTAKLWDMRTLTLIKTYTTVVP-VNAVAMSPLLNHVVLGGGQDASAVTTTDHRA 294
Query: 427 GKC------------LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 537
GK + + H P++A+ F+ DG S DG R+
Sbjct: 295 GKFEAKFYDTILQEEIGGVKGHFGPINALAFSPDGKSFSSGGEDGYVRL 343
Score = 50.4 bits (115), Expect = 1e-06
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 16/185 (8%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T GH+ AV S + L + SAD+ K+W GK T S V +S
Sbjct: 74 TYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARS-VDFSVGD 132
Query: 244 RLIVSASD-----DKTLKVWELSS------GKCLKTLKGHSNY--VFCCNFNPQSNLIVS 384
L V +D + V ++ G + L+ + + P + IVS
Sbjct: 133 HLAVITTDHFVGTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVS 192
Query: 385 GSFDESVRIWDVRTGKCLKPLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
G D ++RIWD TGK LK H + ++++ D S ++ S+D ++WD +
Sbjct: 193 GGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTL 252
Query: 556 QCLKT 570
+KT
Sbjct: 253 TLIKT 257
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +1
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL 375
K I+ W ++ IVS +D +++W+ +GK LK GH + +
Sbjct: 175 KKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSH 234
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 477
++GS D++ ++WD+RT +K PV+AV
Sbjct: 235 FLTGSHDKTAKLWDMRTLTLIKTYTT-VVPVNAV 267
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 69.7 bits (163), Expect = 2e-12
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 28/235 (11%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISD------VA 228
L GHTK VSS+ G + S S D ++++ + G + S ++ S+ V+
Sbjct: 173 LKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYD-FQGMNSRLQSFRQIEPSEGHQVRSVS 231
Query: 229 WSSDSR--LIVSAS------DDKTLKVWELSSG----KCLKTLKGHSNYVFCCNFNPQSN 372
WS S L V+ S D L + E G + LK KGH + C ++P++
Sbjct: 232 WSPTSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGEWHPRTK 291
Query: 373 -LIVSGSFDESVRIWDVRT----GKCLKPLPAHSD--PVSAVHFNRDGSLIVSSSYDGLC 531
+++ S D S+RIWDV + +KP A PV+ ++RDG I DG
Sbjct: 292 ETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGDGSI 351
Query: 532 RIWDTASGQCLKTLI---DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
+IW G + I ++ VKFS +G+ +L+ + D +LK+WD + K
Sbjct: 352 QIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMK 406
Score = 64.5 bits (150), Expect = 7e-11
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Frame = +1
Query: 187 KTISGHKMGISDVAWSSDSR-LIVSASDDKTLKVWE----LSSGKCLKTLKGHSNYV--F 345
K GH G++ W ++ ++++S+D +L++W+ LS + +K V
Sbjct: 272 KNTKGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVT 331
Query: 346 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL----PAHSDPVSAVHFNRDGSLIVSS 513
C ++ I G D S++IW ++ G +P AH+D +++V F+ DG +++S
Sbjct: 332 TCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSR 391
Query: 514 SYDGLCRIWDTAS-GQCLKTL--IDDDNPXVSFVKFSPNGKYILAAT 645
S+DG ++WD + LK + + P + V FSP+ + IL T
Sbjct: 392 SFDGSLKVWDLRQMKEALKVFEGLPNYYPQTN-VAFSPDEQIILTGT 437
Score = 34.3 bits (75), Expect = 0.080
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISG--HKMGISDVAWSSDSR 246
HT ++SVKFS +G L S S D +K+W K K G + ++VA+S D +
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 247 LIVSAS 264
+I++ +
Sbjct: 432 IILTGT 437
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 69.3 bits (162), Expect = 2e-12
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Frame = +1
Query: 232 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
S D +L+ DD + + S+G+ + TLKGH +Y F ++P +G+ D++ RI
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 345
Query: 412 WDVR-TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
WD R + + L + V ++ F DG + + I+DT SG + ID
Sbjct: 346 WDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFG 405
Query: 589 PXVSFVKFSPNGKYILAATLDNTL-KLWDYSR 681
+S + FSP+ + + D T L +Y R
Sbjct: 406 -EISGISFSPDTESLFIGVWDRTYGSLLEYGR 436
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/111 (21%), Positives = 48/111 (43%)
Frame = +1
Query: 352 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 531
+ +P L+ D + D G+ + L H D A ++ +G + + D C
Sbjct: 284 SLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTC 343
Query: 532 RIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
RIWDT ++ + V ++F+ +G+Y+ A + + ++D G
Sbjct: 344 RIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG 394
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 240
TL GH + + PNG A+ + DK +IW + + G+ + + ++SD
Sbjct: 314 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 373
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
R + A + +++ SG + + +F+P + + G +D +
Sbjct: 374 GRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTESLFIGVWDRT 427
Score = 33.1 bits (72), Expect = 0.19
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +1
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLI--VSSSYDGLCRIWDTASGQCLK 567
D VR +D+ K ++ L + PV+ + DG L+ V DGL + DT++GQ +
Sbjct: 257 DCGVRDFDMERYKLVQ-LFRYLWPVNHSSLSPDGKLVAVVGDDPDGL--LVDTSNGQTIG 313
Query: 568 TLIDDDNPXVSFVK-FSPNGKYILAATLDNTLKLWD 672
TL + SF + PNG D T ++WD
Sbjct: 314 TL--KGHLDYSFASAWHPNGVTFATGNQDKTCRIWD 347
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 69.3 bits (162), Expect = 2e-12
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Frame = +1
Query: 232 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
S D +L+ DD + + S+G+ + TLKGH +Y F ++P +G+ D++ RI
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRI 339
Query: 412 WDVR-TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
WD R + + L + V ++ F DG + + I+DT SG + ID
Sbjct: 340 WDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGYKKEQEIDFFG 399
Query: 589 PXVSFVKFSPNGKYILAATLDNTL-KLWDYSR 681
+S + FSP+ + + D T L +Y R
Sbjct: 400 -EISGISFSPDTESLFIGVWDRTYGSLLEYGR 430
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/111 (21%), Positives = 48/111 (43%)
Frame = +1
Query: 352 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 531
+ +P L+ D + D G+ + L H D A ++ +G + + D C
Sbjct: 278 SLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTC 337
Query: 532 RIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
RIWDT ++ + V ++F+ +G+Y+ A + + ++D G
Sbjct: 338 RIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSG 388
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 240
TL GH + + PNG A+ + DK +IW + + G+ + + ++SD
Sbjct: 308 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 367
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
R + A + +++ SG + + +F+P + + G +D +
Sbjct: 368 GRYVAMAEPADFVHIYDTKSGYKKEQEIDFFGEISGISFSPDTESLFIGVWDRT 421
Score = 33.1 bits (72), Expect = 0.19
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +1
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLI--VSSSYDGLCRIWDTASGQCLK 567
D VR +D+ K ++ L + PV+ + DG L+ V DGL + DT++GQ +
Sbjct: 251 DCGVRDFDMERYKLVQ-LFRYLWPVNHSSLSPDGKLVAVVGDDPDGL--LVDTSNGQTIG 307
Query: 568 TLIDDDNPXVSFVK-FSPNGKYILAATLDNTLKLWD 672
TL + SF + PNG D T ++WD
Sbjct: 308 TL--KGHLDYSFASAWHPNGVTFATGNQDKTCRIWD 341
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 68.1 bits (159), Expect = 5e-12
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 5/163 (3%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSD 240
+L GHT+ VSSV + P + + SSS D ++ W GK + G + DV S
Sbjct: 267 SLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGES- 324
Query: 241 SRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVR 408
S LI + D L+VW+ + + HS+++ C ++ S ++S S+D +
Sbjct: 325 SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 409 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 537
+WD+RT L + H+D V + + + G +VS D RI
Sbjct: 385 LWDLRTAWPLSVIDTHNDKVLSADWWK-GESVVSGGADSNLRI 426
Score = 56.4 bits (130), Expect = 2e-08
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 4/206 (1%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH +V SV +G + SSS D I +W E T G + + ++
Sbjct: 201 LRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTN----ESTSEGESVSVKKRKGNNQ-- 254
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
A + + S G+ + +L GH+ V + P+ ++I S S+D SVR WDV T
Sbjct: 255 ----AEESQ-------SEGEAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVET 302
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTL-IDDDNPXV 597
GK L ++ V + S LI + D + R+WD G + +
Sbjct: 303 GKDSLNLFC-GKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWI 361
Query: 598 SFVKFSPNGKY-ILAATLDNTLKLWD 672
S K+ + + +L+A+ D + LWD
Sbjct: 362 SACKWHKSSWFHLLSASYDGKIMLWD 387
Score = 41.1 bits (92), Expect = 7e-04
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 184 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS---NYVFCCN 354
E+ S H +S V SS R I++ D +VW S+G C L+GHS + V N
Sbjct: 103 EEEPSLHDDWVSAVNGSSP-RFILTGCYDGLGRVWS-SAGSCSHILEGHSGAISSVALVN 160
Query: 355 FNPQSNLIVS-GSFDESVRIW--------DVRTG-KCLKPLPAHSDPVSAVHFNRDGSLI 504
N + V+ S D ++R++ D T + K L H V +V + G+++
Sbjct: 161 SNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMV 220
Query: 505 VSSSYDGLCRIWDT 546
SSS+D +W+T
Sbjct: 221 CSSSWDCTINLWNT 234
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 454 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGK-- 627
H D VSAV+ I++ YDGL R+W +A G C L S + N
Sbjct: 109 HDDWVSAVN-GSSPRFILTGCYDGLGRVWSSA-GSCSHILEGHSGAISSVALVNSNDAET 166
Query: 628 -YILAATLDNTLKLWDY 675
+ A+ D TL+L+ +
Sbjct: 167 VTVATASKDRTLRLFKF 183
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 67.7 bits (158), Expect = 7e-12
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Frame = +1
Query: 121 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELS 297
+LAS+ D +++IW A G+ + H+ V +S SD VS SDD ++K+W ++
Sbjct: 780 YLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSIN 839
Query: 298 SGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKC-LKPLPAHSDPVS 471
+ L T+ +N V C F+ SN L+ GS D V +D+R K L H VS
Sbjct: 840 EKRSLGTIWSPAN-VCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVS 898
Query: 472 AVHFNRDGSLIVSSSYDGLCRIWD 543
V F D IVS+S D ++W+
Sbjct: 899 YVKF-MDSETIVSASTDNSLKLWN 921
Score = 66.5 bits (155), Expect = 2e-11
Identities = 53/216 (24%), Positives = 103/216 (47%), Gaps = 11/216 (5%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--------KMGISD 222
L V S+ F P+ E +A++ K IKI+ ++ +++ H K +S
Sbjct: 712 LLNSASVVCSLSFDPDEEHIAAAGISKKIKIFD-FNAFMNESVGVHYPLVEMVNKSKLSC 770
Query: 223 VAWSSDSRLIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFD 396
V W+S + ++++D D +++W+ +G+ H + +F+P VSGS D
Sbjct: 771 VCWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDD 830
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL 573
SV++W + + L + + ++ V V F+ L+ S D +D +
Sbjct: 831 CSVKLWSINEKRSLGTIWSPAN-VCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCT 889
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSR 681
+ VS+VKF + + I++A+ DN+LKLW+ ++
Sbjct: 890 LAGHEKAVSYVKFM-DSETIVSASTDNSLKLWNLNK 924
Score = 47.6 bits (108), Expect = 8e-06
Identities = 54/161 (33%), Positives = 75/161 (46%), Gaps = 19/161 (11%)
Frame = +1
Query: 88 VSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKT----ISGHKMGISDVAWSSDSRLI 252
V V+FS + LA SAD K++ YD ++ KT ++GH+ +S V + DS I
Sbjct: 853 VCCVQFSSYSNHLLAFGSAD--YKVY-CYDLRYVKTPWCTLAGHEKAVSYVKFM-DSETI 908
Query: 253 VSASDDKTLKVWE--------LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 408
VSAS D +LK+W LS G C T KGH+N + I GS E+
Sbjct: 909 VSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIACGS--ETNE 966
Query: 409 IWDVRTGKCLKPLPAHS------DPVSAVHFNRDGSLIVSS 513
++ K L P+P S DP+S + D VSS
Sbjct: 967 VYSYY--KSL-PMPMTSYKFGSVDPISGNEYFDDNGQFVSS 1004
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 162
TLAGH KAVS VKF + E + S+S D +K+W
Sbjct: 889 TLAGHEKAVSYVKFM-DSETIVSASTDNSLKLW 920
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 502 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNG-KYILAATLDNTLKLWDYS 678
+ S+ YDG+ +IWD +GQ + S V FSP+ ++ + D ++KLW +
Sbjct: 781 LASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWS-VDFSPSDPTKFVSGSDDCSVKLWSIN 839
Query: 679 RGKCFEDIY 705
+ I+
Sbjct: 840 EKRSLGTIW 848
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 67.7 bits (158), Expect = 7e-12
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKMGISDVAWSSDSR--L 249
+V+ V +SP+G + + +++++ G D + I H G++D+A+S+ ++
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLC 478
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
+ + DDKT+KVW+ ++G T +GH Y C ++ I S + D ++ W
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 591
A + + ++ DG+ + S +S DG I W+ + G +T
Sbjct: 539 NMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKR 598
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWD 672
+ V+F LAA D ++K WD
Sbjct: 599 SLGVVQFDTTKNRYLAAGDDFSIKFWD 625
Score = 54.8 bits (126), Expect = 5e-08
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Frame = +1
Query: 58 KFTLAGHTKAVSSV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKMGISDVA 228
++T GH V S+ + N +++ S++ D IK W YD + + +A
Sbjct: 499 RYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYEAPGRWCTTMA 557
Query: 229 WSSDSRLIVSASDDKT----LKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSF 393
+S+D + S K + W S G +T +G H + F+ N ++
Sbjct: 558 YSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGD 617
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSA--VHFNRDGSLIVSSSYDGLCRIWDTASG 555
D S++ WD+ T + L + A ++ + FN++GSL+ S+ D + ++ + G
Sbjct: 618 DFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIKVMANSDG 673
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDES 402
A S + ++SAS K + ++ + + K + T F+PQ N I++ G D +
Sbjct: 831 ALSKNDSYVMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDST 889
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 546
++I++VR + L HS ++ + F+ +++VSS D +W+T
Sbjct: 890 IQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
Score = 37.5 bits (83), Expect = 0.009
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 11/167 (6%)
Frame = +1
Query: 85 AVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 261
A + + F P + +A D I+I+ + + + GH I+ +A+S+ ++VS+
Sbjct: 867 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 926
Query: 262 SDDKTLKV-----WELSSGKCLKTLKGHSNYVFC---CNFNPQSNLIVSGSFDESVRIWD 417
D L V WE K L+ +G S F+ Q + + + I++
Sbjct: 927 GADAQLCVWNTDGWEKQKSKVLQIPQGRSTSSLSDTRVQFH-QDQVHFLVVHETQLAIYE 985
Query: 418 VRTGKCLKPLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
+C+K P P++ F+ D LI +S D ++ +A+
Sbjct: 986 TTKLECMKQWPVRESAAPITHATFSCDSQLIYTSFMDATICVFSSAN 1032
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 177
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 900 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 939
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 67.7 bits (158), Expect = 7e-12
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKMGISDVAWSSDSR--L 249
+V+ V +SP+G + + +++++ G D + I H G++D+A+S+ ++
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLC 478
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
+ + DDKT+KVW+ ++G T +GH Y C ++ I S + D ++ W
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 591
A + + ++ DG+ + S +S DG I W+ + G +T
Sbjct: 539 NMGSRVDYEAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKR 598
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWD 672
+ V+F LAA D ++K WD
Sbjct: 599 SLGVVQFDTTKNRYLAAGDDFSIKFWD 625
Score = 54.8 bits (126), Expect = 5e-08
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Frame = +1
Query: 58 KFTLAGHTKAVSSV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKMGISDVA 228
++T GH V S+ + N +++ S++ D IK W YD + + +A
Sbjct: 499 RYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYEAPGRWCTTMA 557
Query: 229 WSSDSRLIVSASDDKT----LKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSF 393
+S+D + S K + W S G +T +G H + F+ N ++
Sbjct: 558 YSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGD 617
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSA--VHFNRDGSLIVSSSYDGLCRIWDTASG 555
D S++ WD+ T + L + A ++ + FN++GSL+ S+ D + ++ + G
Sbjct: 618 DFSIKFWDMDTIQLLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIKVMANSDG 673
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDES 402
A S + ++SAS K + ++ + + K + T F+PQ N I++ G D +
Sbjct: 831 ALSKNDSYVMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDST 889
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 546
++I++VR + L HS ++ + F+ +++VSS D +W+T
Sbjct: 890 IQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 937
Score = 37.5 bits (83), Expect = 0.009
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 11/167 (6%)
Frame = +1
Query: 85 AVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 261
A + + F P + +A D I+I+ + + + GH I+ +A+S+ ++VS+
Sbjct: 867 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 926
Query: 262 SDDKTLKV-----WELSSGKCLKTLKGHSNYVFC---CNFNPQSNLIVSGSFDESVRIWD 417
D L V WE K L+ +G S F+ Q + + + I++
Sbjct: 927 GADAQLCVWNTDGWEKQKSKVLQIPQGRSTSSLSDTRVQFH-QDQVHFLVVHETQLAIYE 985
Query: 418 VRTGKCLKPLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
+C+K P P++ F+ D LI +S D ++ +A+
Sbjct: 986 TTKLECMKQWPVRESAAPITHATFSCDSQLIYTSFMDATICVFSSAN 1032
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 177
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 900 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 939
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 67.7 bits (158), Expect = 7e-12
Identities = 49/207 (23%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKMGISDVAWSSDSR--L 249
+V+ V +SP+G + + +++++ G D + I H G++D+++S+ ++
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLC 478
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
+++ DDKT+KVW+ ++G T +GH Y C ++ I S + D ++ W
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 591
A + + ++ DG+ + S +S DG I W+ + G +T
Sbjct: 539 NMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKR 598
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWD 672
+ V+F LAA D ++K WD
Sbjct: 599 SLGVVQFDTTKNRYLAAGDDFSIKFWD 625
Score = 48.4 bits (110), Expect = 5e-06
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 10/176 (5%)
Frame = +1
Query: 58 KFTLAGHTKAVSSV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKMGISDVA 228
+ T GH V SV + N +++ S++ D IK W YD + + +A
Sbjct: 499 RHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYDAPGRWCTTMA 557
Query: 229 WSSDSRLIVSASDDKT----LKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSF 393
+S+D + S K + W S G +T +G H + F+ N ++
Sbjct: 558 YSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGD 617
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSA--VHFNRDGSLIVSSSYDGLCRIWDTASG 555
D S++ WD+ + L + ++ + FN++GSL+ S + + +I + G
Sbjct: 618 DFSIKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGNENVIKIMANSDG 673
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDES 402
A S + ++SAS K + ++ + + K + T F+PQ N I++ G D +
Sbjct: 842 ALSKNDSYVMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDST 900
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 546
++I++VR + L HS ++ + F+ +++VSS D +W+T
Sbjct: 901 IQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
Score = 33.1 bits (72), Expect = 0.19
Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Frame = +1
Query: 85 AVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 261
A + + F P + +A D I+I+ + + + GH I+ +A+S+ ++VS+
Sbjct: 878 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 937
Query: 262 SDDKTLKV-----WELSSGKCLKTLKGHSNYV---FCCNFN-PQSNLIVSGSFDESVRIW 414
D L V WE K L +G N F+ Q++ +V + + I+
Sbjct: 938 GADAQLCVWNTDGWEKQRSKVLPLPQGRPNSAPSDTRVQFHQDQAHFLV--VHETQLAIY 995
Query: 415 DVRTGKCLKPLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
+ +C+K P++ F+ D L+ +S D ++ +A+
Sbjct: 996 ETTKLECMKQWAVRESLAPITHATFSCDSQLVYASFMDATVCVFSSAN 1043
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 177
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 911 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 950
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 67.7 bits (158), Expect = 7e-12
Identities = 49/207 (23%), Positives = 96/207 (46%), Gaps = 11/207 (5%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKMGISDVAWSSDSR--L 249
+V+ V +SP+G + + +++++ G D + I H G++D+++S+ ++
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLC 478
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
+++ DDKT+KVW+ ++G T +GH Y C ++ I S + D ++ W
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYD 538
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 591
A + + ++ DG+ + S +S DG I W+ + G +T
Sbjct: 539 NMGSRVDYDAPGRWCTTMAYSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKR 598
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWD 672
+ V+F LAA D ++K WD
Sbjct: 599 SLGVVQFDTTKNRYLAAGDDFSIKFWD 625
Score = 48.4 bits (110), Expect = 5e-06
Identities = 40/176 (22%), Positives = 75/176 (42%), Gaps = 10/176 (5%)
Frame = +1
Query: 58 KFTLAGHTKAVSSV--KFSPNGEWLASSSADKLIKIWGAYDGKFEKT-ISGHKMGISDVA 228
+ T GH V SV + N +++ S++ D IK W YD + + +A
Sbjct: 499 RHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW-LYDNMGSRVDYDAPGRWCTTMA 557
Query: 229 WSSDSRLIVSASDDKT----LKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLIVSGSF 393
+S+D + S K + W S G +T +G H + F+ N ++
Sbjct: 558 YSADGTRLFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGD 617
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSA--VHFNRDGSLIVSSSYDGLCRIWDTASG 555
D S++ WD+ + L + ++ + FN++GSL+ S + + +I + G
Sbjct: 618 DFSIKFWDMDAVQLLTAIDGDGGLQASPRIRFNKEGSLLAVSGNENVIKIMANSDG 673
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDES 402
A S + ++SAS K + ++ + + K + T F+PQ N I++ G D +
Sbjct: 842 ALSKNDSYVMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDST 900
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 546
++I++VR + L HS ++ + F+ +++VSS D +W+T
Sbjct: 901 IQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT 948
Score = 33.1 bits (72), Expect = 0.19
Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 12/168 (7%)
Frame = +1
Query: 85 AVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 261
A + + F P + +A D I+I+ + + + GH I+ +A+S+ ++VS+
Sbjct: 878 AATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSS 937
Query: 262 SDDKTLKV-----WELSSGKCLKTLKGHSNYV---FCCNFN-PQSNLIVSGSFDESVRIW 414
D L V WE K L +G N F+ Q++ +V + + I+
Sbjct: 938 GADAQLCVWNTDGWEKQRSKVLPLPQGRPNSAPSDTRVQFHQDQAHFLV--VHETQLAIY 995
Query: 415 DVRTGKCLKPLPAHSD--PVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
+ +C+K P++ F+ D L+ +S D ++ +A+
Sbjct: 996 ETTKLECMKQWAVRESLAPITHATFSCDSQLVYASFMDATVCVFSSAN 1043
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 177
+K L GH+K ++ + FS L SS AD + +W DG
Sbjct: 911 VKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNT-DG 950
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 67.3 bits (157), Expect = 9e-12
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 5/208 (2%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADK-LIKIWGAYDGKFEKTISGHKMGISDVAWSSD 240
T+ GH + + N L+S S D+ +++ F + GHK + + WS D
Sbjct: 252 TMGGHQTRTGVLAW--NSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHD 309
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVS--GSFDESVRI 411
R + S +D L VW S + + L H+ V ++P QS+L+ S G+ D +R
Sbjct: 310 DRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRF 369
Query: 412 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTASGQCLKTLIDDDN 588
W+ G L + S + ++ + Y +W S + TL +
Sbjct: 370 WNTTNGNQLNSIDTGSQVCNLAWSKNVNEIVSTHGYSQNQIMLWKYPSMSKVATL-TGHS 428
Query: 589 PXVSFVKFSPNGKYILAATLDNTLKLWD 672
V ++ SP+G+ I+ D TL+ W+
Sbjct: 429 MRVLYLATSPDGQTIVTGAGDETLRFWN 456
Score = 64.5 bits (150), Expect = 7e-11
Identities = 47/207 (22%), Positives = 96/207 (46%), Gaps = 6/207 (2%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
G +V SV+++ G +++ ++ +++W K +T+ GH+ +AW +SR++
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAW--NSRIL 270
Query: 253 VSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
S S D+ + ++ + L GH + V ++ + SG D + +W+ +
Sbjct: 271 SSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQ 330
Query: 430 KCLKPLPAHSDPVSAVHFN-RDGSLIVS--SSYDGLCRIWDTASGQCLKTLIDDDNPXVS 600
+ + L H+ V A+ ++ SL+ S + D R W+T +G L ++ D V
Sbjct: 331 QPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSI--DTGSQVC 388
Query: 601 FVKFSPNGKYILA--ATLDNTLKLWDY 675
+ +S N I++ N + LW Y
Sbjct: 389 NLAWSKNVNEIVSTHGYSQNQIMLWKY 415
Score = 61.7 bits (143), Expect = 5e-10
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASS---SADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 237
L HT AV ++ +SP+ L +S +AD+ I+ W +G +I + ++AWS
Sbjct: 336 LTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQ-VCNLAWSK 394
Query: 238 DSRLIVSAS--DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
+ IVS + +W+ S + TL GHS V +P IV+G+ DE++R
Sbjct: 395 NVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRF 454
Query: 412 WDV 420
W+V
Sbjct: 455 WNV 457
Score = 55.6 bits (128), Expect = 3e-08
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 7/179 (3%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DS 243
L GH V +K+S + LAS D + +W + + ++ H + + WS S
Sbjct: 294 LVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQS 353
Query: 244 RLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCN--FNPQSNLIVS--GSFDESV 405
L+ S D+ ++ W ++G L ++ S CN ++ N IVS G +
Sbjct: 354 SLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQV---CNLAWSKNVNEIVSTHGYSQNQI 410
Query: 406 RIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 582
+W + + L HS V + + DG IV+ + D R W+ ++T + D
Sbjct: 411 MLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVKMQTPVKD 469
Score = 31.5 bits (68), Expect = 0.57
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 171
P+ + TL GH+ V + SP+G+ + + + D+ ++ W +
Sbjct: 416 PSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVF 458
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 67.3 bits (157), Expect = 9e-12
Identities = 52/225 (23%), Positives = 108/225 (48%), Gaps = 5/225 (2%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKMG--I 216
+++L L GH K V+ + + L ++S D+ ++IW G+ ++ G ++G I
Sbjct: 133 SFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCII 192
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
S+ W L+V + +K W + + L +L G V+ + ++L+ +G+ D
Sbjct: 193 SEGPW-----LLVGMPN--LVKAWNIQNNADL-SLNGPVGQVY--SLVVGTDLLFAGTQD 242
Query: 397 ESVRIWDVR-TGKCLKPLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 570
S+ +W T C P + ++ V + + S + D ++W + QC++T
Sbjct: 243 GSILVWRYNSTTSCFDPAASLLGHTLAVVSLYVGANRLYSGAMDNSIKVWSLDNLQCIQT 302
Query: 571 LIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDIY 705
L + + +S + + +++L+ +LDNT+K+W + G E Y
Sbjct: 303 LTEHTSVVMSLICWD---QFLLSCSLDNTVKIWAATEGGNLEVTY 344
Score = 34.3 bits (75), Expect = 0.080
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 2/142 (1%)
Frame = +1
Query: 277 LKVWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPA 453
L W L T L GH V S+ + + S DE+VRIWD +G+C L
Sbjct: 125 LHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNL 184
Query: 454 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYI 633
+ V + + L+V L + W+ + L + P +
Sbjct: 185 GGE-VGCI-ISEGPWLLV--GMPNLVKAWNIQNNADLSL----NGPVGQVYSLVVGTDLL 236
Query: 634 LAATLDNTLKLWDY-SRGKCFE 696
A T D ++ +W Y S CF+
Sbjct: 237 FAGTQDGSILVWRYNSTTSCFD 258
Score = 30.7 bits (66), Expect = 0.99
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = +1
Query: 517 YDGLCRI---WDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
Y CR W L T +D V+ + + A+ D T+++WD + G+
Sbjct: 118 YGDKCRYLHCWSKGDSFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQ 177
Query: 688 C 690
C
Sbjct: 178 C 178
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--MGISDVAWSS 237
TL HT V S+ ++L S S D +KIW A +G + HK G+ +
Sbjct: 302 TLTEHTSVVMSLICWD--QFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVLALCGVH 359
Query: 238 DSR---LIVSASDDKTLKVWELSS 300
D+ +++ + +D +L +++L S
Sbjct: 360 DAEAKPVLLCSCNDNSLHLYDLPS 383
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 66.9 bits (156), Expect = 1e-11
Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKMGISDVAWSSDSR--L 249
+V+ V +SP+G ++ + LI+++ G D + I H ++D+A+++ +R
Sbjct: 409 SVTRVAWSPDGNFIGVAFTKHLIQLYAFSGPNDLRQHTEIDAHVGAVNDLAFANPNRQLC 468
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
+++ DDK +KVW++S K T +GH Y C ++ I S + D ++ W
Sbjct: 469 VITCGDDKLIKVWDVSGRKHF-TFEGHDAPVYSICPHYKENIQFIFSTAIDGKIKAWLYD 527
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQCLKTLIDDDNP 591
A + + ++ DG+ + S +S DG + W+ + G +T +
Sbjct: 528 NLGSRVDYDAPGKWCTRMLYSADGTRLFSCGTSKDGDSFLVEWNESEGSIKRTYKEFQKK 587
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWD 672
V+F + + LA D +K WD
Sbjct: 588 LAGVVQFDTSKNHFLAVGEDGQIKFWD 614
Score = 41.5 bits (93), Expect = 5e-04
Identities = 38/205 (18%), Positives = 85/205 (41%), Gaps = 9/205 (4%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSA 261
A + S N ++ S++ K + ++ K T + +A+ D+ +I
Sbjct: 822 AAPCIALSKNDSYVMSAAGGK-VSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNVIAIG 880
Query: 262 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 441
+D T+ ++ + + LKGH + F+ N++VS D + W + T + K
Sbjct: 881 MEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWSIDTWEKRK 940
Query: 442 ------PLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPXV 597
P ++ + V F+ D L + ++ ++D + +C++ I D + +
Sbjct: 941 SVAIQMPAGKAANGDTRVQFHVD-QLRILVVHETQLAVFDASKMECIRQWIPQDSLSAPI 999
Query: 598 SFVKFSPNGKYILAATLDNTLKLWD 672
S ++ N + I D + ++D
Sbjct: 1000 SSAVYACNSQLIYTTFRDGNIGVFD 1024
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 66.9 bits (156), Expect = 1e-11
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 33/218 (15%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFE--KTISGHKMGISDVAW 231
L GH V SV ++ +G LA+ DK + IW D +F+ ++GH + V W
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW 147
Query: 232 SSDSRLIVSASDDKTLKVW----ELSSGKCLKTL----KGHSNYVFCCNFNPQSNLIVSG 387
++ S S D T+K+W E C++TL GHS+ V+ +FN + +V+
Sbjct: 148 HPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTC 207
Query: 388 SFDESVRIWD-----VRTGKCLKPLP-------AHSDPVSAVHFNRDGSLIVSSSYDGLC 531
S D +V+IW +++G+ P H + +VH++RDG +I S + D
Sbjct: 208 SDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTIYSVHWSRDG-VIASGAGDDTI 266
Query: 532 RIW-----DTASGQCLKTLIDDDNP---XVSFVKFSPN 621
+++ D+ G K L+ + V+ V+++P+
Sbjct: 267 QLFVDSDSDSVDGPSYKLLVKKEKAHEMDVNSVQWAPD 304
Score = 63.3 bits (147), Expect = 2e-10
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 43/203 (21%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIW-----------------GAYDGKF--- 183
L GHT V +V ++P + +AS SADK ++IW G++DG
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDGNTCVW 75
Query: 184 ------EKTIS---GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-----CLKTL 321
+++S GH+ + V+W++ L+ + DK++ +WE+ + + L
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVL 135
Query: 322 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIW--DVRTG--KCLKPLP----AHSDPVSAV 477
GHS V ++P +++ S S+D +++IW + G C++ L HS V ++
Sbjct: 136 TGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSI 195
Query: 478 HFNRDGSLIVSSSYDGLCRIWDT 546
FN G +V+ S D +IW T
Sbjct: 196 SFNAAGDKMVTCSDDLAVKIWKT 218
Score = 51.6 bits (118), Expect = 5e-07
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 8/167 (4%)
Frame = +1
Query: 193 ISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCNFNPQ 366
+ GH + +VAW+ + +I S S DKT+++WE SS T K GH
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHR----------- 64
Query: 367 SNLIVSGSFDESVRIWD--VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
GSFD + +W+ + + L H V +V +N GSL+ + D IW
Sbjct: 65 -----LGSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIW 119
Query: 541 DTASGQCLK----TLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ + + ++ + V V + P + + + DNT+K+W
Sbjct: 120 EIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIW 166
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 66.5 bits (155), Expect = 2e-11
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Frame = +1
Query: 100 KFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMG--ISDVAWSSDSRLIVSASDD 270
+FS +G + I+I+ G K +K I + ++D + S D R +V AS
Sbjct: 133 QFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLSPDQRNLVYASMS 192
Query: 271 KTLKVWELSSGKCLKTLK----------------GHSNYVFCCNFNPQSNLIVSGSFDES 402
+ + ++ SG G+S +F F+ +V+GS D+S
Sbjct: 193 PIVHIVDVGSGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTDGREVVAGSSDDS 252
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHF-NRDGSLIVSSSYDGLCRIWDTAS--GQCLKT- 570
+ ++D+ + AH+ V+ V F + G+LI+S S D LC++WD G+
Sbjct: 253 IYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAG 312
Query: 571 LIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
++ V+F+ +G+Y ++ D T+KLWD
Sbjct: 313 VLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWD 346
Score = 52.8 bits (121), Expect = 2e-07
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 6/165 (3%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH + V+ + +G + S+ D+ IK+W K + + + W D R
Sbjct: 314 LVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIR--KMSSSAPARHEVLRNYEW--DYR 369
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHS--NYVFCCNFNPQSNL----IVSGSFDESVR 408
+ ++ + LK + + T KGHS + C F+P + I +GS D SV
Sbjct: 370 WMDYPTEARDLKH---PLDQSVSTYKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSSVY 426
Query: 409 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
I+D+ +G + L HS PV +++ ++SSS+DG W+
Sbjct: 427 IYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWDGDLVKWE 471
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 66.1 bits (154), Expect = 2e-11
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Frame = +1
Query: 163 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 342
G+Y EK H + VA S + L++SA LKVW+ + LK+ +
Sbjct: 460 GSYFDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRE-LKSQWDVGCSL 518
Query: 343 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYD 522
++ + L+ + + D +R++DV T K ++ H+D ++ + F+ DG ++SSS D
Sbjct: 519 VKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMD 578
Query: 523 GLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLD-NTLKLW 669
G RIWD + + + D P ++ + SPN + A D N + LW
Sbjct: 579 GSLRIWDVILAKQIDG-VHVDVP-ITALSLSPNMDVLATAHSDQNGVYLW 626
Score = 57.6 bits (133), Expect = 8e-09
Identities = 32/142 (22%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Frame = +1
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
++ S + L++W +++ K L KG + V C +P +++ G D + + +++
Sbjct: 154 VLVGSQEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLD 213
Query: 430 KCLKPLP-AHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSF 603
+ + A V+A+ F+ DG L+ S G+ IW+ + + D + +
Sbjct: 214 EEIVTFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIIS 273
Query: 604 VKFSPNGKYILAATLDNTLKLW 669
+ F N +++A+ DN+LK+W
Sbjct: 274 LNFLANEPVLMSASADNSLKMW 295
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/126 (17%), Positives = 62/126 (49%)
Frame = +1
Query: 328 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV 507
H V + + L++S + +++WD + + V V ++R L+
Sbjct: 473 HDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIV-YHRVNGLLA 531
Query: 508 SSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
+ + D + R++D + + ++ + ++ + FS +GK+++++++D +L++WD K
Sbjct: 532 TVADDFVIRLYDVVTLKMVREFRGHTD-RITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
Query: 688 CFEDIY 705
+ ++
Sbjct: 591 QIDGVH 596
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/99 (22%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 303
LA+ + D +I+++ K + GH I+D+ +S D + ++S+S D +L++W++
Sbjct: 530 LATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILA 589
Query: 304 KCLKTLKGHSNY-VFCCNFNPQSNLIVSGSFDES-VRIW 414
K + + H + + + +P +++ + D++ V +W
Sbjct: 590 KQIDGV--HVDVPITALSLSPNMDVLATAHSDQNGVYLW 626
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GHT ++ + FS +G+W+ SSS D ++IW D K I G + + A S +
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIW---DVILAKQIDGVHVDVPITALSLSPNMD 611
Query: 253 VSA---SDDKTLKVW 288
V A SD + +W
Sbjct: 612 VLATAHSDQNGVYLW 626
Score = 34.7 bits (76), Expect = 0.061
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKMGISDVAWSSDS 243
H ++ S+ F N L S+SAD +K+W DG + + SGH + + S+
Sbjct: 267 HDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNG 326
Query: 244 RLIVSASDDKTLKVWEL 294
R I+SA D+ +++ +
Sbjct: 327 RHILSAGQDRAFRLFSV 343
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 66.1 bits (154), Expect = 2e-11
Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 11/207 (5%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKMGISDVAWSSDSR--L 249
+V+ V +SP+G L S LI ++ AY G + I H ++D+A++ ++
Sbjct: 411 SVTRVAWSPDGNLLGVSFTKHLIHVY-AYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMC 469
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
+V+ DDK +KVW+L SGK L T +GH Y C + I S + D ++ W
Sbjct: 470 VVTCGDDKLIKVWDL-SGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAWLYD 528
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLI----VSSSYDGLCRIWDTASGQCLKTLIDDDNP 591
A + + ++ DGS + S D W+ + G +T +
Sbjct: 529 NVGSRVDYDAPGQWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESEGALKRTYLGFRKK 588
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWD 672
V+F LA DN +K W+
Sbjct: 589 SAGVVQFDTTRNRFLAVGEDNQIKFWN 615
Score = 30.7 bits (66), Expect = 0.99
Identities = 28/133 (21%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT----ISGHKMGISD 222
+K L GH K ++ + FS L SS AD + W A + +K+ + K + D
Sbjct: 907 VKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAIQLPPGKAPVGD 966
Query: 223 --VAWSSDSRLIVSASDDKTLKVWELSSGKCLK---TLKGHSNYVFCCNFNPQSNLIVSG 387
V + +D ++ + S + L +++ S +C+ + S+ + +++ S L+ +
Sbjct: 967 TRVQFHND-QIQLLVSHETQLAIYDASKMECIHKWVPQEALSSPITSASYSCNSQLVYAS 1025
Query: 388 SFDESVRIWDVRT 426
D ++ ++D +
Sbjct: 1026 FADGNIAVFDAES 1038
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/177 (23%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 372
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 373 LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSS---YDGLC---- 531
+++GS D++ ++WDV++GK L ++ P +V F L V ++ D
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNA-PTRSVDFAVGDRLAVITTDHFVDRTAAIHV 124
Query: 532 -RIWDTASGQCLKTLI----DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
RI + Q ++++ D ++ + P + I++ D +++WD GK
Sbjct: 125 KRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGK 181
Score = 62.9 bits (146), Expect = 2e-10
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH + S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL--IVSGSF-DESVRIWD 417
+++ S D+T K+W++ SGK L T K ++ +F L I + F D + I
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDFAVGDRLAVITTDHFVDRTAAIHV 124
Query: 418 VRTGKCLKPLPAHS-----DPVSAVHFNRD--GSL---IVSSSYDGLCRIWDTASGQCLK 567
R + + A S P NR G L IVS D + RIWD +G+ LK
Sbjct: 125 KRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Query: 568 TLIDD--DNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
++ ++ + + + + L +LD T KLWD
Sbjct: 185 QSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 53.2 bits (122), Expect = 2e-07
Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 16/185 (8%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T GH AV S + L + SAD+ K+W GK T + S V ++
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRS-VDFAVGD 105
Query: 244 RLIVSASD---DKTLKVWELSSGKCLKTLKGHSNYVFCCN----------FNPQSNLIVS 384
RL V +D D+T + + + S V C + P + IVS
Sbjct: 106 RLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVS 165
Query: 385 GSFDESVRIWDVRTGKCLKPLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
G D+ +RIWD TGK LK H ++++ D S ++ S D ++WD +
Sbjct: 166 GGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTL 225
Query: 556 QCLKT 570
LKT
Sbjct: 226 TLLKT 230
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +1
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL 375
K I+ W ++ IVS +DK +++W+ +GK LK GH + +
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH 207
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 477
++GS D++ ++WD+RT LK PV+AV
Sbjct: 208 FLTGSLDKTAKLWDMRTLTLLKTYTT-VVPVNAV 240
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/177 (23%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 372
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 373 LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSS---YDGLC---- 531
+++GS D++ ++WDV++GK L ++ P +V F L V ++ D
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNA-PTRSVDFAVGDRLAVITTDHFVDRTAAIHV 124
Query: 532 -RIWDTASGQCLKTLI----DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
RI + Q ++++ D ++ + P + I++ D +++WD GK
Sbjct: 125 KRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGK 181
Score = 62.9 bits (146), Expect = 2e-10
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH + S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL--IVSGSF-DESVRIWD 417
+++ S D+T K+W++ SGK L T K ++ +F L I + F D + I
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDFAVGDRLAVITTDHFVDRTAAIHV 124
Query: 418 VRTGKCLKPLPAHS-----DPVSAVHFNRD--GSL---IVSSSYDGLCRIWDTASGQCLK 567
R + + A S P NR G L IVS D + RIWD +G+ LK
Sbjct: 125 KRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Query: 568 TLIDD--DNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
++ ++ + + + + L +LD T KLWD
Sbjct: 185 QSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 58.4 bits (135), Expect = 4e-09
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLI 252
K ++ + P + + S DK+I+IW A GK K GHK I+ + ++D
Sbjct: 149 KRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE--SVRIWDVRT 426
++ S DKT K+W++ + LKT V + +P N +V G + +V D R
Sbjct: 209 LTGSLDKTAKLWDMRTLTLLKTYTTVVP-VNAVSLSPLLNHVVLGGGQDASAVTTTDHRA 267
Query: 427 GKC------------LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 537
GK + + H P++A+ FN DG S DG R+
Sbjct: 268 GKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRL 316
Score = 53.2 bits (122), Expect = 2e-07
Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 16/185 (8%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T GH AV S + L + SAD+ K+W GK T + S V ++
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRS-VDFAVGD 105
Query: 244 RLIVSASD---DKTLKVWELSSGKCLKTLKGHSNYVFCCN----------FNPQSNLIVS 384
RL V +D D+T + + + S V C + P + IVS
Sbjct: 106 RLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVS 165
Query: 385 GSFDESVRIWDVRTGKCLKPLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
G D+ +RIWD TGK LK H ++++ D S ++ S D ++WD +
Sbjct: 166 GGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTL 225
Query: 556 QCLKT 570
LKT
Sbjct: 226 TLLKT 230
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +1
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL 375
K I+ W ++ IVS +DK +++W+ +GK LK GH + +
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH 207
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 477
++GS D++ ++WD+RT LK PV+AV
Sbjct: 208 FLTGSLDKTAKLWDMRTLTLLKTYTT-VVPVNAV 240
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/177 (23%), Positives = 89/177 (50%), Gaps = 12/177 (6%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 372
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 373 LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSS---YDGLC---- 531
+++GS D++ ++WDV++GK L ++ P +V F L V ++ D
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNA-PTRSVDFAVGDRLAVITTDHFVDRTAAIHV 124
Query: 532 -RIWDTASGQCLKTLI----DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
RI + Q ++++ D ++ + P + I++ D +++WD GK
Sbjct: 125 KRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGK 181
Score = 62.9 bits (146), Expect = 2e-10
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH + S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL--IVSGSF-DESVRIWD 417
+++ S D+T K+W++ SGK L T K ++ +F L I + F D + I
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFKFNAP-TRSVDFAVGDRLAVITTDHFVDRTAAIHV 124
Query: 418 VRTGKCLKPLPAHS-----DPVSAVHFNRD--GSL---IVSSSYDGLCRIWDTASGQCLK 567
R + + A S P NR G L IVS D + RIWD +G+ LK
Sbjct: 125 KRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Query: 568 TLIDD--DNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
++ ++ + + + + L +LD T KLWD
Sbjct: 185 QSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 58.4 bits (135), Expect = 4e-09
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLI 252
K ++ + P + + S DK+I+IW A GK K GHK I+ + ++D
Sbjct: 149 KRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE--SVRIWDVRT 426
++ S DKT K+W++ + LKT V + +P N +V G + +V D R
Sbjct: 209 LTGSLDKTAKLWDMRTLTLLKTYTTVVP-VNAVSLSPLLNHVVLGGGQDASAVTTTDHRA 267
Query: 427 GKC------------LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 537
GK + + H P++A+ FN DG S DG R+
Sbjct: 268 GKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRL 316
Score = 53.2 bits (122), Expect = 2e-07
Identities = 51/185 (27%), Positives = 76/185 (41%), Gaps = 16/185 (8%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T GH AV S + L + SAD+ K+W GK T + S V ++
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRS-VDFAVGD 105
Query: 244 RLIVSASD---DKTLKVWELSSGKCLKTLKGHSNYVFCCN----------FNPQSNLIVS 384
RL V +D D+T + + + S V C + P + IVS
Sbjct: 106 RLAVITTDHFVDRTAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVS 165
Query: 385 GSFDESVRIWDVRTGKCLKPLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
G D+ +RIWD TGK LK H ++++ D S ++ S D ++WD +
Sbjct: 166 GGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTL 225
Query: 556 QCLKT 570
LKT
Sbjct: 226 TLLKT 230
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +1
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL 375
K I+ W ++ IVS +DK +++W+ +GK LK GH + +
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH 207
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 477
++GS D++ ++WD+RT LK PV+AV
Sbjct: 208 FLTGSLDKTAKLWDMRTLTLLKTYTT-VVPVNAV 240
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/160 (23%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
+++ + S D +L+ D + + SGK + +L+GH +Y F ++P ++ +G+
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQ 310
Query: 394 DESVRIWDVRT-GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 570
D + R+WD+R + L + + + F +G + + I+DT SG L++
Sbjct: 311 DTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSG-FLQS 369
Query: 571 LIDDDNPXVSFVKFSPNGKYILAATLDNTL-KLWDYSRGK 687
D ++ + FSP+ + + D T L +Y R K
Sbjct: 370 QEIDLFGEIAGISFSPDTEALYVGVADRTYGSLLEYKRRK 409
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/116 (21%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 264
+V++ SP+G+ LA I ++ GK ++ GHK AW + ++ + +
Sbjct: 250 SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGN 309
Query: 265 DDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
D ++W++ + + LKG+ + F P+ + + V I+D ++G
Sbjct: 310 QDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSG 365
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L G+ A+ +KF+P G +LA + + I+ G + I+ +++S D+
Sbjct: 329 LKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEIDLFGEIAGISFSPDTE 388
Query: 247 LIVSASDDKT 276
+ D+T
Sbjct: 389 ALYVGVADRT 398
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 240
+L GH + + PNG LA+ + D ++W + + + G+ I + ++ +
Sbjct: 285 SLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPE 344
Query: 241 SRLIVSASDDKTLKVWELSSG 303
R + A + +++ SG
Sbjct: 345 GRFLAMAEPADFVHIFDTQSG 365
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 65.7 bits (153), Expect = 3e-11
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Frame = +1
Query: 37 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-----GAYDGKFEKTISG 201
+ PN + + T ++SS+ FSP + L ++S D ++ W GA K
Sbjct: 12 SNPNKSYEVT-PSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASIS 70
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
H + AW D + S DK K+W L SG T+ H + + P NL+
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLA 130
Query: 382 SGSFDESVRIWDVR 423
+GS+D++++ WD R
Sbjct: 131 TGSWDKTLKYWDTR 144
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/116 (25%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELS-SGKCL----KTLKGHSNYVFCCNFNPQSNLI 378
IS +++S + ++V+ S D ++ WE+S SG L K H V C + +
Sbjct: 28 ISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTV 87
Query: 379 VSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 546
SG D+ ++W + +G + H P++A+ + +L+ + S+D + WDT
Sbjct: 88 FSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDT 143
Score = 35.1 bits (77), Expect = 0.046
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +1
Query: 430 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCL----KTLIDDDNPX 594
K + P+ +D +S++ F+ ++V++S+D R W+ + SG L K I D P
Sbjct: 16 KSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQP- 74
Query: 595 VSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
V + +G + + D K+W G
Sbjct: 75 VLCSAWKDDGTTVFSGGCDKQAKMWPLLSG 104
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +1
Query: 352 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV-SSSYD 522
NF+P + D + WD + + LK + + P+ FN DGS+ ++ YD
Sbjct: 253 NFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAYAACYD 310
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 65.3 bits (152), Expect = 4e-11
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Frame = +1
Query: 196 SGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQ 366
+GHK + DVA+ S ++ S DD L +W+ +G +K K H + C ++NP
Sbjct: 278 NGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPH 337
Query: 367 -SNLIVSGSFDESVRIWDVR------TGKCLKPLPAHSDPVSAVHFNRD-GSLIVSSSYD 522
+NLI++GS D +VR++D R G + H V V ++ D S+ SS+ D
Sbjct: 338 DNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAED 397
Query: 523 GLCRIWD 543
GL IWD
Sbjct: 398 GLLNIWD 404
Score = 30.7 bits (66), Expect = 0.99
Identities = 36/124 (29%), Positives = 55/124 (44%), Gaps = 27/124 (21%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGEWLASSSA-DKLIKIW-----GAYDGKFEKT-------ISG 201
+ GH AV V++SP+ + SSA D L+ IW G + KT +G
Sbjct: 369 YKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGKKSERATKTPDGLFFQHAG 428
Query: 202 HKMGISDVAWS-SDSRLIVSASDD-------KTLKVWELS------SGKCLKTLKGHSNY 339
H+ + D WS + IVS SD+ TL++W +S + L L+ ++
Sbjct: 429 HRDKVVDFHWSLLNPWTIVSVSDNCESIGGGGTLQIWRMSDLIYRPEDEVLTELEKFKSH 488
Query: 340 VFCC 351
VF C
Sbjct: 489 VFTC 492
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 65.3 bits (152), Expect = 4e-11
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
I+ ++ S + +A+ D W++ SGK T KGHS+Y+ ++ I++GS
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 394 DESVRIWDVRTGKCLKPLPAHSDP----VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC 561
D + RIWD +TGKC+K + + VS++ + S +V L +W+ + +C
Sbjct: 222 DGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKNLA-LWNLPASEC 280
Query: 562 LKTL 573
++T+
Sbjct: 281 VQTI 284
Score = 60.5 bits (140), Expect = 1e-09
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +1
Query: 358 NPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 537
+PQS + + + D WDV +GK HSD + V S I++ S DG RI
Sbjct: 168 DPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARI 227
Query: 538 WDTASGQCLKTLIDDDNP---XVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
WD +G+C+K + D VS + + +++ N L LW+ +C + I
Sbjct: 228 WDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQGKN-LALWNLPASECVQTI 284
Score = 55.2 bits (127), Expect = 4e-08
Identities = 30/133 (22%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
++++ P + +++ D W GK + T GH + V S + I++ S+
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 268 DKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
D T ++W+ +GKC+K + K V + + +V G +++ +W++ +C
Sbjct: 222 DGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGSESWLVCGQ-GKNLALWNLPASEC 280
Query: 436 LK--PLPAHSDPV 468
++ P+PAH V
Sbjct: 281 VQTIPIPAHVQDV 293
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH----KMGISD 222
+K T GH+ + +V + + + S D +IW GK K I ++ +S
Sbjct: 193 IKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSS 252
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 321
+A +V K L +W L + +C++T+
Sbjct: 253 MALDGSESWLV-CGQGKNLALWNLPASECVQTI 284
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 64.9 bits (151), Expect = 5e-11
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Frame = +1
Query: 55 LKFTLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT---ISGHKMGISD 222
L+ +LA +T AV+ V +SP+G L + + ++ I+ + G+ + I H ++D
Sbjct: 410 LQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVND 469
Query: 223 VAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGS 390
+A+S ++ +V+ +DKT+KVW+ +G L T +GH Y C + I S +
Sbjct: 470 LAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTA 529
Query: 391 FDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQ 558
D ++ W A +++ + DG+ + S +S +G I W+ + G
Sbjct: 530 VDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGA 589
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+T + V V+F L A + +K WD
Sbjct: 590 VKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWD 627
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDES 402
A S + ++SAS K + ++ + + K + T F+PQ N I++ G D S
Sbjct: 852 ALSKNDSYVMSASGGK-ISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSS 910
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
++I++VR + L H V+ + F+ +++VSS D +W
Sbjct: 911 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW 956
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 106 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLK 282
S N ++ S+S K I ++ K T + +A+ D+ +I DD +++
Sbjct: 854 SKNDSYVMSASGGK-ISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQ 912
Query: 283 VWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
++ + + LKGH V F+ N++VS D + +W +
Sbjct: 913 IYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSM 958
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 198
+K L GH K V+ + FS L SS AD + +W + DG +EK S
Sbjct: 921 VKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW-SMDG-WEKQAS 966
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 64.9 bits (151), Expect = 5e-11
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 12/218 (5%)
Frame = +1
Query: 55 LKFTLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT---ISGHKMGISD 222
L+ +LA +T AV+ V +SP+G L + + ++ I+ + G+ + I H ++D
Sbjct: 410 LQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVND 469
Query: 223 VAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSGS 390
+A+S ++ +V+ +DKT+KVW+ +G L T +GH Y C + I S +
Sbjct: 470 LAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTA 529
Query: 391 FDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVS--SSYDGLCRI--WDTASGQ 558
D ++ W A +++ + DG+ + S +S +G I W+ + G
Sbjct: 530 VDGKIKAWLYDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCGTSKEGESFIVEWNESEGA 589
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+T + V V+F L A + +K WD
Sbjct: 590 VKRTYLGLGKRSVGVVQFDTMKNKFLVAGDEFQVKFWD 627
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS-GSFDES 402
A S + ++SAS K + ++ + + K + T F+PQ N I++ G D S
Sbjct: 852 ALSKNDSYVMSASGGK-ISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSS 910
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
++I++VR + L H V+ + F+ +++VSS D +W
Sbjct: 911 IQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW 956
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 106 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLK 282
S N ++ S+S K I ++ K T + +A+ D+ +I DD +++
Sbjct: 854 SKNDSYVMSASGGK-ISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQ 912
Query: 283 VWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
++ + + LKGH V F+ N++VS D + +W +
Sbjct: 913 IYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSM 958
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 198
+K L GH K V+ + FS L SS AD + +W + DG +EK S
Sbjct: 921 VKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVW-SMDG-WEKQAS 966
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 64.5 bits (150), Expect = 7e-11
Identities = 29/81 (35%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Frame = +1
Query: 184 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFN 360
E+ + GH+ ++ +AW+S+ L++S SDD + +W SS K L ++ GH+ +FC F
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFV 102
Query: 361 PQSN--LIVSGSFDESVRIWD 417
P+++ L+VSG+ D VR+++
Sbjct: 103 PETSDELVVSGAGDAEVRLFN 123
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
I S SDD +WE +G+ +K L G + + C +P +++ + D +++IW
Sbjct: 636 IASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIW 690
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +1
Query: 457 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYIL 636
+D A + G I S S DG IW+ +G+ +K L+ D++ ++ ++ P +
Sbjct: 621 TDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDES-VLNCIQCHPFDSVVA 679
Query: 637 AATLDNTLKLW 669
+ +DNT+K+W
Sbjct: 680 TSGIDNTIKIW 690
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Frame = +1
Query: 319 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPL-PAHSDPVSAVHFNRDG 495
L+GH V +N +L++SGS D + IW+ + K L + H+ + F +
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 496 S--LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYI--LAATLDNTLK 663
S L+VS + D R+++T+ L +DDN + + + + + LA N
Sbjct: 106 SDELVVSGAGDAEVRLFNTSR---LSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNPNV 162
Query: 664 LWDYS 678
+W S
Sbjct: 163 VWSAS 167
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 445 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSP-- 618
L H V+A+ +N +GSL++S S D IW+ +S + L ++ + KF P
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 619 NGKYILAATLDNTLKLWDYSR 681
+ + +++ D ++L++ SR
Sbjct: 106 SDELVVSGAGDAEVRLFNTSR 126
Score = 35.1 bits (77), Expect = 0.046
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGI--SDVAWSS 237
L GH V+++ ++ NG L S S D I IW K +I +GH I + +
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 238 DSRLIVSASDDKTLKVWELS 297
L+VS + D ++++ S
Sbjct: 106 SDELVVSGAGDAEVRLFNTS 125
Score = 35.1 bits (77), Expect = 0.046
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Frame = +1
Query: 7 SAPQSNKSSVAKPN-YTLKFTLAGHTKAVSSVK----FSPNGEWLASSSADKLIKIWGAY 171
S+ Q++++S +K GH + +K GE++AS S D IW
Sbjct: 592 SSSQNDRTSYQPEGAIDMKRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQ 651
Query: 172 DGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 288
G+ K + G + ++ + ++ ++ D T+K+W
Sbjct: 652 TGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIW 690
Score = 35.1 bits (77), Expect = 0.046
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TAS 552
I SGS D IW+ +TG+ +K L ++ + + S++ +S D +IW TAS
Sbjct: 636 IASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSPTAS 695
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 64.1 bits (149), Expect = 9e-11
Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 7/227 (3%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKMG--I 216
++ L L GH K VS + + L + S D+ +++W G+ + G ++G +
Sbjct: 140 SFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGEIGCVL 199
Query: 217 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
S+ W L+V + +K W + + ++L G V+ + ++L+ +G+ D
Sbjct: 200 SEGPW-----LLVGMPN--LVKAWNIET-NADQSLSGPVGQVY--SLVVGTDLLFAGTQD 249
Query: 397 ESVRIWDVRTG-KCLKP---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 564
S+ W C +P L H+ V ++ + + S S D ++W + QC+
Sbjct: 250 GSILAWRYNAATNCFEPSASLTGHTLAVVTLYVG--ANRLYSGSMDKTIKVWSLDNLQCI 307
Query: 565 KTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDIY 705
+TL D + +S + + +++L+ +LDNT+K+W G E Y
Sbjct: 308 QTLTDHSSVVMSLICWD---QFLLSCSLDNTVKIWAAIEGGNLEVTY 351
Score = 50.4 bits (115), Expect = 1e-06
Identities = 49/206 (23%), Positives = 97/206 (47%), Gaps = 13/206 (6%)
Frame = +1
Query: 115 GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 294
G WL + L+K W + ++++SG + + +D L+ + + D ++ W
Sbjct: 202 GPWLLVGMPN-LVKAWNI-ETNADQSLSGPVGQVYSLVVGTD--LLFAGTQDGSILAWRY 257
Query: 295 SSG-KCLK---TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSD 462
++ C + +L GH+ V +N + SGS D+++++W + +C++ L HS
Sbjct: 258 NAATNCFEPSASLTGHTLAVVTLYVG--ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSS 315
Query: 463 PV-SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID--DDNPXVSF--VKFSPNGK 627
V S + +++ ++S S D +IW G L+ +++ ++ V +
Sbjct: 316 VVMSLICWDQ---FLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVHDAEAKP 372
Query: 628 YILAATLDNTLKLWDY----SRGKCF 693
+L A DNTL+L+D RGK F
Sbjct: 373 VLLCACNDNTLRLYDLPSFTERGKIF 398
Score = 34.7 bits (76), Expect = 0.061
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 277 LKVWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
L W L T L GH V S+ + +GS DE++R+WD +G+C
Sbjct: 132 LHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQC 185
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +1
Query: 514 SYDGLCRI---WDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
+Y CR W L T +D VS + + + D TL++WD + G
Sbjct: 124 TYGDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASG 183
Query: 685 KC 690
+C
Sbjct: 184 QC 185
Score = 31.9 bits (69), Expect = 0.43
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-----MGISDVA 228
TL H+ V S+ ++L S S D +KIW A +G + HK + + V
Sbjct: 309 TLTDHSSVVMSLICWD--QFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVH 366
Query: 229 WSSDSRLIVSASDDKTLKVWELSS 300
+ +++ A +D TL++++L S
Sbjct: 367 DAEAKPVLLCACNDNTLRLYDLPS 390
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 64.1 bits (149), Expect = 9e-11
Identities = 67/241 (27%), Positives = 101/241 (41%), Gaps = 23/241 (9%)
Frame = +1
Query: 19 SNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI- 195
S+KS V + K T H AVSS+ S +G L S+S D+ KIW D K +I
Sbjct: 173 SSKSYVEVRRHK-KCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIE 231
Query: 196 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQS 369
H I+ + S D + + S DK +KVW K + TL H + V +
Sbjct: 232 KAHDDAINAIVVSKDG-FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDG 290
Query: 370 NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD--------GSLIVSSSYDG 525
++ SG+ D S+ +W+ + L H V A+ +R L++S S D
Sbjct: 291 KVLYSGACDRSILVWERLINGDDEEL--HMSVVGALRGHRKAIMCLAVASDLVLSGSADK 348
Query: 526 LCRIW-----DTASGQCLKTLIDDDNP----XVSFVKFSPNGKY---ILAATLDNTLKLW 669
R+W + CL L P VS N Y + + +LD +LK+W
Sbjct: 349 SLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSGSLDLSLKVW 408
Query: 670 D 672
+
Sbjct: 409 N 409
Score = 56.0 bits (129), Expect = 2e-08
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 21/146 (14%)
Frame = +1
Query: 49 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEK-------TISGH 204
++L TL H AV+++ S +G+ L S + D+ I +W +G E+ + GH
Sbjct: 268 HSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGH 327
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVW-----ELSSGKCLKTLKGHSNYVFCCNFN--- 360
+ I +A +SD L++S S DK+L+VW E CL L+GH+ V +
Sbjct: 328 RKAIMCLAVASD--LVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSD 385
Query: 361 PQSN-----LIVSGSFDESVRIWDVR 423
SN ++ SGS D S+++W++R
Sbjct: 386 SDSNSDYSCMVYSGSLDLSLKVWNLR 411
Score = 49.2 bits (112), Expect = 3e-06
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 8/211 (3%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-------YD-GKFEKTISGHKMGIS 219
TL + VSS+ S + SS+++ I++W Y G ++ G+
Sbjct: 64 TLKDKSSYVSSLAVSDKLLYTGSSNSE--IRVWPREPPFSPEYSTGDDRNVVANGNGGVK 121
Query: 220 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 399
+ D ++SA D ++VW++ + K + N + + S
Sbjct: 122 SLVILGDK--LISAHQDHKIRVWKIIDESNRRGQK-YKCVATLPTMNDRFKTLFSSKSYV 178
Query: 400 SVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
VR R KC H D VS++ ++DGSL+ S+S+D +IW T+ +CL ++
Sbjct: 179 EVR----RHKKCT--WVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEK 232
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ ++ + S +G ++ + D +K+W+
Sbjct: 233 AHDDAINAIVVSKDG-FVYTGSADKKIKVWN 262
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 595 VSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
VS + S +G + +A+ D + K+W S KC + I
Sbjct: 195 VSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSI 230
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 63.7 bits (148), Expect = 1e-10
Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
++ + S D +L+ D+ + + ++GK L TL GH ++ F ++P +G+
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQ 337
Query: 394 DESVRIWDVRT-GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 570
D++ R+WD+R K + L + + ++ + DG + + ++D ++G +
Sbjct: 338 DKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ 397
Query: 571 LIDDDNPXVSFVKFSPNGKYILAATLDNTL-KLWDYSR 681
ID +S + FSP+ + + D T L +YSR
Sbjct: 398 EIDFFG-EISGISFSPDTEALFIGVWDRTYGSLIEYSR 434
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/114 (19%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 240
TL+GH + + P+G ++ + DK ++W + K + G+ I + ++SD
Sbjct: 312 TLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRYTSD 371
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
+ + A + V+++S+G + + +F+P + + G +D +
Sbjct: 372 GKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSPDTEALFIGVWDRT 425
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 63.3 bits (147), Expect = 2e-10
Identities = 52/211 (24%), Positives = 103/211 (48%), Gaps = 11/211 (5%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT--ISGHKMG------ISDVAWS-S 237
AV+SVK++ +AS+ DK I +W +G+ T ++G G +S +++S
Sbjct: 45 AVNSVKWNHTNLVVASTGEDKKISLW-RKNGQSLGTVPVTGKDGGDSAEECLSAISFSKK 103
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
SR I S + +K+W+L C+K LKGH++ + +N + + S S + + +
Sbjct: 104 GSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHN 163
Query: 418 VRTG-KCLKPLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 591
+ +G + + + + + ++R L+V++ DG +WDT + + +
Sbjct: 164 LASGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSA 223
Query: 592 XVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
+ V FSP+ + I+ A++ KL+ Y G
Sbjct: 224 PTAGVCFSPSNEKII-ASVGMDKKLYTYDSG 253
Score = 60.1 bits (139), Expect = 1e-09
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 6/208 (2%)
Frame = +1
Query: 82 KAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 258
+ +S++ FS G ++ S +++KIW K + GH I+ V ++ + S
Sbjct: 93 ECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLAS 152
Query: 259 ASDDKTLKVWELSSGKCLKTLKGHSNYVF-CCNFNPQS-NLIVSGSFDESVRIWDVRTGK 432
S L V L+SG LK + V +++ S +L+V+ D +V +WD TG+
Sbjct: 153 VSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTVHLWDT-TGR 211
Query: 433 CLKP--LPAHSDPVSAVHFNRDGSLIVSS-SYDGLCRIWDTASGQCLKTLIDDDNPXVSF 603
K L HS P + V F+ I++S D +D+ S + + I + P S
Sbjct: 212 SPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKLYTYDSGSRRS-SSCIAYEAP-FSS 269
Query: 604 VKFSPNGKYILAATLDNTLKLWDYSRGK 687
+ F NG ++A T + + +D RGK
Sbjct: 270 LAFGDNGYILVAGTSNGRVVFYDI-RGK 296
Score = 48.0 bits (109), Expect = 6e-06
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE---KTISGHKMGISDVAWSS 237
L GHT ++ V ++ E LAS S + + G K +G + + D + SS
Sbjct: 131 LKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSS 190
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKT--LKGHSNYVFCCNFNPQS-NLIVSGSFDESVR 408
L+V+A DD T+ +W+ ++G+ K LK HS F+P + +I S D+ +
Sbjct: 191 -RHLLVTAGDDGTVHLWD-TTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKLY 248
Query: 409 IWDV---RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
+D R+ C+ A+ P S++ F +G ++V+ + +G +D
Sbjct: 249 TYDSGSRRSSSCI----AYEAPFSSLAFGDNGYILVAGTSNGRVVFYD 292
Score = 35.5 bits (78), Expect = 0.035
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Frame = +1
Query: 376 IVSGSFDESVRIWDVRTGK---C-LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
+++ S ++V+++DV C L P+ V++V +N ++ S+ D +W
Sbjct: 12 LLAASGGDTVKLFDVSADSGDPCVLSYTPSPGCAVNSVKWNHTNLVVASTGEDKKISLW- 70
Query: 544 TASGQCLKTLI-------DDDNPXVSFVKFSPNG-KYILAATLDNTLKLWDYSRGKCFED 699
+GQ L T+ D +S + FS G +YI + +K+WD R C +
Sbjct: 71 RKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKK 130
Query: 700 I 702
+
Sbjct: 131 L 131
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 63.3 bits (147), Expect = 2e-10
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 6/209 (2%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLI--KIWGAYDGKFEKTISGHKMGISDVAWSS 237
T+ GH V ++ +S + L+S S DK I + + K + GHK I + WSS
Sbjct: 246 TMEGHRLRVGALAWSSSV--LSSGSRDKSILQRDIRTQEDHVSK-LKGHKSEICGLKWSS 302
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSG--SFDESVR 408
D+R + S +D L VW S + + H+ V ++P L+ SG + D +R
Sbjct: 303 DNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIR 362
Query: 409 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTASGQCLKTLIDDD 585
W+ T L + +S + V L+ + Y +W + L TL
Sbjct: 363 FWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHS 422
Query: 586 NPXVSFVKFSPNGKYILAATLDNTLKLWD 672
V ++ SP+G+ I+ D TL+ W+
Sbjct: 423 Y-RVLYLAVSPDGQTIVTGAGDETLRFWN 450
Score = 58.4 bits (135), Expect = 4e-09
Identities = 47/207 (22%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
G + V SV ++ G LA ++ ++IW K +T+ GH++ + +AWSS ++
Sbjct: 207 GVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSSS--VL 264
Query: 253 VSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
S S DK++ ++ + + + LKGH + + ++ + + SG D + +W+ +
Sbjct: 265 SSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHST 324
Query: 430 KCLKPLPAHSDPVSAVHFN-RDGSLIVS--SSYDGLCRIWDTASGQCLKTLIDDDNPXVS 600
+ + H+ V A+ ++ L+ S + D R W+T + L + D N V
Sbjct: 325 QPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCV--DTNSQVC 382
Query: 601 FVKFSPNGKYILA--ATLDNTLKLWDY 675
+ +S N +++ N + +W Y
Sbjct: 383 NLVWSKNVNELVSTHGYSQNQIIVWKY 409
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASS---SADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
H AV ++ +SP+ L +S +AD+ I+ W + + + ++ WS +
Sbjct: 333 HAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQ-VCNLVWSKNVN 391
Query: 247 LIVSAS--DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
+VS + VW+ + L TL GHS V +P IV+G+ DE++R W+V
Sbjct: 392 ELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
Score = 31.1 bits (67), Expect = 0.75
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 171
P + TL GH+ V + SP+G+ + + + D+ ++ W +
Sbjct: 410 PTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVF 452
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 62.9 bits (146), Expect = 2e-10
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 12/218 (5%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-MGISDVAWSSD 240
TL GHT+AV +V + + + +S D ++++W +G +I+ K +G + A ++D
Sbjct: 157 TLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGL---SIAASKPLGCTIRALAAD 213
Query: 241 SRLIVSASDDKTLKVWELSSG-KCLKTLKGH----SNYVFCCNFNPQSNL------IVSG 387
++L+V+ D + W+ G + L L G + + + P ++L I SG
Sbjct: 214 TKLLVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLALDMTSIFSG 273
Query: 388 SFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 567
S+D SVRIWD + KC+K L HSD V + + +L +S D IWD +S L
Sbjct: 274 SWDMSVRIWDRSSMKCVKTL-RHSDWVWGL-APHETTLASTSGSD--VYIWDVSSETPLA 329
Query: 568 TLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSR 681
+ D + S G ++ D +K+++ R
Sbjct: 330 IIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFEIRR 367
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 11/142 (7%)
Frame = +1
Query: 310 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KPL-----PAHSDP 465
+ TL GH+ V + L+ + +D VR+WD+ G + KPL +D
Sbjct: 155 IDTLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAADT 214
Query: 466 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT---LIDDDNPXVSFVKFSPNGKYIL 636
V DG + S DGL ++D Q KT L + P S + I
Sbjct: 215 KLLVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLALDMTS---IF 271
Query: 637 AATLDNTLKLWDYSRGKCFEDI 702
+ + D ++++WD S KC + +
Sbjct: 272 SGSWDMSVRIWDRSSMKCVKTL 293
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 62.9 bits (146), Expect = 2e-10
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------------GHKMGISD 222
AVS K S N + A S D + ++ + KF + + H I D
Sbjct: 74 AVSFCKTSRNSQLFAVSDEDGHVSLFNSSSKKFASSATHQENTEKARFRDWIAHYNAIFD 133
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSGSFDE 399
++W +++AS D+T+KVW++ KC L GH+ V C+ S+L+VSGS D
Sbjct: 134 ISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDG 193
Query: 400 SVRIWDVR 423
+WD+R
Sbjct: 194 CFALWDLR 201
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 328 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGS-LI 504
H N +F ++ + +++ S D+++++WDV KC L H+ V ++ + S L+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 505 VSSSYDGLCRIWD 543
VS S DG +WD
Sbjct: 187 VSGSRDGCFALWD 199
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 106 SPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWS-SDSRLIVSASDDKTL 279
SP+GE++ S S+D IW + + I GH ++ V WS S+ + +ASDD T+
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTV 406
Query: 280 KVWELSSGKC 309
++W + + C
Sbjct: 407 RLWNIENNIC 416
Score = 39.9 bits (89), Expect = 0.002
Identities = 51/243 (20%), Positives = 92/243 (37%), Gaps = 41/243 (16%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV-AWSSDSRLI 252
H A+ + + L ++S D+ IK+W + K + GH + + + ++S L+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 253 VSASDDKTLKVWEL----SSGK---CLKT---LKG----------------HSNYVFCCN 354
VS S D +W+L SS K C+ + +KG S+
Sbjct: 187 VSGSRDGCFALWDLRCKSSSHKEEFCINSTGMVKGAHLSPLSKRIRRRKAASSSITSVLY 246
Query: 355 FNPQSNLIVSGSFDESVRIWDVRTGKC-LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 531
+ + +G+ D +++ WD+R K SDP + G + +S G
Sbjct: 247 VKDEITIATAGAPDSALKFWDIRKLKAPFAQASPQSDPTNTKEKRSHGIVSLSQDSSGTY 306
Query: 532 RIWDTASGQ--CLKTLIDDDNPXVSF-----------VKFSPNGKYILAATLDNTLKLWD 672
+ TL D P SF SP+G+Y+L+ + D +W
Sbjct: 307 LTASCKDNRIYLYNTLRLDKGPVQSFSGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQ 366
Query: 673 YSR 681
++
Sbjct: 367 VNK 369
Score = 34.3 bits (75), Expect = 0.080
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +1
Query: 490 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPN--GKYILAATLDNTLK 663
DG ++S S DG IW Q ++ + V+ V +SP+ GK + A+ D T++
Sbjct: 349 DGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGK-VATASDDFTVR 407
Query: 664 LWDYSRGKC 690
LW+ C
Sbjct: 408 LWNIENNIC 416
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 358 NPQSNLIVSGSFDESVRIWDVRTGKCLKP--LPAHSDPVSAVHFN-RDGSLIVSSSYDGL 528
+P ++SGS D + IW V + + P L H V+AV ++ + + ++S D
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQ-VDPIILKGHDFEVTAVDWSPSEIGKVATASDDFT 405
Query: 529 CRIWDTASGQC 561
R+W+ + C
Sbjct: 406 VRLWNIENNIC 416
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Frame = +1
Query: 328 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV 507
H++ V C + N + L+ S S+D ++++W + KCL+ +PAH D V++V + +++
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAIVF 263
Query: 508 SSSYDGLCRIW--DTASGQCLKTL---IDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
S S DG + W D TL + V+ + S NG + + D + W+
Sbjct: 264 SGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWE 323
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/162 (23%), Positives = 79/162 (48%), Gaps = 6/162 (3%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
H +S ++ + + L+ SAS D+T+KVW ++ KCL+++ H + V ++ ++
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEA-IVF 263
Query: 382 SGSFDESVRIWD-VRTGK-----CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
SGS D +V+ W + GK ++ L V+A+ +++G+ + S DGL W+
Sbjct: 264 SGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWE 323
Query: 544 TASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
++ V ++ + G + + + D T+ +W
Sbjct: 324 REKQLNYGGILKGHKLAVLCLEVA--GSLVFSGSADKTICVW 363
Score = 50.4 bits (115), Expect = 1e-06
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 20/221 (9%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
H AVS + + L S+S D+ IK+W D K ++I H ++ V S+ ++
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEAIVF 263
Query: 256 SASDDKTLKVWEL-SSGK-----CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
S S D T+K W+ GK ++TL + V + + GS D V W+
Sbjct: 264 SGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAVYFGSSDGLVNFWE 323
Query: 418 ----VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLID 579
+ G LK H ++ + GSL+ S S D +W D CL L
Sbjct: 324 REKQLNYGGILK---GHK--LAVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTG 378
Query: 580 DDNPXVSFVKFSP-------NGKYIL-AATLDNTLKLWDYS 678
P + + K+I+ + +LD ++K+W S
Sbjct: 379 HTGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVWGVS 419
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 62.5 bits (145), Expect = 3e-10
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 11/170 (6%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTIS------GHKMGISDV 225
L GH K + +SP E +L S S D+ I +W +K ++ GH+ I+DV
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV 223
Query: 226 AWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDE 399
+W + L SA +D L +W+ + + +K H V +FNP + ++ + S D
Sbjct: 224 SWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDS 283
Query: 400 SVRIWDVR-TGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWD 543
+V ++D+R L + +H V V ++ +++ SS D +WD
Sbjct: 284 TVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 333
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 18/95 (18%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG--------------AYDGKFEKTIS- 198
++ H V V++ PN E LASS D+ + +W A DG E S
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359
Query: 199 -GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELS 297
GHK ISD AW+ ++ +I S ++D +L+VW+++
Sbjct: 360 GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA 394
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 61.7 bits (143), Expect = 5e-10
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Frame = +1
Query: 199 GHKMGISDVAWSSDS-RLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQS 369
GH+ + DVA+S S + S DD L +W+ +G K K H + C ++NP
Sbjct: 290 GHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHD 349
Query: 370 -NLIVSGSFDESVRIWDVR------TGKCLKPLPAHSDPVSAVHFNRDGSLIV-SSSYDG 525
NLI++GS D +VR++D R G + H V V ++ D S + SS+ DG
Sbjct: 350 DNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDG 409
Query: 526 LCRIWD 543
L IWD
Sbjct: 410 LLNIWD 415
Score = 34.3 bits (75), Expect = 0.080
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGEWLASSSA-DKLIKIWGAYDGKFEKT-------------IS 198
+ GH AV V++SP+ + SSA D L+ IW YD +K+ +
Sbjct: 380 YKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWD-YDRVSKKSDRAAKSPAGLFFQHA 438
Query: 199 GHKMGISDVAW-SSDSRLIVSASDD-------KTLKVWELS 297
GH+ + D W +SD IVS SDD TL++W +S
Sbjct: 439 GHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMS 479
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 60.9 bits (141), Expect = 8e-10
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 6/199 (3%)
Frame = +1
Query: 97 VKFSPNGEWLASSSADKLIKIWGAYDGKF----EKTISGHKMGISDVAWSSDSRLIVSAS 264
+ F P+ +A+ D + ++ YD E+ + HK V + D + IV+AS
Sbjct: 12 IDFHPSTNLVAAGLIDGHLHLY-RYDSDSSLVRERKVRAHKESCRAVRFIDDGQRIVTAS 70
Query: 265 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKP 444
D ++ ++ +G + L+ N I SG V+IWD R C
Sbjct: 71 ADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIWDTRQRSCSHE 130
Query: 445 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD--TASGQCLKTLIDDDNPXVSFVKFSP 618
AH D +S + F D +V +S DG + + T+ Q +D+ V +K
Sbjct: 131 FNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVIMK--- 187
Query: 619 NGKYILAATLDNTLKLWDY 675
NG+ ++ T + TL L+ +
Sbjct: 188 NGRKVICGTQNGTLLLYSW 206
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/151 (19%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWSSDSRLI 252
H ++ +V+F +G+ + ++SAD I G + + H+ ++ + +++ I
Sbjct: 50 HKESCRAVRFIDDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTET-TI 108
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 432
S D +K+W+ C H +Y+ F S +V S D ++ + ++RT K
Sbjct: 109 ASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSK 168
Query: 433 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
D + +V ++G ++ + +G
Sbjct: 169 VQSQSEFSEDELLSVVIMKNGRKVICGTQNG 199
Score = 36.7 bits (81), Expect = 0.015
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Frame = +1
Query: 343 FCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL---KPLPAHSDPVSAVHFNRDGSLIVSS 513
F +F+P +NL+ +G D + ++ + L + + AH + AV F DG IV++
Sbjct: 10 FGIDFHPSTNLVAAGLIDGHLHLYRYDSDSSLVRERKVRAHKESCRAVRFIDDGQRIVTA 69
Query: 514 SYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
S D D +G + L + V+ + + I + +K+WD + C
Sbjct: 70 SADCSILATDVETGAQVAHLENAHEDAVNTL-INVTETTIASGDDKGCVKIWDTRQRSC 127
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 60.9 bits (141), Expect = 8e-10
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 9/181 (4%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
H AVS + + + L S S DK +K+W D K ++I H ++ V D L+
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVF 302
Query: 256 SASDDKTLKVWELS-SGKCLK-----TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
+ S D TLKVW+ GK +K L N V N ++ GS D +V W+
Sbjct: 303 TGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWE 362
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLIDDDN 588
R H ++ + GSL++S D +W S CL L+D +
Sbjct: 363 -RQKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKRNGDGSHTCLSVLMDHEG 421
Query: 589 P 591
P
Sbjct: 422 P 422
Score = 58.4 bits (135), Expect = 4e-09
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 6/162 (3%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
H +S ++ + D L+ S S DKTLKVW LS KCL++++ H + V + +L+
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDLVF 302
Query: 382 SGSFDESVRIWDVRT-GKCLK-----PLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
+GS D ++++W GK +K L + V+A+ N +++ S DG W+
Sbjct: 303 TGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWE 362
Query: 544 TASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
K I ++ + + G +L+ D + +W
Sbjct: 363 RQKYLTHKGTIHGHR--MAVLCLATAGSLLLSGGADKNICVW 402
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Frame = +1
Query: 328 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV 507
H + V C + N L+ SGS+D+++++W + KCL+ + AH D V+ V D L+
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFD-DLVF 302
Query: 508 SSSYDGLCRIWD-TASGQCLK-----TLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ S DG ++W G+ +K L+ +N V+ + + + + D T+ W
Sbjct: 303 TGSADGTLKVWKREVQGKEMKHVLVQVLMKQEN-AVTALAVNLTDAVVYCGSSDGTVNFW 361
Query: 670 D 672
+
Sbjct: 362 E 362
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 60.5 bits (140), Expect = 1e-09
Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Frame = +1
Query: 142 DKLIKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 315
D + +W A G + TI K ++ + W+ D R + ++ +++W+ +S + L+
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 316 TLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-TGKCLKPLPAHSDPVSAVHFNR 489
TLK GH + V +N ++++ +G D + DVR ++ H+ V + ++
Sbjct: 219 TLKGGHQSRVGSLAWN--NHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSG 276
Query: 490 DGSLIVSSSYDGLCRIWDTASGQCLKTL-----IDDDNPXVSFVKFSPNGKYILA---AT 645
G + S D + IWD + T +++ V + + P +LA
Sbjct: 277 SGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGG 336
Query: 646 LDNTLKLWDYSRGKCFEDI 702
D T+K W+ G C +
Sbjct: 337 GDRTIKFWNTHTGACLNSV 355
Score = 58.8 bits (136), Expect = 3e-09
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 11/220 (5%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFEKTISGHKMGISD 222
N L+ GH V S+ + N L + D LI +T GH +
Sbjct: 214 NRQLRTLKGGHQSRVGSLAW--NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCG 271
Query: 223 VAWSSDSRLIVSASDDKTLKVWELS------SGKCLKTLKGHSNYVFCCNFNP-QSNLIV 381
+ WS + + S +D + +W+ S + + L L+ H++ V + P Q+NL+
Sbjct: 272 LKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLA 331
Query: 382 SGSF--DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTAS 552
+G D +++ W+ TG CL + S S + + L+ S + +W S
Sbjct: 332 TGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPS 391
Query: 553 GQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ L + V ++ SP+G + +A D TL+ W+
Sbjct: 392 MVKMAELTGHTS-RVLYMAQSPDGCTVASAAGDETLRFWN 430
Score = 55.6 bits (128), Expect = 3e-08
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSDSRLIVSAS 264
V+S+ ++P+G +A + +++W + + +T+ GH+ + +AW++ L
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHI-LTTGGM 243
Query: 265 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD------VRT 426
D + ++T +GH+ V ++ + SG D V IWD T
Sbjct: 244 DGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNST 303
Query: 427 GKCLKPLPAHSDPVSAVHF-NRDGSLIVSSSYDG--LCRIWDTASGQCLKTLIDDDNPXV 597
+ L L H+ V A+ + +L+ + G + W+T +G CL ++ D V
Sbjct: 304 TQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSV--DTGSQV 361
Query: 598 SFVKFSPNGKYILAA--TLDNTLKLWDY 675
+ +S N + +L++ N L LW Y
Sbjct: 362 CSLLWSKNERELLSSHGFTQNQLTLWKY 389
Score = 52.4 bits (120), Expect = 3e-07
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Frame = +1
Query: 31 SVAKPNYTLKFT--LAGHTKAVSSVKFSP-NGEWLASSSA--DKLIKIWGAYDGKFEKTI 195
SVA N T ++ L HT AV ++ + P LA+ D+ IK W + G ++
Sbjct: 296 SVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSV 355
Query: 196 SGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 369
+ + WS + R ++S+ L +W+ S + L GH++ V +P
Sbjct: 356 DTGSQ-VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDG 414
Query: 370 NLIVSGSFDESVRIWDV----RTGKCLKPLPAHSDPVSAVHFNR 489
+ S + DE++R W+V T K P A S+P S H NR
Sbjct: 415 CTVASAAGDETLRFWNVFGVPETAKKAAP-KAVSEPFS--HVNR 455
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 3/163 (1%)
Frame = +1
Query: 229 WSSDSRLIVSASDDKTLKVWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
W S + L ++ D T+ +W+ S+G L T+ V N+ P + G +
Sbjct: 148 WGSANVLAIAL--DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSE 205
Query: 403 VRIWDVRTGKCLKPLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
V++WD + + L+ L H V ++ +N ++ + DGL D +
Sbjct: 206 VQLWDSASNRQLRTLKGGHQSRVGSLAWNNH--ILTTGGMDGLIINNDVRIRSPIVETYR 263
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDIYW 708
V +K+S +G+ + + DN + +WD S W
Sbjct: 264 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQW 306
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 60.5 bits (140), Expect = 1e-09
Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Frame = +1
Query: 142 DKLIKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 315
D + +W A G + TI K ++ + W+ D R + ++ +++W+ +S + L+
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 316 TLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-TGKCLKPLPAHSDPVSAVHFNR 489
TLK GH + V +N ++++ +G D + DVR ++ H+ V + ++
Sbjct: 209 TLKGGHQSRVGSLAWN--NHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCGLKWSG 266
Query: 490 DGSLIVSSSYDGLCRIWDTASGQCLKTL-----IDDDNPXVSFVKFSPNGKYILA---AT 645
G + S D + IWD + T +++ V + + P +LA
Sbjct: 267 SGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGG 326
Query: 646 LDNTLKLWDYSRGKCFEDI 702
D T+K W+ G C +
Sbjct: 327 GDRTIKFWNTHTGACLNSV 345
Score = 58.8 bits (136), Expect = 3e-09
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 11/220 (5%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFEKTISGHKMGISD 222
N L+ GH V S+ + N L + D LI +T GH +
Sbjct: 204 NRQLRTLKGGHQSRVGSLAW--NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCG 261
Query: 223 VAWSSDSRLIVSASDDKTLKVWELS------SGKCLKTLKGHSNYVFCCNFNP-QSNLIV 381
+ WS + + S +D + +W+ S + + L L+ H++ V + P Q+NL+
Sbjct: 262 LKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLA 321
Query: 382 SGSF--DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTAS 552
+G D +++ W+ TG CL + S S + + L+ S + +W S
Sbjct: 322 TGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFTQNQLTLWKYPS 381
Query: 553 GQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+ L + V ++ SP+G + +A D TL+ W+
Sbjct: 382 MVKMAELTGHTS-RVLYMAQSPDGCTVASAAGDETLRFWN 420
Score = 55.6 bits (128), Expect = 3e-08
Identities = 47/208 (22%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSDSRLIVSAS 264
V+S+ ++P+G +A + +++W + + +T+ GH+ + +AW++ L
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHI-LTTGGM 233
Query: 265 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD------VRT 426
D + ++T +GH+ V ++ + SG D V IWD T
Sbjct: 234 DGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNST 293
Query: 427 GKCLKPLPAHSDPVSAVHF-NRDGSLIVSSSYDG--LCRIWDTASGQCLKTLIDDDNPXV 597
+ L L H+ V A+ + +L+ + G + W+T +G CL ++ D V
Sbjct: 294 TQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSV--DTGSQV 351
Query: 598 SFVKFSPNGKYILAA--TLDNTLKLWDY 675
+ +S N + +L++ N L LW Y
Sbjct: 352 CSLLWSKNERELLSSHGFTQNQLTLWKY 379
Score = 51.2 bits (117), Expect = 7e-07
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Frame = +1
Query: 31 SVAKPNYTLKFT--LAGHTKAVSSVKFSP-NGEWLASSSA--DKLIKIWGAYDGKFEKTI 195
SVA N T ++ L HT AV ++ + P LA+ D+ IK W + G ++
Sbjct: 286 SVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSV 345
Query: 196 SGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 369
+ + WS + R ++S+ L +W+ S + L GH++ V +P
Sbjct: 346 DTGSQ-VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDG 404
Query: 370 NLIVSGSFDESVRIWDV----RTGKCLKPLPAHSDPVSAVHFNR 489
+ S + DE++R W+V T K P A ++P S H NR
Sbjct: 405 CTVASAAGDETLRFWNVFGVPETAKKAAP-KAVAEPFS--HVNR 445
Score = 46.0 bits (104), Expect = 2e-05
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 3/163 (1%)
Frame = +1
Query: 229 WSSDSRLIVSASDDKTLKVWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
W S + L ++ D T+ +W+ S+G L T+ V N+ P + G +
Sbjct: 138 WGSANVLAIAL--DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSE 195
Query: 403 VRIWDVRTGKCLKPLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
V++WD + + L+ L H V ++ +N ++ + DGL D +
Sbjct: 196 VQLWDSASNRQLRTLKGGHQSRVGSLAWNNH--ILTTGGMDGLIINNDVRIRSPIVETYR 253
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDIYW 708
V +K+S +G+ + + DN + +WD S W
Sbjct: 254 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQW 296
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 60.5 bits (140), Expect = 1e-09
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Frame = +1
Query: 163 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGHSNY 339
G Y ++GH+ I + WS D IVS SDD++ ++WE+ S + + L GHS
Sbjct: 221 GHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVR 280
Query: 340 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAH-SDPVSAVHFNRDGSLIVSSS 516
V+ C + +LIV+ D + R+W V G L+ + H + ++ + SL+V++
Sbjct: 281 VWDCCIS--DSLIVTAGEDCTCRVWGV-DGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAG 337
Query: 517 YDGLCRI 537
+D ++
Sbjct: 338 FDSAIKV 344
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSDS 243
L GH ++ + +S +G + S S D+ +IW + + GH + + D SDS
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCC-ISDS 289
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDESVRI 411
LIV+A +D T +VW + G L+ +K H ++ C ++P S+L+V+ FD ++++
Sbjct: 290 -LIVTAGEDCTCRVWGV-DGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKV 344
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +1
Query: 445 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNG 624
L H + + ++ DGS IVS S D RIW+ S + + ++ + V S +
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDS- 289
Query: 625 KYILAATLDNTLKLW 669
I+ A D T ++W
Sbjct: 290 -LIVTAGEDCTCRVW 303
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 60.5 bits (140), Expect = 1e-09
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Frame = +1
Query: 163 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGHSNY 339
G Y ++GH+ I + WS D IVS SDD++ ++WE+ S + + L GHS
Sbjct: 221 GHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVR 280
Query: 340 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAH-SDPVSAVHFNRDGSLIVSSS 516
V+ C + +LIV+ D + R+W V G L+ + H + ++ + SL+V++
Sbjct: 281 VWDCCIS--DSLIVTAGEDCTCRVWGV-DGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAG 337
Query: 517 YDGLCRI 537
+D ++
Sbjct: 338 FDSAIKV 344
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSDS 243
L GH ++ + +S +G + S S D+ +IW + + GH + + D SDS
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCC-ISDS 289
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDESVRI 411
LIV+A +D T +VW + G L+ +K H ++ C ++P S+L+V+ FD ++++
Sbjct: 290 -LIVTAGEDCTCRVWGV-DGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIKV 344
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +1
Query: 445 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNG 624
L H + + ++ DGS IVS S D RIW+ S + + ++ + V S +
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCISDS- 289
Query: 625 KYILAATLDNTLKLW 669
I+ A D T ++W
Sbjct: 290 -LIVTAGEDCTCRVW 303
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/149 (21%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
++ + S D +L+ D+ + + ++GK L+TL GH ++ F ++P +G+
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQ 339
Query: 394 DESVRIWDVRT-GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 570
D++ R+WD+R + + L + + ++ + DG + + ++D ++G +
Sbjct: 340 DKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNGYETEQ 399
Query: 571 LIDDDNPXVSFVKFSPNGKYILAATLDNT 657
ID +S + FSP+ + + D T
Sbjct: 400 EIDFFG-EISGISFSPDTEALFIGVWDRT 427
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/111 (24%), Positives = 52/111 (46%)
Frame = +1
Query: 352 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 531
+ +P L+ + I D TGK L+ L H D A ++ DG + + D C
Sbjct: 284 SLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTC 343
Query: 532 RIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
R+WD + T++ + + ++++ +GKY+ A + + ++D S G
Sbjct: 344 RVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNG 394
Score = 35.9 bits (79), Expect = 0.026
Identities = 22/114 (19%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSD 240
TL+GH + + P+G ++ + DK ++W + T+ G+ I + ++SD
Sbjct: 314 TLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSD 373
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
+ + A + V+++S+G + + +F+P + + G +D +
Sbjct: 374 GKYMAMAEPADFVHVYDVSNGYETEQEIDFFGEISGISFSPDTEALFIGVWDRT 427
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 60.1 bits (139), Expect = 1e-09
Identities = 54/162 (33%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DS 243
LAG +K S S +ASS+ D +++IW + + HK + + SS D
Sbjct: 580 LAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADP 639
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDV 420
L+ S SDD T G + T+K +N V C F S + GS D V +D+
Sbjct: 640 TLLASGSDDGT--------GVSIGTIKTKAN-VCCVQFPSDSGRSLAFGSADHKVYYYDL 690
Query: 421 RTGKC-LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
R K L + HS VS V F D S +VSSS D ++WD
Sbjct: 691 RNPKIPLCTMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLWD 731
Score = 49.2 bits (112), Expect = 3e-06
Identities = 50/214 (23%), Positives = 95/214 (44%), Gaps = 10/214 (4%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-------DGKFEKTISGHKMGISDV 225
L + V ++ F GE A++ +K IKI+ D + + +S +
Sbjct: 530 LLNSSNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSL 589
Query: 226 AWSSDSRLIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDE 399
W+S + +++S+ D +++W+++ + + +K H V+ + + L+ SGS D
Sbjct: 590 CWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDG 649
Query: 400 SVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLI 576
TG + + ++ V V F D G + S D +D + + +
Sbjct: 650 --------TGVSIGTIKTKAN-VCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTM 700
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYS 678
+ VS+VKF + + ++T DNTLKLWD S
Sbjct: 701 IGHSKTVSYVKFVDSSTLVSSST-DNTLKLWDLS 733
Score = 43.6 bits (98), Expect = 1e-04
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Frame = +1
Query: 79 TKA-VSSVKF-SPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHKMGISDVAWSSDSRL 249
TKA V V+F S +G LA SAD + + + K T+ GH +S V + DS
Sbjct: 659 TKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFV-DSST 717
Query: 250 IVSASDDKTLKVWELS---SG---KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
+VS+S D TLK+W+LS SG L + GH+N + I +GS V +
Sbjct: 718 LVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIATGSETNEVFV 777
Query: 412 W 414
+
Sbjct: 778 Y 778
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 162
T+ GH+K VS VKF + L SSS D +K+W
Sbjct: 699 TMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLW 730
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS-----DVAWSSDSRL 249
AV+SVKF+ NG + +S AD+L + H +S DVA S L
Sbjct: 481 AVTSVKFACNGRKMLTSGADRLQMFDVNRKASSVRLSPSHTQTLSHGTIYDVAVDPTSGL 540
Query: 250 IVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
+V+ DK + ++++ SGK +++ K H + V +P N +V + ++ D
Sbjct: 541 VVTVGQDKKINIFDIESGKLVRSFKQDRDHGDPVKVI-LDPSCNYLVCSYSNRTICFVDF 599
Query: 421 RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
TG+ + H + V+ V F D I+S + DG +W
Sbjct: 600 VTGELVAQATGHGEAVTGVIFLPDCKHIISVASDGCIFVW 639
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +1
Query: 97 VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKT 276
V P+ +L S +++ I G+ +GH ++ V + D + I+S + D
Sbjct: 576 VILDPSCNYLVCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPDCKHIISVASDGC 635
Query: 277 LKVWEL 294
+ VW+L
Sbjct: 636 IFVWKL 641
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSD 240
+L GHT+ VSSV + P + + SSS D ++ W GK + G + DV S
Sbjct: 267 SLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGES- 324
Query: 241 SRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVR 408
S LI + D L+VW+ + + HS+++ C ++ S ++S S+D +
Sbjct: 325 SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 409 IWDVRTGKCLKPLPAHSDPV 468
+WD+RT K HS P+
Sbjct: 385 LWDLRTAVMTK--HTHSFPL 402
Score = 56.4 bits (130), Expect = 2e-08
Identities = 55/206 (26%), Positives = 89/206 (43%), Gaps = 4/206 (1%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L GH +V SV +G + SSS D I +W E T G + + ++
Sbjct: 201 LRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTN----ESTSEGESVSVKKRKGNNQ-- 254
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
A + + S G+ + +L GH+ V + P+ ++I S S+D SVR WDV T
Sbjct: 255 ----AEESQ-------SEGEAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVET 302
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTAS-GQCLKTL-IDDDNPXV 597
GK L ++ V + S LI + D + R+WD G + +
Sbjct: 303 GKDSLNLFC-GKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWI 361
Query: 598 SFVKFSPNGKY-ILAATLDNTLKLWD 672
S K+ + + +L+A+ D + LWD
Sbjct: 362 SACKWHKSSWFHLLSASYDGKIMLWD 387
Score = 41.1 bits (92), Expect = 7e-04
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Frame = +1
Query: 184 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS---NYVFCCN 354
E+ S H +S V SS R I++ D +VW S+G C L+GHS + V N
Sbjct: 103 EEEPSLHDDWVSAVNGSSP-RFILTGCYDGLGRVWS-SAGSCSHILEGHSGAISSVALVN 160
Query: 355 FNPQSNLIVS-GSFDESVRIW--------DVRTG-KCLKPLPAHSDPVSAVHFNRDGSLI 504
N + V+ S D ++R++ D T + K L H V +V + G+++
Sbjct: 161 SNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMV 220
Query: 505 VSSSYDGLCRIWDT 546
SSS+D +W+T
Sbjct: 221 CSSSWDCTINLWNT 234
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 454 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGK-- 627
H D VSAV+ I++ YDGL R+W +A G C L S + N
Sbjct: 109 HDDWVSAVN-GSSPRFILTGCYDGLGRVWSSA-GSCSHILEGHSGAISSVALVNSNDAET 166
Query: 628 -YILAATLDNTLKLWDY 675
+ A+ D TL+L+ +
Sbjct: 167 VTVATASKDRTLRLFKF 183
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 58.0 bits (134), Expect = 6e-09
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS- 369
I+G + W + + ++ S S+DK +KVW++++GKC T++ H V +N +
Sbjct: 212 IAGQTLFFLTFNWENRN-IVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTP 270
Query: 370 NLIVSGSFDESVRIWDVR--TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
+++SGS D +V + D R + LK A + + S +VS DG + +D
Sbjct: 271 EVLLSGSRDRTVVLKDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLK-DGTVKGFD 329
Query: 544 T-ASGQCLKTLIDDDNPXVSFVKFSPNGKYILA-ATLDNTLKLWDYSRGK 687
T AS +I + VS + ++ + +LA + D ++KLWD S +
Sbjct: 330 TRASDLSPSFIIHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSNNQ 379
Score = 52.0 bits (119), Expect = 4e-07
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Frame = +1
Query: 112 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKT--LK 282
N +AS S DK +K+W GK + T+ H+ + VAW++ +++S S D+T LK
Sbjct: 226 NRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLK 285
Query: 283 VWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKP---LPA 453
S LK + + + + +VS D +V+ +D R L P + A
Sbjct: 286 DGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLK-DGTVKGFDTRASD-LSPSFIIHA 343
Query: 454 HSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTASGQ 558
H VS++ +N +L+ + S D ++WD ++ Q
Sbjct: 344 HDSEVSSISYNIHAPNLLATGSADESVKLWDLSNNQ 379
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Frame = +1
Query: 268 DKTLKVWELSSGK----CLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGK 432
+ ++++W+L C++ + +F FN ++ N++ SGS D+ V++WDV TGK
Sbjct: 189 ESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKVKVWDVATGK 248
Query: 433 CLKPLPAHSDPVSAVHFNR-DGSLIVSSSYD 522
C + H V AV +N +++S S D
Sbjct: 249 CKVTMEHHEKKVHAVAWNNYTPEVLLSGSRD 279
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDS-RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 369
I H +S ++++ + L+ + S D+++K+W+LS+ + N V N N
Sbjct: 341 IHAHDSEVSSISYNIHAPNLLATGSADESVKLWDLSNNQPSWIATNKPNAVRAMNKNFCC 400
Query: 370 NLIVSGSF 393
++ VSG F
Sbjct: 401 HMFVSGFF 408
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 58.0 bits (134), Expect = 6e-09
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 11/170 (6%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTIS------GHKMGISDV 225
L GH + + +S E +L S S D+ I +W +K ++ GH+ I DV
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDV 224
Query: 226 AWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDE 399
AW + + SA DD L +W+L + + +K H + +FNP + ++ + S D
Sbjct: 225 AWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDS 284
Query: 400 SVRIWDVRTGKC-LKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWD 543
+V ++D+R L L H V V ++ +++ SS D +WD
Sbjct: 285 TVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 334
Score = 44.4 bits (100), Expect = 8e-05
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 18/95 (18%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG--------------AYDGKFEKTIS- 198
L+ H V V++ PN E LASS D+ + +W A DG E S
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 199 -GHKMGISDVAWSSDSRLIVSA-SDDKTLKVWELS 297
GHK ISD AW+ D ++S+ ++D +L+VW+++
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMA 395
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 58.0 bits (134), Expect = 6e-09
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Frame = +1
Query: 196 SGHKMGISDVAWSSDSRLIVSASDDKTL-KVWELSSGKCLKT---LKGHSNYVFCCNFNP 363
SGHK + WS + + + D K++ +WE +SG GH+ V ++P
Sbjct: 220 SGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQWSP 279
Query: 364 -QSNLIVSGSFDESVRIWDVRTGKC-LKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCR 534
+ N+ S S D SV +WD+R GK AH+ V+ + +NR S ++ S S DG
Sbjct: 280 AEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTFS 339
Query: 535 IWD---TASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATL-DNTLKLWDYSRGKCFED 699
I D G + + ++ +++S + LA T DN L +WD S K E+
Sbjct: 340 IRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEKDEEE 398
Score = 41.9 bits (94), Expect = 4e-04
Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 8/129 (6%)
Frame = +1
Query: 70 AGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEK-TISGHKMGISDVAWSS-D 240
AGHT +V +++SP E AS S D + +W GK + H ++ ++W+
Sbjct: 266 AGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLA 325
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY----VFCCNFNP-QSNLIVSGSFDESV 405
S ++ S SDD T + +L K + H Y + ++ +++ + S D +
Sbjct: 326 SCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGDNQL 385
Query: 406 RIWDVRTGK 432
IWD+ K
Sbjct: 386 TIWDLSLEK 394
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 57.6 bits (133), Expect = 8e-09
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Frame = +1
Query: 184 EKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCC 351
++ H+ + DVAW L S DD+ L +W+L S+ K ++++ HS V C
Sbjct: 220 QQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCL 279
Query: 352 NFNPQSNLIV-SGSFDESVRIWDVR-TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
FNP + +V +GS D++V+++D+R L +H + V V +N I++S G
Sbjct: 280 AFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLG 339
Query: 526 -LCRIWDTASGQCLKTLID-DDNP 591
+WD + +T+ D +D P
Sbjct: 340 RRLMVWDLSRIDEEQTVEDAEDGP 363
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWS- 234
++ H+ V+ + F+P EW +A+ S DK +K++ T HK + V W+
Sbjct: 268 SVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNP 327
Query: 235 SDSRLIVSASDDKTLKVWELS 297
+ ++ S + L VW+LS
Sbjct: 328 KNETILASCCLGRRLMVWDLS 348
Score = 35.5 bits (78), Expect = 0.035
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Frame = +1
Query: 319 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPL------PAHSDPVSAV 477
L+GHS+ + +++ + ++SGS D + +WD+ K L AH V V
Sbjct: 174 LRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDV 233
Query: 478 HFN-RDGSLIVSSSYDGLCRIWDTASGQCLKTL--IDDDNPXVSFVKFSPNGKYILA-AT 645
++ R L S D IWD S K + + + V+ + F+P ++++A +
Sbjct: 234 AWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGS 293
Query: 646 LDNTLKLWD 672
D T+KL+D
Sbjct: 294 TDKTVKLFD 302
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSA-DKLIKIW 162
L F GHT +S ++P +W+ SS A D +++IW
Sbjct: 366 LLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 57.6 bits (133), Expect = 8e-09
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 22/220 (10%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
H AVS + + L S S DK +K+W D K ++I H I+ VA D L+
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLF 306
Query: 256 SASDDKTLKVWELS-SGKCLK-----TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
+ S D TLKVW+ GK K L N V N + ++ GS D +V W+
Sbjct: 307 TGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFWE 366
Query: 418 VRTGKCLK---PLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW---DTASGQCLKTLID 579
+ K L L H ++ + GSL++S D +W S CL L+D
Sbjct: 367 GQ--KYLSHGGTLRGHR--LAVLCLAAAGSLVLSGGADKNICVWRRNGDGSHSCLSVLMD 422
Query: 580 DDNPXVSFVKFSPNG---------KYIL-AATLDNTLKLW 669
P +G K+I+ + +LD ++K+W
Sbjct: 423 HVGPVKCLTAVEDDGEGHREKGDQKWIVYSGSLDKSVKVW 462
Score = 36.7 bits (81), Expect = 0.015
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 261
AV+++ + + S+D + W G T+ GH++ + +A + L++S
Sbjct: 340 AVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHGGTLRGHRLAVLCLAAAGS--LVLSG 397
Query: 262 SDDKTLKVWELS---SGKCLKTLKGHSNYVFCCNF-----------NPQSNLIVSGSFDE 399
DK + VW + S CL L H V C Q ++ SGS D+
Sbjct: 398 GADKNICVWRRNGDGSHSCLSVLMDHVGPVKCLTAVEDDGEGHREKGDQKWIVYSGSLDK 457
Query: 400 SVRIWDV 420
SV++W V
Sbjct: 458 SVKVWRV 464
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 57.2 bits (132), Expect = 1e-08
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-------------------K 324
H+ + VA S D SAS D T+ W++SSGK K + K
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNK 219
Query: 325 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLI 504
HS + + +G D V IWDVRT + ++ P H + VS + F S +
Sbjct: 220 NHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSEL 279
Query: 505 VSSSYDGLCRIWD 543
S S+D ++W+
Sbjct: 280 YSGSFDRTVKVWN 292
Score = 56.4 bits (130), Expect = 2e-08
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Frame = +1
Query: 28 SSVAKPNYTLKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--- 195
S V +P T F+ + H ++V SV S + S+S D I W GK +K I
Sbjct: 143 SRVQEPLSTDGFSVIVKHRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPS 202
Query: 196 ----SGHKMGISD------------VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 327
H M + + +A SSD R + + D+ + +W++ + + ++ G
Sbjct: 203 DEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPG 262
Query: 328 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 477
H N V C F ++ + SGSFD +V++W+V + H + A+
Sbjct: 263 HRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAI 312
Score = 35.5 bits (78), Expect = 0.035
Identities = 28/114 (24%), Positives = 47/114 (41%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GH VS + F L S S D+ +K+W D F GH+ I + R +
Sbjct: 262 GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRKERAL 321
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
+ D+T+ ++ + S+ CC + N +SGS + +V +W
Sbjct: 322 -TVGRDRTMLYHKVPESTRMIYRAPASSLESCCFIS--DNEYLSGSDNGTVALW 372
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
H +S ++ + D L+ SAS D+T+KVW + KC++++K H + V + +L+
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAV--NSVTTAESLVF 191
Query: 382 SGSFDESVRIW-----DVRTGKCL-KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
+GS D +V++W RT L + L V+A+ + + S S DG W+
Sbjct: 192 TGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSH--MAVYSGSSDGAVNFWE 249
Query: 544 TASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ LK ++ + + GK + + D + +W
Sbjct: 250 MGDKKLLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKICVW 291
Score = 50.8 bits (116), Expect = 9e-07
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 19/221 (8%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
H+ AVS + + + L S+S D+ +K+W +D K ++I H ++ V ++ L+
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV--TTAESLVF 191
Query: 256 SASDDKTLKVWELS-SGK-----CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
+ S D T+KVW+ GK +TL + V + + + SGS D +V W+
Sbjct: 192 TGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMA--VYSGSSDGAVNFWE 249
Query: 418 VRTGKCLKPLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLKTLIDDDN 588
+ K LK ++ + G L+ S + D +W + C+ L
Sbjct: 250 MGDKKLLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKICVWRREGKVHTCVSVLTGHTG 309
Query: 589 PXVSFVKFSP---------NGKYIL-AATLDNTLKLWDYSR 681
P P +G+ +L + +LD ++K+W R
Sbjct: 310 PVKCLAVVEPSGGEEEDGGDGRLVLYSGSLDKSVKVWRVPR 350
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 56.8 bits (131), Expect = 1e-08
Identities = 56/184 (30%), Positives = 76/184 (41%), Gaps = 12/184 (6%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 255
H AVSS+ L SSS D IK+W D K ++I H I+ V D L+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVF 292
Query: 256 SASDDKTLKVWELS-SGKCLK-----TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
+ S D T+KVW+ GK K L N V QS+++ GS D V W+
Sbjct: 293 TGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWE 352
Query: 418 VRTGKCLKP--LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW----DTASGQCLKTLID 579
R+ + L H V + G+L++S S D +W S QCL L
Sbjct: 353 -RSKRSFTGGILKGHKSAVLCLGI--AGNLLLSGSADKNICVWRRDPSDKSHQCLSVLTG 409
Query: 580 DDNP 591
P
Sbjct: 410 HMGP 413
Score = 55.6 bits (128), Expect = 3e-08
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
H +S ++ + L+ S+S D T+KVW ++ KCL+++ H + + + +L+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDLVF 292
Query: 382 SGSFDESVRIWDVR-TGKCLK-----PLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
+GS D +V++W GK K L + V+A+ S++ S DGL W+
Sbjct: 293 TGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWE 352
Query: 544 TASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ ++ V + + G +L+ + D + +W
Sbjct: 353 RSKRSFTGGILKGHKSAVLCLGIA--GNLLLSGSADKNICVW 392
Score = 41.9 bits (94), Expect = 4e-04
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 21/145 (14%)
Frame = +1
Query: 49 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDV 225
+TL L AV+++ + S+D L+ W F I GHK + +
Sbjct: 314 HTLAQVLLKQENAVTALAVKSQSSIVYCGSSDGLVNYWERSKRSFTGGILKGHKSAVLCL 373
Query: 226 AWSSDSRLIVSASDDKTLKVWELS----SGKCLKTLKGHSNYVFC--------CNFNPQS 369
+ + L++S S DK + VW S +CL L GH V C C+ ++
Sbjct: 374 GIAGN--LLLSGSADKNICVWRRDPSDKSHQCLSVLTGHMGPVKCLAVEEERACHQGAKA 431
Query: 370 N--------LIVSGSFDESVRIWDV 420
+ +I SGS D+SV++W V
Sbjct: 432 SVAEGDRKWIIYSGSLDKSVKVWRV 456
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 56.8 bits (131), Expect = 1e-08
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 6/209 (2%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLI--KIWGAYDGKFEKTISGHKMGISDVAWSS 237
T+ GH V ++ + + L+S S DK I + + K ++GHK + + WS
Sbjct: 289 TMEGHRLRVGALAWGSSV--LSSGSRDKSILQRDIRCQEDHVSK-LAGHKSEVCGLKWSY 345
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSG--SFDESVR 408
D+R + S +D L VW S + + H+ V ++P + L+ SG + D +R
Sbjct: 346 DNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIR 405
Query: 409 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYD-GLCRIWDTASGQCLKTLIDDD 585
W+ T L + S + L+ + Y +W + + TL
Sbjct: 406 FWNTTTNTHLSSIDTCSQVCNLAWSKNVNELVSTHGYSQNQIIVWKYPTMSKIATLTGHT 465
Query: 586 NPXVSFVKFSPNGKYILAATLDNTLKLWD 672
V ++ SP+G+ I+ D TL+ W+
Sbjct: 466 Y-RVLYLAVSPDGQTIVTGAGDETLRFWN 493
Score = 55.6 bits (128), Expect = 3e-08
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASS---SADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
HT AV ++ +SP+ L +S +AD+ I+ W +I + ++AWS +
Sbjct: 376 HTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQ-VCNLAWSKNVN 434
Query: 247 LIVSAS--DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
+VS + VW+ + + TL GH+ V +P IV+G+ DE++R W+V
Sbjct: 435 ELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
Score = 52.8 bits (121), Expect = 2e-07
Identities = 45/207 (21%), Positives = 96/207 (46%), Gaps = 6/207 (2%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
G +V SV ++ G LA ++ ++IW A K +T+ GH++ + +AW S ++
Sbjct: 250 GAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWGSS--VL 307
Query: 253 VSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
S S DK++ ++ + + L GH + V ++ + + SG D + +W+ +
Sbjct: 308 SSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHST 367
Query: 430 KCLKPLPAHSDPVSAVHFNRDGSLIVSS---SYDGLCRIWDTASGQCLKTLIDDDNPXVS 600
+ + H+ V A+ ++ +++S + D R W+T + L ++ D V
Sbjct: 368 QPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSI--DTCSQVC 425
Query: 601 FVKFSPNGKYILA--ATLDNTLKLWDY 675
+ +S N +++ N + +W Y
Sbjct: 426 NLAWSKNVNELVSTHGYSQNQIIVWKY 452
Score = 32.3 bits (70), Expect = 0.32
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 171
TL GHT V + SP+G+ + + + D+ ++ W +
Sbjct: 460 TLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVF 495
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 56.8 bits (131), Expect = 1e-08
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTIS--GHKMGISDVAWSSDSR 246
H+ V+ +++SP+G + S+DK I+ G K + S GHK I V+WS DS+
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 247 LIVSASDDKTLKVWELSS----GKCLKTLK-----GHSNYVFCCNFNPQSNLIVSGSFDE 399
+++ S DK+ KVWE++ G +KTL G + + C + Q++ +++ S
Sbjct: 110 RVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCLW--QNDHLITVSLGG 167
Query: 400 SVRIWDV-RTGKCLKPLPAHSDPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
++ ++ K L H V+++ + I+S SYDGL W G K
Sbjct: 168 TMSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYDGLIVKWLKGVGYSCKLQ 227
Query: 574 IDD 582
+ D
Sbjct: 228 MKD 230
Score = 48.8 bits (111), Expect = 3e-06
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Frame = +1
Query: 325 GHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSL 501
GHS V C F P I + D V +D K HS+ V+ + ++ DG+
Sbjct: 6 GHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTK 65
Query: 502 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSF--VKFSPNGKYILAATLDNTLKLWD 672
++ S D I+D +G + L +D S V +SP+ K +L + D + K+W+
Sbjct: 66 FITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWE 124
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Frame = +1
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
I + +D + ++ K + + HSN+V C ++P ++ S D+ I+D +TG
Sbjct: 24 IATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTG 83
Query: 430 KCLKPLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS----GQCLKTL 573
+ L + H + AV ++ D +++ S D ++W+ A G +KTL
Sbjct: 84 DKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTL 138
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAWSSDS 243
L H A++ +++SP+ AS A++ +W + + + H I+ +AWS ++
Sbjct: 352 LEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNN 411
Query: 244 RLIVSASDDKTLKVWELS--SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
+++ + S D + V+E+ + + H V F + SG D SVR+W
Sbjct: 412 KMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDCTVASSGE-DASVRLWH 470
Query: 418 V 420
+
Sbjct: 471 I 471
Score = 32.3 bits (70), Expect = 0.32
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTISGHKMG-----ISDV 225
GH ++ +V +SP+ + + + SADK K+W + G KT+S + G +
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGC 153
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSGSFDES 402
W +D + VS +L + K L GH N I+S S+D
Sbjct: 154 LWQNDHLITVSLGGTMSLFSAD-DMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYDGL 212
Query: 403 VRIW 414
+ W
Sbjct: 213 IVKW 216
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
Frame = +1
Query: 76 HTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
H+ VSS+ F N + SSS D LI++ F+ S + S +D + +
Sbjct: 262 HSAPVSSIVFQQNSLSRVISSSYDGLIRLMDVEKSVFDLVYSTDEAIFSLSQRPNDEQSL 321
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTG 429
D VW+L +GK + + H + +FNPQ+ +++ + S D + +WD+R+
Sbjct: 322 YFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSM 381
Query: 430 KCLKPLPA----HSDPVSAVHFNRDGSLIVSSSYD 522
KP HS V + +F+ G + ++S D
Sbjct: 382 GAKKPKTLSTVNHSRAVHSAYFSPSGLSLATTSLD 416
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 9/125 (7%)
Frame = +1
Query: 340 VFCCNFNPQSN--LIVSGSFDESVRIWDVRTGK-----CLKPLPAHSDPVSAVHFNRDG- 495
+F F P N ++ +G +V W++ G + HS PVS++ F ++
Sbjct: 217 IFVVQFLPCENVKMVAAGDKLGNVGFWNLDCGNEEDNDGIYLFTPHSAPVSSIVFQQNSL 276
Query: 496 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLD-NTLKLWD 672
S ++SSSYDGL R+ D + + L+ + + + PN + L D +WD
Sbjct: 277 SRVISSSYDGLIRLMDVE--KSVFDLVYSTDEAIFSLSQRPNDEQSLYFGQDYGVFNVWD 334
Query: 673 YSRGK 687
GK
Sbjct: 335 LRAGK 339
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 56.4 bits (130), Expect = 2e-08
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 15/214 (7%)
Frame = +1
Query: 76 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS-RL 249
HT++V + ++ LAS+SADK +K+W G + T+ H + VAW+ + +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 250 IVSASDDKT--LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
++S S D+T LK S K + + + + +VS D +V+ +DVR
Sbjct: 292 LLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLE-DGTVKGFDVR 350
Query: 424 TGKCLK-------PLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQ--CLKTL 573
+ H + ++V +N +L+ + S D ++WD ++ + C+ T
Sbjct: 351 QASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIAT- 409
Query: 574 IDDDNPXVSFVKFSPNGKYILA-ATLDNTLKLWD 672
+ + + F+ FSP+ ++LA + LKLWD
Sbjct: 410 HNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWD 443
Score = 56.4 bits (130), Expect = 2e-08
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 10/172 (5%)
Frame = +1
Query: 202 HKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 375
H + +AW+ + R ++ SAS DK +KVW++++G C T++ H+ V +N + +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 376 IVSGSFDESVRIWDVR-TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD--- 543
++SGSFD++V + D R SD S V S DG + +D
Sbjct: 292 LLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQ 351
Query: 544 ---TASGQCLKTLIDDDNPXVSFVKFSPNGKYILA-ATLDNTLKLWDYSRGK 687
+AS I+ + + V ++ + +LA + D T+KLWD S +
Sbjct: 352 ASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE 403
Score = 35.5 bits (78), Expect = 0.035
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Frame = +1
Query: 25 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISG 201
++S++ FT+ GH +A +SV ++ + LA+ S D+ +K+W + + I+
Sbjct: 351 QASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE-PSCIAT 409
Query: 202 HKM---GISDVAWSSDSRLIVSASDDK-TLKVWELSS 300
H G+ +A+S D+ +++ LK+W+ S
Sbjct: 410 HNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWDTLS 446
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 56.4 bits (130), Expect = 2e-08
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Frame = +1
Query: 28 SSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKF---EKT 192
SS PN + + T T ++SS+ FSP + L ++S D ++ W DG K
Sbjct: 10 SSTNNPNNSYEITPPA-TDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKV 68
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 372
H + AW D + + DK K+W L SG T+ H + P N
Sbjct: 69 SMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMN 128
Query: 373 LIVSGSFDESVR 408
L+V+GS+D++++
Sbjct: 129 LLVTGSWDKTLK 140
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Frame = +1
Query: 352 NFNPQSNLIVSGSFDESVRIWDV-RTGKCLKPLP----AHSDPVSAVHFNRDGSLIVSSS 516
+F+P+++++V+ S+D VR W++ R+ + P +H PV + DG+ + +
Sbjct: 33 SFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTTVFTGG 92
Query: 517 YDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLK 663
D ++W SG T+ D P + + + P ++ + D TLK
Sbjct: 93 CDKQAKMWPLLSGAQPSTVAMHDAP-FNQIAWIPGMNLLVTGSWDKTLK 140
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Frame = +1
Query: 130 SSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL--SSG 303
S+S DK + +E T IS +++S + ++V+ S D ++ WE+ S G
Sbjct: 2 STSGDKATSSTNNPNNSYEITPPATD-SISSLSFSPKADILVATSWDCQVRCWEITRSDG 60
Query: 304 KCL---KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSA 474
K H V C + + +G D+ ++W + +G + H P +
Sbjct: 61 SIASEPKVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQ 120
Query: 475 VHFNRDGSLIVSSSYD 522
+ + +L+V+ S+D
Sbjct: 121 IAWIPGMNLLVTGSWD 136
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +1
Query: 448 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD-TASGQCL----KTLIDDDNPXVSFVKF 612
P +D +S++ F+ ++V++S+D R W+ T S + K + D P V +
Sbjct: 23 PPATDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQP-VLCSAW 81
Query: 613 SPNGKYILAATLDNTLKLWDYSRG 684
+G + D K+W G
Sbjct: 82 KDDGTTVFTGGCDKQAKMWPLLSG 105
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 56.0 bits (129), Expect = 2e-08
Identities = 44/215 (20%), Positives = 91/215 (42%), Gaps = 11/215 (5%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVA-------- 228
GH AV + S +G L S D +++W E + + I A
Sbjct: 97 GHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAF 156
Query: 229 WSSDSRLI--VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDE 399
W+ D + + A+ L +W + + +++ + ++ V FNP + NL+ + + D
Sbjct: 157 WAVDHQFEGDLFATAGAQLDIWNHNRSQPVQSFQWGTDSVISVRFNPGEPNLLATSASDR 216
Query: 400 SVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
S+ I+D+R + + + S + + +++ DG C +D K +
Sbjct: 217 SITIYDLRLSSAARKIIMMTKTNSIAWNPMEPMNLTAANEDGSCYSFDGRKLDEAKCVHK 276
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
D V + FSP G+ + + D +++++ Y+ G
Sbjct: 277 DHVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGG 311
Score = 50.8 bits (116), Expect = 9e-07
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Frame = +1
Query: 319 LKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDG 495
+ GH + V C NP I S S D +R+WD+ + + + P H V + + DG
Sbjct: 52 MDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDG 111
Query: 496 SLIVSSSYDGLCRIWDTASGQCLKTLIDDDN---PXVSFV------KFSPNGKYILAATL 648
+++VS D R+W+ + I +N P ++V + L AT
Sbjct: 112 NVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFATA 171
Query: 649 DNTLKLWDYSRGKCFEDIYW 708
L +W+++R + + W
Sbjct: 172 GAQLDIWNHNRSQPVQSFQW 191
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Frame = +1
Query: 118 EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS-RLIVSASDDKTLKVWEL 294
E+ + +A KL KI+ F + GH+ G+S +A + + + I SAS D +++W++
Sbjct: 30 EYQRALTAAKLEKIFAR---PFVGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDI 86
Query: 295 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
SS + + GH V + N++VS D +VR+W+V
Sbjct: 87 SSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNV 128
Score = 39.9 bits (89), Expect = 0.002
Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 5/224 (2%)
Frame = +1
Query: 13 PQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 192
P SS++ N+ A +V G+ A++ A + IW + ++
Sbjct: 131 PSLEDSSISSENFIEPSATYVWKNAFWAVDHQFEGDLFATAGAQ--LDIWNHNRSQPVQS 188
Query: 193 ISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQ 366
+ V ++ + L+ +++ D+++ +++L S K + N
Sbjct: 189 FQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAARKIIMMTKTNSIAWNPMEP 248
Query: 367 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV---HFNRDGSLIVSSSYDGLCRI 537
NL + D S +D R K + H D VSAV F+ G V+ SYD RI
Sbjct: 249 MNLTAANE-DGSCYSFDGR--KLDEAKCVHKDHVSAVMDIDFSPTGREFVTGSYDRSVRI 305
Query: 538 WDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ G + V VK+S + Y+++ + D L+LW
Sbjct: 306 FPYNGGHSREIYHTKRMQRVFCVKYSCDATYVISGSDDTNLRLW 349
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/80 (22%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSNLI 378
H + D+ +S R V+ S D++++++ + G + VFC ++ + +
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIYHTKRMQRVFCVKYSCDATYV 337
Query: 379 VSGSFDESVRIWDVRTGKCL 438
+SGS D ++R+W + + L
Sbjct: 338 ISGSDDTNLRLWKAKASEQL 357
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
H IS +A S D RL+ S S DKT KVW +S +C++++ H + V + L+
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAV-VSGFDGLVF 268
Query: 382 SGSFDESVRIW----DVRTGKCL--KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
+GS D +V++W + K + L V+A+ ++ +L+ S DG W+
Sbjct: 269 TGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFWE 328
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Frame = +1
Query: 328 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV 507
H + + C + L+ SGS+D++ ++W V +C++ + AH D V+AV DG L+
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDG-LVF 268
Query: 508 SSSYDGLCRIW---DTASGQ---CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
+ S DG ++W D A +TL+ D V+ + + + + D T+ W
Sbjct: 269 TGSADGTVKVWRREDQAKDTKHFFSETLLKQD-CAVTAIAVDQSATLVYCGSSDGTVNFW 327
Query: 670 D 672
+
Sbjct: 328 E 328
Score = 41.1 bits (92), Expect = 7e-04
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWSSD 240
TL AV+++ + + S+D + W + K + GHK+ + + +
Sbjct: 295 TLLKQDCAVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAV--LCLVAA 352
Query: 241 SRLIVSASDDKTLKVWELSSGK----CLKTLKGHSNYVFCCNFNPQSN--------LIVS 384
L+ S S D ++VW G CL L GH+ V C ++ S
Sbjct: 353 GNLMFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERRWIVYS 412
Query: 385 GSFDESVRIWDV 420
GS D SV++W V
Sbjct: 413 GSLDRSVKMWRV 424
Score = 29.5 bits (63), Expect = 2.3
Identities = 36/163 (22%), Positives = 70/163 (42%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
I +A S D L+ + SD K ++VW+ + + K +S V + I +G
Sbjct: 101 IYSLATSGD--LLYTGSDSKNIRVWK--NHVEFSSFKSNSGLVKAIVL--AGDKIFTGHQ 154
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
D +R+W + + + P + + + R+ IV SSY R +++ + L
Sbjct: 155 DGKIRVWKAASKESNVHRRVGTMP-NLLDYIRNS--IVPSSYFNFTRRNRSSAALGFRHL 211
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
+S + S + + + + + D T K+W S +C E +
Sbjct: 212 -----DAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESV 249
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 55.2 bits (127), Expect = 4e-08
Identities = 47/205 (22%), Positives = 96/205 (46%), Gaps = 10/205 (4%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWG-------AYDGKFEKTISGHKMGISDVAWSSDSR 246
VSS++F + E A++ + IK++ D + + +S ++W+ +
Sbjct: 374 VSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEK 433
Query: 247 LIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDV 420
+++SD + + VW++++ + L + H + +F+ + +++VSGS D V++W
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT 493
Query: 421 RTGKCLKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXV 597
R + + ++ + V +N S I S D +D + + V
Sbjct: 494 RQEASVINIDMKAN-ICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAV 552
Query: 598 SFVKFSPNGKYILAATLDNTLKLWD 672
S+VKF N + A+T D+TL+LWD
Sbjct: 553 SYVKFLSNNELASAST-DSTLRLWD 576
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +1
Query: 88 VSSVKFSP-NGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSDSRLIVSA 261
+ VK++P + ++A SAD I + + + SGHK +S V + S++ L SA
Sbjct: 508 ICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNEL-ASA 566
Query: 262 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
S D TL++W++ ++T +GH+N S + GS V ++
Sbjct: 567 STDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVY 617
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +1
Query: 70 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 249
+GH KAVS VKF N E LAS+S D +++W D +T GH + V + +S
Sbjct: 546 SGHKKAVSYVKFLSNNE-LASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEY 604
Query: 250 IVSASDDKTLKVW 288
+ S+ + V+
Sbjct: 605 LACGSETNEVYVY 617
Score = 37.5 bits (83), Expect = 0.009
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 3/132 (2%)
Frame = +1
Query: 76 HTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRL 249
H K SV FS L S S D +K+W I K I V ++ S
Sbjct: 462 HEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINID-MKANICCVKYNPGSSNY 520
Query: 250 IVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
I S D + ++L + + L GH V F +N + S S D ++R+WDV+
Sbjct: 521 IAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFL-SNNELASASTDSTLRLWDVKD 579
Query: 427 GKCLKPLPAHSD 462
++ H++
Sbjct: 580 NLPVRTFRGHTN 591
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 54.4 bits (125), Expect = 7e-08
Identities = 51/236 (21%), Positives = 105/236 (44%), Gaps = 12/236 (5%)
Frame = +1
Query: 13 PQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG----- 177
P + K+ + + L AG V+++ + NG A +S+ ++ +W A
Sbjct: 190 PNAIKAFNVQTSQDLHLQAAGVVGQVNAMTIA-NGMLFAGTSSGSIL-VWKATTDSESDP 247
Query: 178 -KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN 354
K+ ++ GH ++ ++ +++ S S DKT+K+W+L++ +C+ TLK H+ V +
Sbjct: 248 FKYLTSLEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTV--TS 303
Query: 355 FNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVH-----FNRDGSLIVSSSY 519
++S S D ++++W LK + S+VH + + I+ SY
Sbjct: 304 LLCWDKCLISSSLDGTIKVWAYSENGILKVVQTRRQEQSSVHALSGMHDAEAKPIIFCSY 363
Query: 520 -DGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
+G I+D S Q + ++ + P G + + L++W + G
Sbjct: 364 QNGTVGIFDLPSFQERGRMFSTHT--IATLTIGPQG-LLFSGDESGNLRVWTLAAG 416
Score = 52.4 bits (120), Expect = 3e-07
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 13/225 (5%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKMG-- 213
P + +L GH K + + + L S S D +++W G+ +I+ + G
Sbjct: 119 PGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAGSL 178
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKT----LKGHSNYVFCCNFNPQSNLIV 381
IS+ W V +K + + + + L + G N + N ++
Sbjct: 179 ISEGPW-------VFLGLPNAIKAFNVQTSQDLHLQAAGVVGQVNAMTIAN-----GMLF 226
Query: 382 SGSFDESVRIWDVRTG------KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
+G+ S+ +W T K L L HS V+ F G ++ S S D ++WD
Sbjct: 227 AGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTC--FAVGGQMLYSGSVDKTIKMWD 284
Query: 544 TASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYS 678
+ QC+ TL S + + K +++++LD T+K+W YS
Sbjct: 285 LNTLQCIMTLKQHTGTVTSLLCWD---KCLISSSLDGTIKVWAYS 326
Score = 44.8 bits (101), Expect = 6e-05
Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 5/182 (2%)
Frame = +1
Query: 160 WGAYDG-KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 336
W + G ++ GH + +A S + S S D TL+VW+ +SG+C+ ++ +
Sbjct: 115 WSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAE 174
Query: 337 YVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAH-SDPVSAVHFNRDGSLIVSS 513
+ P L +++ ++V+T + L A V+A+ +G L +
Sbjct: 175 AGSLISEGPWVFL----GLPNAIKAFNVQTSQDLHLQAAGVVGQVNAMTI-ANGMLFAGT 229
Query: 514 SYDGLCRIWDT---ASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRG 684
S G +W + K L + F+ G+ + + ++D T+K+WD +
Sbjct: 230 S-SGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVGGQMLYSGSVDKTIKMWDLNTL 288
Query: 685 KC 690
+C
Sbjct: 289 QC 290
Score = 31.5 bits (68), Expect = 0.57
Identities = 11/55 (20%), Positives = 24/55 (43%)
Frame = +1
Query: 538 WDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
W G + ++ N + + + + ++D TL++WD + G+C I
Sbjct: 115 WSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSI 169
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 277 LKVWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPA 453
L W G + +L+GH+ + S+ + S S D ++R+WD +G+C+ +
Sbjct: 112 LHSWSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINL 171
Query: 454 HSDPVSAV 477
++ S +
Sbjct: 172 DAEAGSLI 179
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 54.4 bits (125), Expect = 7e-08
Identities = 50/221 (22%), Positives = 90/221 (40%), Gaps = 12/221 (5%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKMGISD 222
N ++ + GH V S+ + N L + D K++ T GH +
Sbjct: 197 NRQVRTLIGGHESRVGSLAW--NNHILTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEVCG 254
Query: 223 VAWSSDSRLIVSASDDKTLKVWE---LSSGK----CLKTLKGHSNYVFCCNFNP-QSNLI 378
+ WS + + S + + +W+ ++S K L + H+ V + P Q+ L+
Sbjct: 255 LKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWCPFQATLL 314
Query: 379 VSGSF--DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTA 549
+G D ++ W+ TG CL + S S + R+ L+ S + +W
Sbjct: 315 ATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGFTQNQLTLWKYP 374
Query: 550 SGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
S + L + V F+ SPNG + +A D L+LW+
Sbjct: 375 SMSKMAEL-NGHTSRVLFMAQSPNGCTVASAAGDENLRLWN 414
Score = 46.8 bits (106), Expect = 1e-05
Identities = 40/197 (20%), Positives = 80/197 (40%), Gaps = 13/197 (6%)
Frame = +1
Query: 151 IKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL- 321
+ +W A G + TI K ++ + W+ D + D+ +++W+ S + ++TL
Sbjct: 145 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLI 204
Query: 322 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-TGKCLKPLPAHSDPVSAVHFNRDGS 498
GH + V +N ++++ +G D + DVR + H++ V + ++ G
Sbjct: 205 GGHESRVGSLAWN--NHILTTGGMDGKIVNNDVRIRSSIVGTYLGHTEEVCGLKWSESGK 262
Query: 499 LIVSSSYDGLCRIWDTASGQCLKTL------IDDDNPXVSFVKFSPNGKYILA---ATLD 651
+ S + IWD S K ++ V + + P +LA D
Sbjct: 263 KLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWCPFQATLLATGGGVGD 322
Query: 652 NTLKLWDYSRGKCFEDI 702
+K W+ G C +
Sbjct: 323 GKIKFWNTHTGACLNSV 339
Score = 45.2 bits (102), Expect = 4e-05
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Frame = +1
Query: 37 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSA---DKLIKIWGAYDGKFEKTISGHK 207
+KP HT AV ++ + P L ++ D IK W + G ++
Sbjct: 284 SKPTRQWLHRFEEHTAAVRALAWCPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGS 343
Query: 208 MGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 381
+ + WS R ++S+ L +W+ S + L GH++ V +P +
Sbjct: 344 Q-VCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVA 402
Query: 382 SGSFDESVRIWDV 420
S + DE++R+W+V
Sbjct: 403 SAAGDENLRLWNV 415
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 192
P+ + L GHT V + SPNG +AS++ D+ +++W + G+ KT
Sbjct: 374 PSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVF-GEPPKT 422
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 53.6 bits (123), Expect = 1e-07
Identities = 49/221 (22%), Positives = 90/221 (40%), Gaps = 12/221 (5%)
Frame = +1
Query: 46 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKMGISD 222
N ++ GH V S+ + N L + D K++ +T GH +
Sbjct: 166 NRQVRTLRGGHESRVGSLAW--NNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCG 223
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSS-------GKCLKTLKGHSNYVFCCNFNP-QSNLI 378
+ WS + + S +D + +W+ S + L + H+ V + P Q++L+
Sbjct: 224 LKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLL 283
Query: 379 VSGSF--DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTA 549
+G D ++ W+ TG CL + S S + + L+ S + +W
Sbjct: 284 ATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSSHGFTQNQLTLWKYP 343
Query: 550 SGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
S + L + V F+ SP+G + +A D TL+LW+
Sbjct: 344 SMVKMAEL-NGHTSRVLFMAQSPDGCTVASAAGDETLRLWN 383
Score = 52.0 bits (119), Expect = 4e-07
Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 13/197 (6%)
Frame = +1
Query: 151 IKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 324
+ +W A G K TI + ++ + W+ D + D+ +++W+ S + ++TL+
Sbjct: 114 VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLR 173
Query: 325 -GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-TGKCLKPLPAHSDPVSAVHFNRDGS 498
GH + V +N ++++ +G D + DVR ++ H++ V + ++ G
Sbjct: 174 GGHESRVGSLAWN--NHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGK 231
Query: 499 LIVSSSYDGLCRIWD---TASGQCLKTLI---DDDNPXVSFVKFSPNGKYILA---ATLD 651
+ S D + IWD AS + + ++ V + + P +LA D
Sbjct: 232 KLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGD 291
Query: 652 NTLKLWDYSRGKCFEDI 702
+K W+ G C +
Sbjct: 292 GKIKFWNTHTGACLNSV 308
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Frame = +1
Query: 31 SVAKPNYTLKFT--LAGHTKAVSSVKFSP-NGEWLASSSA--DKLIKIWGAYDGKFEKTI 195
SVA N T ++ HT AV ++ + P LA+ D IK W + G ++
Sbjct: 249 SVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSV 308
Query: 196 SGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 369
+ + WS R ++S+ L +W+ S + L GH++ V +P
Sbjct: 309 ETGSQ-VCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDG 367
Query: 370 NLIVSGSFDESVRIWDV 420
+ S + DE++R+W+V
Sbjct: 368 CTVASAAGDETLRLWNV 384
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 192
P+ L GHT V + SP+G +AS++ D+ +++W + G+ KT
Sbjct: 343 PSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVF-GEPPKT 391
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Frame = +1
Query: 73 GHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGK----FEKTISGHKMGISDVAWSS 237
GH A+SS + P + + S D +K+W + F+ ++ +S +A S
Sbjct: 101 GHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSH 160
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIW 414
LI + +DD +++ +++SG TL GH + V ++ S ++ +G D ++R W
Sbjct: 161 T--LIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Query: 415 DVRTGKCLKPL 447
D+R C + L
Sbjct: 219 DIRRAGCFRVL 229
Score = 48.8 bits (111), Expect = 3e-06
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 9/143 (6%)
Frame = +1
Query: 292 LSSGKCLKTLK-----GHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLK--PL 447
++ KC+ T++ GH + + P + + ++GSFD V++WD T + + +
Sbjct: 85 IAKHKCIFTVRKQHENGHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKM 144
Query: 448 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGK 627
P + +LI + + D R+ D ASG TL V V++S + +
Sbjct: 145 PGKVYRTAMSSMAMSHTLIAAGTDDVQVRLCDIASGAFSHTL-SGHRDGVMSVEWSTSSE 203
Query: 628 YIL-AATLDNTLKLWDYSRGKCF 693
++L D ++ WD R CF
Sbjct: 204 WVLYTGGCDGAIRFWDIRRAGCF 226
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 240
F + G + + + +A+ + D +++ G F T+SGH+ G+ V WS+
Sbjct: 142 FKMPGKVYRTAMSSMAMSHTLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTS 201
Query: 241 SR-LIVSASDDKTLKVWELSSGKCLKTL 321
S ++ + D ++ W++ C + L
Sbjct: 202 SEWVLYTGGCDGAIRFWDIRRAGCFRVL 229
Score = 40.3 bits (90), Expect = 0.001
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 5/118 (4%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI--SDVAW---SSD 240
H V+ +K + +G +L S+ + I++W G+ T+ + G +D A +SD
Sbjct: 311 HYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGR--NTLVNFETGRIQTDRAIQLDTSD 368
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
+V KT+K + + SG+ L+GH V C FN + + D + +W
Sbjct: 369 DPALVFVPCMKTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVW 426
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
L GH ++V++ F+ N + L +S AD+ I +W G E ++ ++ WS
Sbjct: 395 LRGHYESVNTCCFNSNDQELYTSGADRQIIVWSP-GGSVEDEMAQGEVAEDKDNWS 449
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +1
Query: 247 LIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 408
L+ S +D L +W+L S K K+L H V ++P ++SGS D S
Sbjct: 19 LLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCI 78
Query: 409 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
IWDV G + L AH V V ++ + S S D CRI+
Sbjct: 79 IWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 122
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +1
Query: 178 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 357
K K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV +
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 103
Query: 358 NPQSNLIVSGSFDESVRIW 414
+P + + S S D + RI+
Sbjct: 104 DPLAKYVASLSSDRTCRIY 122
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
+L+ H K V +++SP+ +L S S D IW G + + H + VAW +
Sbjct: 48 SLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA 107
Query: 244 RLIVSASDDKTLKVW 288
+ + S S D+T +++
Sbjct: 108 KYVASLSSDRTCRIY 122
Score = 29.5 bits (63), Expect = 2.3
Identities = 8/27 (29%), Positives = 21/27 (77%)
Frame = +1
Query: 604 VKFSPNGKYILAATLDNTLKLWDYSRG 684
+++SP+ Y+++ ++DN+ +WD ++G
Sbjct: 59 LQWSPDDAYLISGSVDNSCIIWDVNKG 85
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 12/171 (7%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 378
H +S +A S D L+ S S D+TLK+W + KCL++ H + + + + I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-I 222
Query: 379 VSGSFDESVRIW----------DVRTGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDG 525
+GS D+ +++W R + L H+ ++A+ + +GSL+ S DG
Sbjct: 223 YTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDG 282
Query: 526 LCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYS 678
+W+ G + + S + + + + + D T++LW S
Sbjct: 283 SILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDILCSGSADKTVRLWKCS 333
Score = 49.6 bits (113), Expect = 2e-06
Identities = 58/222 (26%), Positives = 91/222 (40%), Gaps = 24/222 (10%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSDSRLI 252
H AVS + S +G L S S D+ +KIW D K E + H I+ VA S + I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-I 222
Query: 253 VSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSN----------LIVSGSFDE 399
+ S D+ +KVW + + + +K + HS N N L+ SG D
Sbjct: 223 YTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDG 282
Query: 400 SVRIWDVRTG---KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG--QCL 564
S+ +W+ G + L H++ V + D ++ S S D R+W ++ CL
Sbjct: 283 SILVWERDDGGDIVVVGMLRGHTESVLCLAVVSD--ILCSGSADKTVRLWKCSAKDYSCL 340
Query: 565 KTLIDDDNPXVSFV-------KFSPNGKYILAATLDNTLKLW 669
L P K +I + LD+ +K+W
Sbjct: 341 AMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDSQVKVW 382
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 52.8 bits (121), Expect = 2e-07
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Frame = +1
Query: 187 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE--LSSGK----CLKTLKGHSNYVFC 348
+T GH + + WS S +D + +W+ L+S K L + H+ V
Sbjct: 246 ETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRA 305
Query: 349 CNFNP-QSNLIVSGSF--DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY 519
+ P Q++L+ +G D ++ W+ TG CL + S S + + L+ S +
Sbjct: 306 LAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGF 365
Query: 520 -DGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
+W S + L + V F+ SPNG + +A D L+LW+
Sbjct: 366 TQNQLTLWKYPSMSKMAEL-NGHTSRVLFMAQSPNGCTVASAAGDENLRLWN 416
Score = 50.8 bits (116), Expect = 9e-07
Identities = 39/196 (19%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Frame = +1
Query: 151 IKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 324
+ +W A G + TI K ++ + W+ D + D+ +++W+ S + ++TL+
Sbjct: 148 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLR 207
Query: 325 -GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-TGKCLKPLPAHSDPVSAVHFNRDGS 498
GH + V ++ ++++ +G D + DVR ++ H++ V + ++ G+
Sbjct: 208 GGHESRVGSLAWD--NHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSESGN 265
Query: 499 LIVSSSYDGLCRIWDTASGQCLKT-----LIDDDNPXVSFVKFSPNGKYILA---ATLDN 654
S D + IWD + +T ++ V + + P +LA D
Sbjct: 266 KQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDG 325
Query: 655 TLKLWDYSRGKCFEDI 702
+K W+ G C +
Sbjct: 326 KIKFWNTHTGACLNSV 341
Score = 49.2 bits (112), Expect = 3e-06
Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 10/170 (5%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT------ISGHKMGISDV 225
T GHT+ V +K+S +G AS D ++ IW ++T H + +
Sbjct: 247 TYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRAL 306
Query: 226 AWSSDSRLIVSAS---DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
AW +++ D +K W +G CL +++ S + L+ S F
Sbjct: 307 AWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGFT 366
Query: 397 ES-VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
++ + +W + + L H+ V + + +G + S++ D R+W+
Sbjct: 367 QNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWN 416
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Frame = +1
Query: 76 HTKAVSSVKFSP-NGEWLASSSA--DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
HT AV ++ + P LA+ D IK W + G ++ + + WS R
Sbjct: 299 HTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQ-VCSLLWSQSER 357
Query: 247 LIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
++S+ L +W+ S + L GH++ V +P + S + DE++R+W+V
Sbjct: 358 ELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNV 417
Score = 36.3 bits (80), Expect = 0.020
Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 3/163 (1%)
Frame = +1
Query: 229 WSSDSRLIVSASDDKTLKVWELSSGKC--LKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 402
W S + L ++ D T+ +W+ SSG L T+ V N+ + G +
Sbjct: 134 WGSANVLAIALGD--TVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSE 191
Query: 403 VRIWDVRTGKCLKPLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 579
V++WD + + ++ L H V ++ + D ++ + DG D +
Sbjct: 192 VQLWDCVSNRQVRTLRGGHESRVGSLAW--DNHILTTGGMDGKIVNNDVRIRSSIVETYL 249
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDIYW 708
V +K+S +G + DN + +WD S + W
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQW 292
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 192
P+ + L GHT V + SPNG +AS++ D+ +++W + G+ KT
Sbjct: 376 PSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVF-GEPPKT 424
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 52.8 bits (121), Expect = 2e-07
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 20/183 (10%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 261
+++ ++++S +G+ S+ DKL+KIW A + T+ K +S VA SSD + A
Sbjct: 64 ESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKR-VSAVAISSDDSHVCYA 122
Query: 262 SDDKTLKVWEL---SSGKCLKTLKG------HSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
+ V EL + GK L + KG + + + F+P I+S D +R+
Sbjct: 123 DKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRV- 181
Query: 415 DVRTGKCLKPLP-------AHSDPVSAVHFNRDGSL----IVSSSYDGLCRIWDTASGQC 561
V K L+ HS+ ++ F L ++S S D R+WD SG
Sbjct: 182 TVFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWDITSGSL 241
Query: 562 LKT 570
L T
Sbjct: 242 LDT 244
Score = 44.8 bits (101), Expect = 6e-05
Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Frame = +1
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 384
K I + +S+ +L VSA DDK +K+W S +CL T+ + S++ +
Sbjct: 63 KESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKRVSAVAISSDDSHVCYA 122
Query: 385 GSFDE--SVRIWDVRTGKCLKP------LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
F + + + GK L L + ++++ F+ DG I+S+ D R+
Sbjct: 123 DKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVT 182
Query: 541 -----DTASGQCLKTLIDDDNPXVSFVKFSPNGK----YILAATLDNTLKLWDYSRGKCF 693
+++ + ++ F + Y+++ + D+T++LWD + G
Sbjct: 183 VFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWDITSGSLL 242
Query: 694 E 696
+
Sbjct: 243 D 243
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +1
Query: 448 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGK 627
P + + A+ ++ G L VS+ D L +IW S +CL T+ + VS V S +
Sbjct: 60 PIRKESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKR--VSAVAISSDDS 117
Query: 628 YILAA 642
++ A
Sbjct: 118 HVCYA 122
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +1
Query: 532 RIWDTASGQCLKTLIDD-DNPX----VSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFE 696
RI+D C +L+D+ D P + +++S +GK ++A D +K+W +C
Sbjct: 41 RIFDLIEN-CPVSLVDESDGPIRKESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLN 99
Query: 697 DI 702
+
Sbjct: 100 TV 101
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Frame = +1
Query: 202 HKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 375
H + +AW+ + R ++ SAS DK +KVW++++G C T++ H+ V +N + +
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 376 IVSGSFDESVRIWDVR 423
++SGSFD++V + D R
Sbjct: 324 LLSGSFDQTVVMKDGR 339
Score = 48.0 bits (109), Expect = 6e-06
Identities = 58/237 (24%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Frame = +1
Query: 16 QSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKT 192
+ KS KP KF HT++V + ++ LAS+SADK +K+W G + T
Sbjct: 248 KKKKSKKQKP----KFKEGSHTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKIT 303
Query: 193 ISGHKMGISDVAWSSDS-RLIVSASDDKT--LKVWELSSGKCLKTLKGHSNYVFCCNFNP 363
+ H + VAW+ + +++S S D+T +K S K + +
Sbjct: 304 MEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVMKDGRQPSHSGFKWSVMSDVESLAWDPHC 363
Query: 364 QSNLIVSGSFDESVRIWDVRTGKC-----LKP---LPAHSDP--VSAVHFN-RDGSLIVS 510
+ + +VS D +V+ +D+R + L P + AH+ VS++ +N +L+ +
Sbjct: 364 EHSFVVSLE-DGTVKGFDIRAAQSGSDSDLNPTYTIQAHAQDRGVSSISYNISTPNLLAT 422
Query: 511 SSYDGLCRIWDTASGQ--CLKTLIDDDNPXVSFVKFSPNGKYILA-ATLDNTLKLWD 672
S D ++WD ++ + C+ T + S + F+ + ++LA L +WD
Sbjct: 423 GSMDKSVKLWDLSNNEPSCIATHQPNAGAVFS-ISFAVDNPFLLAIGGSKGELHVWD 478
Score = 45.2 bits (102), Expect = 4e-05
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Frame = +1
Query: 52 TLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKMGI-SDV 225
T K T+ HTK V +V ++ E L S S D+ + + DG+ + + SG K + SDV
Sbjct: 299 TCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVM---KDGR-QPSHSGFKWSVMSDV 354
Query: 226 ---AWSSD-SRLIVSASDDKTLKVWELSSGKC--------LKTLKGHSNY--VFCCNFNP 363
AW V + +D T+K +++ + + T++ H+ V ++N
Sbjct: 355 ESLAWDPHCEHSFVVSLEDGTVKGFDIRAAQSGSDSDLNPTYTIQAHAQDRGVSSISYNI 414
Query: 364 QS-NLIVSGSFDESVRIWDVRTGK--CLKPLPAHSDPVSAVHFNRDGS-LIVSSSYDGLC 531
+ NL+ +GS D+SV++WD+ + C+ ++ V ++ F D L+ G
Sbjct: 415 STPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGEL 474
Query: 532 RIWDT 546
+WDT
Sbjct: 475 HVWDT 479
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 51.6 bits (118), Expect = 5e-07
Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 11/211 (5%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 249
GH V S+ + N L + D K++ T GH + + WS +
Sbjct: 193 GHESRVGSLAW--NNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVCGLKWSESGKK 250
Query: 250 IVSASDDKTLKVWELS------SGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSF--DES 402
+ S +D + +W+ S + + L + H+ V + P Q++L+ +G D
Sbjct: 251 LASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGK 310
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY-DGLCRIWDTASGQCLKTLID 579
+ W+ TG CL + S S + + L+ + + +W S + L +
Sbjct: 311 INFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYPSMVKMAEL-N 369
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
V F+ SP+G + +A D TL+LW+
Sbjct: 370 GHTSRVLFMAQSPDGCTVASAAGDETLRLWN 400
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 10/170 (5%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT------ISGHKMGISDV 225
T GHT+ V +K+S +G+ LAS D ++ IW T H + +
Sbjct: 231 TYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRAL 290
Query: 226 AWSSDSRLIVSAS---DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD 396
AW +++ D + W +G CL +++ S + L+ + F
Sbjct: 291 AWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFT 350
Query: 397 ES-VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
++ + +W + + L H+ V + + DG + S++ D R+W+
Sbjct: 351 QNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWN 400
Score = 49.2 bits (112), Expect = 3e-06
Identities = 40/207 (19%), Positives = 82/207 (39%), Gaps = 12/207 (5%)
Frame = +1
Query: 118 EWLASSSADKLIKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 291
E++ + +W A K TI ++ + W+ D + D+ ++VW+
Sbjct: 121 EYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWD 180
Query: 292 LSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-TGKCLKPLPAHSDP 465
S + ++TL+ GH + V +N ++++ +G D + DVR + H++
Sbjct: 181 CVSNRHVRTLRGGHESRVGSLAWN--NHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEE 238
Query: 466 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT-----LIDDDNPXVSFVKFSPNGKY 630
V + ++ G + S D + IWD + T ++ V + + P
Sbjct: 239 VCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQAS 298
Query: 631 ILA---ATLDNTLKLWDYSRGKCFEDI 702
+LA D + W+ G C +
Sbjct: 299 LLATGGGVGDGKINFWNTHTGACLNSV 325
Score = 44.4 bits (100), Expect = 8e-05
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Frame = +1
Query: 76 HTKAVSSVKFSP-NGEWLASSSA--DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
HT AV ++ + P LA+ D I W + G ++ + + WS R
Sbjct: 283 HTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQ-VCSLLWSKSER 341
Query: 247 LIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
++SA L +W+ S + L GH++ V +P + S + DE++R+W+V
Sbjct: 342 ELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 192
P+ L GHT V + SP+G +AS++ D+ +++W + G+ KT
Sbjct: 360 PSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVF-GEPPKT 408
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 51.6 bits (118), Expect = 5e-07
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Frame = +1
Query: 232 SSDSRLIVSASDDKTLKVWELSSG--------KCLKTLKGHSNYVFCCNFNPQSNLIVSG 387
S D R++V+ ++D + VW +S + K+L H+ V C + +I S
Sbjct: 3283 SHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASS 3342
Query: 388 SFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 567
S D +V IWD+ + ++ LP S PV+ V+ N IV+++ + +W + +G CL
Sbjct: 3343 SDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYINDLTGEIVTAA-GSVLAVW-SINGDCLS 3400
Query: 568 TL 573
+
Sbjct: 3401 VV 3402
Score = 41.1 bits (92), Expect = 7e-04
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 8/132 (6%)
Frame = +1
Query: 106 SPNGEWLASSSADKLIKIWG-AYDG-------KFEKTISGHKMGISDVAWSSDSRLIVSA 261
S +G + + + D L+ +W + DG + EK++ H + + S +I S+
Sbjct: 3283 SHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASS 3342
Query: 262 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 441
SDD T+ +W+LSS ++ L S V N + IV+ + + +W + G CL
Sbjct: 3343 SDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYINDLTGEIVTAA-GSVLAVWSI-NGDCLS 3400
Query: 442 PLPAHSDPVSAV 477
+ P +
Sbjct: 3401 VVNTSQLPTDLI 3412
Score = 40.7 bits (91), Expect = 0.001
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Frame = +1
Query: 268 DKTLKVWELSSGKCLKTLKG--HSNYVFCCNFNPQSNLIVSGSFDESVRIWDV------- 420
D+TL+ K L T + N + C + ++V+G+ D V +W V
Sbjct: 3251 DRTLRFMSYDQDKLLSTHENLHEGNQIQCAGVSHDGRIVVTGAEDGLVSVWRVSKDGPRG 3310
Query: 421 -RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXV 597
R + K L AH+ V + ++ +I SSS D IWD +S ++ L + P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVT 3370
Query: 598 SFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
G+ + AA + L +W + G C
Sbjct: 3371 VVYINDLTGEIVTAA--GSVLAVWSIN-GDC 3398
Score = 31.9 bits (69), Expect = 0.43
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
L+ +L HT V ++ S +ASSS D + IW F + + + ++ V +
Sbjct: 3316 LEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYIN 3375
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTL 321
+ IV+A+ L VW + +G CL +
Sbjct: 3376 DLTGEIVTAA-GSVLAVWSI-NGDCLSVV 3402
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 51.6 bits (118), Expect = 5e-07
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 2/144 (1%)
Frame = +1
Query: 250 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG 429
IV+AS D ++ ++ +G + L+ N I SG V+IWD R
Sbjct: 9 IVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTETTIASGDDKGCVKIWDTRQR 68
Query: 430 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD--TASGQCLKTLIDDDNPXVSF 603
C AH D +S + F D +V +S DG + + T+ Q +D+ V
Sbjct: 69 SCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVI 128
Query: 604 VKFSPNGKYILAATLDNTLKLWDY 675
+K NG+ ++ T + TL L+ +
Sbjct: 129 MK---NGRKVICGTQNGTLLLYSW 149
Score = 35.9 bits (79), Expect = 0.026
Identities = 34/184 (18%), Positives = 72/184 (39%), Gaps = 1/184 (0%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 303
+AS +KIW + H+ IS + ++SDS +V S D TL V L +
Sbjct: 51 IASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTS 110
Query: 304 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSA-VH 480
K + + + ++ G+ + ++ ++ K P S
Sbjct: 111 KVQSQSEFSEDELLSVVIMKNGRKVICGTQNGTLLLYSWGFFKDCSDRFVDLAPNSVDAL 170
Query: 481 FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTL 660
D +++ +G+ + + ++ + D P + + S + K++ + D+ L
Sbjct: 171 LKLDEDRLITGCDNGIISLVGILPNRIIQPIGSHDYP-IEDLALSHDKKFLGSTAHDSML 229
Query: 661 KLWD 672
KLW+
Sbjct: 230 KLWN 233
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 51.6 bits (118), Expect = 5e-07
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGK----FEKTISGHKMGISDVAWSS 237
GH A+SS + P L + S D +K+W + F+ ++ +S +A S
Sbjct: 101 GHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSH 160
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV-SGSFDESVRIW 414
LI + ++D +++ +++SG TL GH + V ++ S ++ +G D ++R W
Sbjct: 161 T--LIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Query: 415 DVRTGKCLKPL 447
D+R C + L
Sbjct: 219 DIRRAGCFRVL 229
Score = 48.4 bits (110), Expect = 5e-06
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Frame = +1
Query: 292 LSSGKCLKTL-----KGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLK--PL 447
++ KC+ T+ GH + + P + L ++GSFD +++WD T + + +
Sbjct: 85 IAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKM 144
Query: 448 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGK 627
P + +LI + + D R+ D ASG TL V V++S + +
Sbjct: 145 PGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASGAFSHTL-SGHRDGVMSVEWSTSSE 203
Query: 628 YIL-AATLDNTLKLWDYSRGKCF 693
++L D ++ WD R CF
Sbjct: 204 WVLYTGGCDGAIRFWDIRRAGCF 226
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKMGISDVAWSSD 240
H AV+ +K + +G +L S+ +D I++W G+ FE GI +SD
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQ--LDTSD 368
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
+V KT+K + + SG+ L+GH V C FN + + D + +W
Sbjct: 369 DPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVW 426
Score = 46.8 bits (106), Expect = 1e-05
Identities = 45/216 (20%), Positives = 85/216 (39%), Gaps = 7/216 (3%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 240
F + G + + + +A+ + D +++ G F T+SGH+ G+ V WS+
Sbjct: 142 FKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTS 201
Query: 241 SR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIW 414
S ++ + D ++ W++ C + L + F P GS SV
Sbjct: 202 SEWVLYTGGCDGAIRFWDIRRAGCFRVLDQSQTQL---GFRPPILKRTAVGSKLSSVAKS 258
Query: 415 DVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSS-----YDGLCRIWDTASGQCLKTLID 579
+ LK L + +V + V S + G+ D A+
Sbjct: 259 SLGGQNRLKTLQSKQTGSQSVKGSSSAKASVEKSRQKRIHPGMLSTLDRATAH------- 311
Query: 580 DDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
V+ +K + +G Y+L+A D+ ++LWD G+
Sbjct: 312 --YGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGR 345
Score = 31.1 bits (67), Expect = 0.75
Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Frame = +1
Query: 4 QSAPQSNKSSVAKPNY----TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 171
++A S SSVAK + LK TL SVK S + + S K +I
Sbjct: 245 RTAVGSKLSSVAKSSLGGQNRLK-TLQSKQTGSQSVKGSSSAKASVEKSRQK--RIHPGM 301
Query: 172 DGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK----CLKTLKGHSNY 339
++ + H ++ + ++D ++SA D +++W++ SG+ +T + +N
Sbjct: 302 LSTLDRA-TAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNK 360
Query: 340 VFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY 519
+ + L+ ++V+ + + +G+ L H + V+ FN + + +S
Sbjct: 361 GIQLDTSDDPALVFVPCM-KTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGS 419
Query: 520 DGLCRIWDTASGQCLKTLIDDD 585
D +W + G ++ D+
Sbjct: 420 DRQILVW-SPGGTVEDEMVQDE 440
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 466 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD-NPXVSFVKFSPNGKYILAA 642
+ V FN GSL+ + DG C IWD + K + D+D + ++ V +S G +L +
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 643 TLDNTLKLWDYSRGK 687
D +L LWD S G+
Sbjct: 86 AADKSLTLWDVSTGE 100
Score = 46.8 bits (106), Expect = 1e-05
Identities = 59/221 (26%), Positives = 95/221 (42%), Gaps = 26/221 (11%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KMGISDVAWSS-DSRLIVS 258
+ V F+ G LA+ AD IW K I + I+ V+WS RL+VS
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 259 ASDDKTLKVWELSSG-KCLKTL-----------KGHSNYVFC--CNFNPQSNLIVSGSFD 396
A+D K+L +W++S+G K +T+ G S+ C C + + +IV D
Sbjct: 86 AAD-KSLTLWDVSTGEKIARTILQQTPLQARLNPGLSSPSLCLACPLS-SAPMIVDFDID 143
Query: 397 ESV-------RIWDVRTGKCLKPLPAHSDPVS--AVHFNRDGSLIVSSSYDGLCRIWDTA 549
+ + DV P + P S A FN+ G L+ + G I D
Sbjct: 144 CTTLLPVSVPEMPDVLAPPQRSKCPESNPPFSPAAACFNKCGDLVYIGNSKGEILIVDYK 203
Query: 550 SGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
S + L + V + FS NG+Y+L + D T+++++
Sbjct: 204 SVRVLALVSASGAAPVKNIVFSRNGQYLLTNSHDRTIRIYE 244
Score = 35.9 bits (79), Expect = 0.026
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 103 FSPNGEWLASSSADK---LIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 273
FS +GEW+ SA K I IW G K + G K + D+AW +IVS S
Sbjct: 300 FSGDGEWVVGGSACKGEHKIYIWDRA-GHLVKILEGPKEALIDLAWHPVHPIIVSVSLAG 358
Query: 274 TLKVW 288
+ +W
Sbjct: 359 LVYIW 363
Score = 32.7 bits (71), Expect = 0.25
Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 27/192 (14%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTI-------SGHKMGISDVAWS-- 234
A++SV +S G L S+ADK + +W G K +TI + G+S +
Sbjct: 69 AITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIARTILQQTPLQARLNPGLSSPSLCLA 128
Query: 235 ---SDSRLIVSASDDKT----LKVWEL-------SSGKCLKTLKGHSNYVFCCNFNPQSN 372
S + +IV D T + V E+ KC ++ S C FN +
Sbjct: 129 CPLSSAPMIVDFDIDCTTLLPVSVPEMPDVLAPPQRSKCPESNPPFSPAAAC--FNKCGD 186
Query: 373 LIVSGSFDESVRIWDVRTGKCLKPLPAH-SDPVSAVHFNRDGSLIVSSSYDGLCRIWDT- 546
L+ G+ + I D ++ + L + A + PV + F+R+G ++++S+D RI++
Sbjct: 187 LVYIGNSKGEILIVDYKSVRVLALVSASGAAPVKNIVFSRNGQYLLTNSHDRTIRIYENL 246
Query: 547 -ASGQCLKTLID 579
+ LK+L D
Sbjct: 247 LPAKNVLKSLED 258
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 51.2 bits (117), Expect = 7e-07
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKL-IKIWGAYDGK-----FEKTISGHKMGISDV 225
+L H ++ V + P+G S D+ I +W K K +G +S
Sbjct: 115 SLDAHVGKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLSKDSAGMLHSLSGG 174
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES- 402
AW V+A+ + +++ W+L + K + +++ H+ +V ++NP+ I+ + DES
Sbjct: 175 AWDPHDVNAVAATGESSVQFWDLRTMKKVNSIE-HA-HVRGVDYNPKREHILVTAEDESG 232
Query: 403 VRIWDVRTGKC-LKPLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIW 540
+ +WD+R K ++ LP H+ AV N + LI+S+ D + +W
Sbjct: 233 IHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
Score = 33.1 bits (72), Expect = 0.19
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 10/170 (5%)
Frame = +1
Query: 190 TISGHKMGISDVAWSSDSRLIVSAS-DDKTLKVWELSSGK-----CLKTLKGHSNYVFCC 351
++ H I+ V W R S D++ + +W L K K G + +
Sbjct: 115 SLDAHVGKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLSKDSAGMLHSLSGG 174
Query: 352 NFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLP-AHSDPVSAVHFN--RDGSLIVSSSYD 522
++P V+ + + SV+ WD+RT K + + AH V V +N R+ L+ +
Sbjct: 175 AWDPHDVNAVAATGESSVQFWDLRTMKKVNSIEHAH---VRGVDYNPKREHILVTAEDES 231
Query: 523 GLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPN-GKYILAATLDNTLKLW 669
G+ +WD + + V+ +P IL+A D+ + LW
Sbjct: 232 GI-HVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 50.8 bits (116), Expect = 9e-07
Identities = 32/121 (26%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Frame = +1
Query: 226 AWSSDSRLIVSASDDKTLKVWELSSG-----KCLKTLKGHSNYVFCCNFNPQSNLIVSGS 390
A ++ + ++ + + ++ VW+ + K L +L+GH + C F ++ SGS
Sbjct: 271 AMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTC-FVVGGEVLYSGS 329
Query: 391 FDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKT 570
D+++++WD+ T +C L H V+++ D LI SSS DG ++W + + LK
Sbjct: 330 VDKTIKVWDLNTLQCRMTLKQHIGTVTSL-LCWDKCLI-SSSLDGTIKLWACSENESLKV 387
Query: 571 L 573
+
Sbjct: 388 V 388
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Frame = +1
Query: 112 NGEWLASSSADKLIKIWGAYDG-----KFEKTISGHKMGISDVAWSSDSRLIVSASDDKT 276
NG A +S+ ++ +W A D K+ ++ GH G + ++ S S DKT
Sbjct: 276 NGMLFAGTSSGSIL-VWKATDSESDPFKYLTSLEGHHSG-EVTCFVVGGEVLYSGSVDKT 333
Query: 277 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAH 456
+KVW+L++ +C TLK H V + ++S S D ++++W + LK +
Sbjct: 334 IKVWDLNTLQCRMTLKQHIGTV--TSLLCWDKCLISSSLDGTIKLWACSENESLKVVQTR 391
Query: 457 SDPVSAVH 480
+S VH
Sbjct: 392 KQELS-VH 398
Score = 44.8 bits (101), Expect = 6e-05
Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 6/183 (3%)
Frame = +1
Query: 160 WGAYDG-KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 336
W + G + GHK I +A S + S S D TL +W+ +SG+C++++ +
Sbjct: 171 WSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAE 230
Query: 337 YVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSD-PVSAVH-FNRDGSLIVS 510
+ P L +V+ ++V+ K H + V VH ++ +
Sbjct: 231 AGSLISEGPWVFL----GLPNAVKAFNVQNSK-----DVHLEGVVGQVHAMTAANGMLFA 281
Query: 511 SSYDGLCRIWDTASGQC--LKTLIDDDNPXVSFVK-FSPNGKYILAATLDNTLKLWDYSR 681
+ G +W + K L + V F G+ + + ++D T+K+WD +
Sbjct: 282 GTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVGGEVLYSGSVDKTIKVWDLNT 341
Query: 682 GKC 690
+C
Sbjct: 342 LQC 344
Score = 44.4 bits (100), Expect = 8e-05
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV-AWSSD 240
+L GH + F GE L S S DK IK+W + T+ H ++ + W
Sbjct: 306 SLEGHHSGEVTC-FVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWD-- 362
Query: 241 SRLIVSASDDKTLKVWELSSGKCLKTLKGH----SNYVFCCNFNPQSNLIVSGSFDE-SV 405
+ ++S+S D T+K+W S + LK ++ S + C + ++ I+ S+ +V
Sbjct: 363 -KCLISSSLDGTIKLWACSENESLKVVQTRKQELSVHTLCGMHDAEAKPIMFCSYQNGAV 421
Query: 406 RIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
I+D+ + + + + + + + G L+ S G R+W ASG
Sbjct: 422 GIFDLPSFEERGKMFS-TQTICTLTIG-PGGLLFSGDKSGNLRVWSLASG 469
Score = 43.6 bits (98), Expect = 1e-04
Identities = 48/223 (21%), Positives = 85/223 (38%), Gaps = 8/223 (3%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG--- 213
P + L GH + + + L S S D + IW G+ ++I+
Sbjct: 175 PGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGSL 234
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
IS+ W V +K + + + K + L+G V + ++ +G+
Sbjct: 235 ISEGPW-------VFLGLPNAVKAFNVQNSKDVH-LEGVVGQVHA--MTAANGMLFAGTS 284
Query: 394 DESVRIWDVRTG-----KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
S+ +W K L L H F G ++ S S D ++WD + Q
Sbjct: 285 SGSILVWKATDSESDPFKYLTSLEGHHSG-EVTCFVVGGEVLYSGSVDKTIKVWDLNTLQ 343
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
C TL S + + K +++++LD T+KLW S +
Sbjct: 344 CRMTLKQHIGTVTSLLCWD---KCLISSSLDGTIKLWACSENE 383
Score = 35.1 bits (77), Expect = 0.046
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 349 CNFNPQSNLIVSGSFDESVRIWDVRTGKCL-KPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
CNF N G + + W G + L H + + + + + S S DG
Sbjct: 151 CNFWKDGNC-KKGEKCQFLHSWSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDG 209
Query: 526 LCRIWDTASGQCLKTL 573
IWD SGQC++++
Sbjct: 210 TLLIWDCNSGQCVRSI 225
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +1
Query: 277 LKVWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPA 453
L W G + L+GH N + S+ + S S D ++ IWD +G+C++ +
Sbjct: 168 LHSWSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSINL 227
Query: 454 HSDPVSAV 477
++ S +
Sbjct: 228 QAEAGSLI 235
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 50.8 bits (116), Expect = 9e-07
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Frame = +1
Query: 232 SSDSRLIVSASDDKTLKVWELSSG--------KCLKTLKGHSNYVFCCNFNPQSNLIVSG 387
S D R++V+ ++D + VW +S + K L H+ V C + +I SG
Sbjct: 3339 SHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASG 3398
Query: 388 SFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 564
S D +V IWD+ + ++ LP P+SA++ N IV+++ L +W + +G CL
Sbjct: 3399 SDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAAGTVLA-VW-SINGDCL 3455
Score = 41.5 bits (93), Expect = 5e-04
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 10/151 (6%)
Frame = +1
Query: 268 DKTLKVWELSSGKCLKTLKG--HSNYVFCCNFNPQSNLIVSGSFDESVRIWDV------- 420
D++L+ K L T + SN + C + ++V+G+ D V +W V
Sbjct: 3307 DRSLRFMSYDQDKLLSTHENLHESNQIQCAGVSHDGRIVVTGAEDGLVCVWRVSKDGPRG 3366
Query: 421 -RTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXV 597
R + K L AH+ V+ + ++ +I S S D IWD +S ++ L D P
Sbjct: 3367 SRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPIS 3426
Query: 598 SFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
+ G+ + AA L +W + G C
Sbjct: 3427 AIYINDLTGEIVTAA--GTVLAVWSIN-GDC 3454
Score = 37.1 bits (82), Expect = 0.011
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Frame = +1
Query: 106 SPNGEWLASSSADKLIKIWG-AYDG-------KFEKTISGHKMGISDVAWSSDSRLIVSA 261
S +G + + + D L+ +W + DG + EK + H ++ + S +I S
Sbjct: 3339 SHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASG 3398
Query: 262 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 438
SDD T+ +W+LSS ++ L + N + IV+ + + +W + G CL
Sbjct: 3399 SDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAA-GTVLAVWSI-NGDCL 3455
Score = 35.5 bits (78), Expect = 0.035
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 8/157 (5%)
Frame = +1
Query: 55 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 234
L+ L HT V+ ++ S +AS S D + IW F + + + IS + +
Sbjct: 3372 LEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYIN 3431
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCL---KTLKGHSNYVFCCNFNPQSNLI-----VSGS 390
+ IV+A+ L VW + +G CL T + S+ V + S+ + V+G
Sbjct: 3432 DLTGEIVTAA-GTVLAVWSI-NGDCLAVANTSQLPSDSVLSVTGSTSSDWLETSWYVTGH 3489
Query: 391 FDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSL 501
+V++W R C P+ A S S+ NR G L
Sbjct: 3490 QSGAVKVW--RMIHCTDPVSAESKTSSS---NRTGGL 3521
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 375
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 376 IVSGSFDESVRI--WDVRTGKCLKPL--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
GS ++V I ++ + L H V++V ++ + L+ ++S DG CR++
Sbjct: 114 FAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFS 173
Query: 544 T 546
T
Sbjct: 174 T 174
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 375
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 376 IVSGSFDESVRI--WDVRTGKCLKPL--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
GS ++V I ++ + L H V++V ++ + L+ ++S DG CR++
Sbjct: 114 FAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFS 173
Query: 544 T 546
T
Sbjct: 174 T 174
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 375
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 376 IVSGSFDESVRI--WDVRTGKCLKPL--PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
GS ++V I ++ + L H V++V ++ + L+ ++S DG CR++
Sbjct: 114 FAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFS 173
Query: 544 T 546
T
Sbjct: 174 T 174
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and activator
of transcription interacting protein 1 (GI:15929722) {Mus
musculus}; similar to hypothetical protein GB:AAD43147
GI:5430747 from (Arabidopsis thaliana); contains Pfam
PF00400: WD domain, G-beta repeat (11 copies, 2 weak)
Length = 840
Score = 50.0 bits (114), Expect = 2e-06
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASS----SADKL-IKIWGAYDGKFEKTISGHKMGISDVAW 231
L GH + S+ G +ASS SA I +W K + H + ++ + +
Sbjct: 596 LYGHGNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEF 655
Query: 232 SSDSRLIVSASDDKTLKVWELS-------SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 390
S D L++S S D+ V+ + S K + ++ H ++ C++NP + + S
Sbjct: 656 SYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSS 715
Query: 391 FDESVRIWDVRTGKCLKP---LPAHSDPVSAV 477
D++V+IW V +K LP V+AV
Sbjct: 716 RDKTVKIWSVENDARIKQILVLPPFGSSVTAV 747
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Frame = +1
Query: 319 LKGHSNYVFCCNFNPQSNLIVSGSFDES-----VRIWDVRTGKCLKPLPAHSDPVSAVHF 483
L GH N +F + + NL+ S +S + +W+V T K + L +HS V+ + F
Sbjct: 596 LYGHGNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLEF 655
Query: 484 NRDGSLIVSSSYD---GLCRIWDTASGQC---LKTLIDDDNPXVSFVKFSPNGKYILAAT 645
+ D +L++S S D + I T +G+ L ++ + ++P G ++
Sbjct: 656 SYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQFATSS 715
Query: 646 LDNTLKLW 669
D T+K+W
Sbjct: 716 RDKTVKIW 723
Score = 35.9 bits (79), Expect = 0.026
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Frame = +1
Query: 283 VWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-------TGKCLK 441
+WE+ + K + L+ HS V F+ L++S S D ++ ++ + K +
Sbjct: 631 LWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMA 690
Query: 442 PLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 576
+ AH + A +N G +SS D +IW + +K ++
Sbjct: 691 KVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQIL 735
Score = 35.1 bits (77), Expect = 0.046
Identities = 63/271 (23%), Positives = 108/271 (39%), Gaps = 42/271 (15%)
Frame = +1
Query: 22 NKSSVAKPNYTLKFT----LAGHTKAVSSVKFS---------PNGEWLASSSADKLIKIW 162
NK + T KFT L GHT + S+ FS PN L SSS DK+I+IW
Sbjct: 200 NKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIW 259
Query: 163 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 342
+ + I+ +A + + VS + + V + L GH ++V
Sbjct: 260 KLV---LVGDVGSWRREIT-LASYIEGPVFVSGTFTYQISVESV--------LIGHEDWV 307
Query: 343 FCCNFNP-------------QSNLIVSGSFDESVRIW--DVRTG-----KCLKPLPAHSD 462
+ + P Q I+S S D+++ IW + +TG C+ L +
Sbjct: 308 YSVEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCAL 367
Query: 463 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ------CLKTLIDDDNPXVSFVKFSPNG 624
H++ + I++ Y G +W S ++ + V+ V ++ G
Sbjct: 368 GFYGGHWSPNSLSILAHGYGGAFHLWRNVSSSKESENWQMQKVPSGHFAAVTDVTWARTG 427
Query: 625 KYILAATLDNTLKL---WDYSRGKCFEDIYW 708
+Y+L+ + D T ++ W G ED +W
Sbjct: 428 EYLLSVSQDQTTRVFSAWKNDEGNEAEDEHW 458
Score = 34.3 bits (75), Expect = 0.080
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 34/197 (17%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL------ 375
+++V+W + +VS + V+ + + L TL GH V C ++ P S
Sbjct: 22 VNNVSWGASG--LVSFGAQNAVAVFCPKTAQILTTLPGHKASVNCTHWLPTSKFAFKAKK 79
Query: 376 -----IVSGSFDESVRIWDVRT------GKCLKPLP-AHSDPVSAVH---FNRDGSLIVS 510
++SG D + +W++ T + + LP +H V+ + + ++ S
Sbjct: 80 LDRQYLLSGDSDGIIILWELSTLNNDQQWRHVLQLPLSHKKGVTCITAYMVSETDAMFAS 139
Query: 511 SSYDGLCRIWDTA-----SGQCLKTLIDD---DNPXV---SFVKFSPN-GKYILA-ATLD 651
+S DG+ +WD + S +C +D D + S + N G++ LA LD
Sbjct: 140 ASSDGVVNVWDVSFPSQPSEECKVVCLDSICVDTKAIVTLSLAELPQNPGRFALALGGLD 199
Query: 652 NTLKLWDYSRGKCFEDI 702
N +KL+ R F +
Sbjct: 200 NKIKLYSGERTGKFTSV 216
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 48.4 bits (110), Expect = 5e-06
Identities = 31/145 (21%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Frame = +1
Query: 250 IVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR- 423
+++ +D ++ +W++ + K L ++K HS V + + +SG D+ + ++++
Sbjct: 234 VLAGYEDGSILLWDIRNAKIPLTSVKFHSEPVLSLSVASSCDGGISGGADDKIVMYNLNH 293
Query: 424 -TGKCL--KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPX 594
TG C K + VS DG + ++ +D R+++ G L ++
Sbjct: 294 STGSCTIRKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNAL-AILKYHRAT 352
Query: 595 VSFVKFSPNGKYILAATLDNTLKLW 669
+ V +SP+ + + +A+ D T+ LW
Sbjct: 353 CNAVSYSPDCELMASASEDATVALW 377
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +1
Query: 319 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHS--DPVSAVHFN-- 486
L+GH + V +F+P +L+ +GS D +RIWD + + AHS + V AV +
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPW 72
Query: 487 RDGSLIVSSSYDGLCRIWDTASG 555
I+S DG + WD G
Sbjct: 73 LGEDKIISQGRDGTVKCWDIEDG 95
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM--GISDVA---W 231
L GH +V V F P+ L + SAD ++IW + + H G+ VA W
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPW 72
Query: 232 SSDSRLIVSASDDKTLKVWELSSG 303
+ + I+S D T+K W++ G
Sbjct: 73 LGEDK-IISQGRDGTVKCWDIEDG 95
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +1
Query: 193 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS--NYVFCCNFNP- 363
+ GH+ + DV++ L+ + S D L++W+ + + + HS N V +P
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPW 72
Query: 364 -QSNLIVSGSFDESVRIWDVRTG 429
+ I+S D +V+ WD+ G
Sbjct: 73 LGEDKIISQGRDGTVKCWDIEDG 95
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/81 (24%), Positives = 40/81 (49%)
Frame = +1
Query: 52 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 231
T++ + VS +G+ A++ D I+++ G + H+ + V++
Sbjct: 299 TIRKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSY 358
Query: 232 SSDSRLIVSASDDKTLKVWEL 294
S D L+ SAS+D T+ +W+L
Sbjct: 359 SPDCELMASASEDATVALWKL 379
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 171
H ++V +SP+ E +AS+S D + +W Y
Sbjct: 349 HRATCNAVSYSPDCELMASASEDATVALWKLY 380
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 48.4 bits (110), Expect = 5e-06
Identities = 36/153 (23%), Positives = 71/153 (46%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
+S + +S S ++ AS D L+++++ S L + + CC F +S SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCC-FENESTSFTSGS- 73
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
D +R +D+ G + + H D +++ ++ + ++S+ +D + WDT + L
Sbjct: 74 DGFIRRYDLNAGT-VDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRESL-VF 131
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
D V V S N L +D ++ ++D
Sbjct: 132 STDAGGAVGCVTVSGNN---LVVCVDASMHIYD 161
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/118 (22%), Positives = 57/118 (48%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 264
AVS ++FSP L +S D ++++ ++ + + D + ++S S S
Sbjct: 15 AVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNS-QAALLDCCFENESTSFTSGS 73
Query: 265 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 438
D ++ ++L++G + T+ H + ++ + ++S FDE ++ WD R + L
Sbjct: 74 DG-FIRRYDLNAGT-VDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRESL 129
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 48.4 bits (110), Expect = 5e-06
Identities = 36/153 (23%), Positives = 71/153 (46%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
+S + +S S ++ AS D L+++++ S L + + CC F +S SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCC-FENESTSFTSGS- 73
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
D +R +D+ G + + H D +++ ++ + ++S+ +D + WDT + L
Sbjct: 74 DGFIRRYDLNAGT-VDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRESL-VF 131
Query: 574 IDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
D V V S N L +D ++ ++D
Sbjct: 132 STDAGGAVGCVTVSGNN---LVVCVDASMHIYD 161
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/118 (22%), Positives = 57/118 (48%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 264
AVS ++FSP L +S D ++++ ++ + + D + ++S S S
Sbjct: 15 AVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNS-QAALLDCCFENESTSFTSGS 73
Query: 265 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCL 438
D ++ ++L++G + T+ H + ++ + ++S FDE ++ WD R + L
Sbjct: 74 DG-FIRRYDLNAGT-VDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRESL 129
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 48.4 bits (110), Expect = 5e-06
Identities = 36/164 (21%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Frame = +1
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV-- 420
L+ + + + V L+ G+ +++++ H + V C S ++ +GS+D +V +WD+
Sbjct: 1018 LVSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDILR 1077
Query: 421 -RT---------GKCLKP-----------LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 537
RT + L+ L H D ++ ++ + D +++S S DG C
Sbjct: 1078 MRTPEKRVRNTHAEVLRKDIVIADAPSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVF 1137
Query: 538 WDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLW 669
G+ +++L VS + S +G+ +L D +L L+
Sbjct: 1138 HTLREGRYIRSLKHPSGSAVSKLAASHHGRIVLYGDDDLSLHLY 1181
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 361 PQSNLIVS-GSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 537
P N +VS G+++ S + + G+ ++ + H D VS V D +++ + SYD +
Sbjct: 1013 PLENFLVSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMV 1072
Query: 538 WD 543
WD
Sbjct: 1073 WD 1074
Score = 37.9 bits (84), Expect = 0.007
Identities = 38/181 (20%), Positives = 86/181 (47%), Gaps = 24/181 (13%)
Frame = +1
Query: 172 DGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL------------SSGKCLK 315
DG+ ++I HK +S VA ++DS ++ + S D T+ VW++ + + L+
Sbjct: 1035 DGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEKRVRNTHAEVLR 1094
Query: 316 T-----------LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHS- 459
L GH + + C + ++++SGS D + +R G+ ++ L S
Sbjct: 1095 KDIVIADAPSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSG 1154
Query: 460 DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILA 639
VS + + G +++ D ++ + +G+ L + + N ++ ++ S G+++++
Sbjct: 1155 SAVSKLAASHHGRIVLYGDDDLSLHLY-SINGKHLAS--SESNGRINCLELSKCGEFLVS 1211
Query: 640 A 642
A
Sbjct: 1212 A 1212
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 47.6 bits (108), Expect = 8e-06
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Frame = +1
Query: 163 GAYDGKFEKTISGHKMGI---SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 333
G D +F + + GI S +A +SD +I D ++K+ K L+T GH
Sbjct: 2609 GTGDWQFPQAQAFASSGIRSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHC 2668
Query: 334 NYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
V C +P +N +V+GS D +V +W +
Sbjct: 2669 APVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
Score = 45.6 bits (103), Expect = 3e-05
Identities = 33/154 (21%), Positives = 65/154 (42%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
T GH V+ + SP+ +L + S D + +W + +T S S+ +
Sbjct: 2663 TAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSRTSVSEPSTGSGAPSSTSN 2722
Query: 244 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 423
+ + +K K L ++ L+GH + CC + ++VS S V + +R
Sbjct: 2723 TNLANTLANKGKKC-RLEGP--IQVLRGHRRELVCCCVSSDQGVVVSSSESSDVLLHSIR 2779
Query: 424 TGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
G+ ++ L ++ + DG ++ SS +G
Sbjct: 2780 KGRLIRRLVGVK--ADSLCISSDGVIMAWSSSEG 2811
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 261
++ S + + +GE + AD IK+ + K +T GH ++ +A S D+ +V+
Sbjct: 2627 RSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTG 2686
Query: 262 SDDKTLKVWEL 294
S D T+ +W +
Sbjct: 2687 SRDSTVLLWRI 2697
Score = 30.7 bits (66), Expect = 0.99
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +1
Query: 469 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATL 648
S + DG +I D ++ + + L+T P V+ + SP+ +++ +
Sbjct: 2630 SVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAP-VTCLALSPDNNFLVTGSR 2688
Query: 649 DNTLKLW 669
D+T+ LW
Sbjct: 2689 DSTVLLW 2695
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/86 (24%), Positives = 46/86 (53%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 264
A++S+ FS +G +LA+ D ++I+ K + + + AWS D + +++
Sbjct: 305 AINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGG 364
Query: 265 DDKTLKVWELSSGKCLKTLKGHSNYV 342
+D ++VW + K + +GH+++V
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWV 390
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/91 (23%), Positives = 48/91 (52%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
I+ +A+S+D + + D L++++ S+ K + +K + + CC ++ +++G
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGE 365
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSAVHFN 486
D+ V++W + K + H+ VS V F+
Sbjct: 366 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFD 396
Score = 37.9 bits (84), Expect = 0.007
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
Frame = +1
Query: 103 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVA----WSSDSR-------- 246
+S +G++L + D L+++W D K GH +S VA WSS +
Sbjct: 353 WSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSEGSGENVM 412
Query: 247 -LIVSASDDKTLKVWELSSGKCLKTLK----GHSNYVFCCNFNPQSNLIVSGSFDESVRI 411
S D L +W+L + + L+ G Y N++ G+ + +
Sbjct: 413 YRFGSVGQDTQLLLWDLEMDEIVVPLRRPPGGSPTYSTGSQSAHWDNIVPMGTLQPAPCM 472
Query: 412 WDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 540
DV + H++P+S + F ++ ++++ +G +IW
Sbjct: 473 RDVPKLSPVVAHRVHTEPLSGLIFTQES--LITACREGHLKIW 513
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = +1
Query: 466 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAAT 645
++++ F+ DG+ + + DG RI+D ++ Q L + + +S +GKY+L
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDFST-QKLVCGVKSYYGALLCCAWSMDGKYLLTGG 364
Query: 646 LDNTLKLW 669
D+ +++W
Sbjct: 365 EDDLVQVW 372
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 46.4 bits (105), Expect = 2e-05
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 27/184 (14%)
Frame = +1
Query: 202 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVF--------CCNF 357
H+ ++D+A SSD VSASDD T+KVW+ S K K + S + C
Sbjct: 1080 HRSAVNDIATSSDHSFFVSASDDSTVKVWD--SRKLEKDISFRSRLTYHLEGSRGMCTTM 1137
Query: 358 NPQSNLIVSGSFDESVRIWDV-----RTGKCLKPLPAHSD----------PVSAVHFNRD 492
S +V G+ D + ++ + G ++ D VS +++ D
Sbjct: 1138 LRNSTQVVVGASDGVIHMFSIDHISRGLGNVVEKYSGIVDIKKKDVKEGALVSLLNYTAD 1197
Query: 493 ---GSLIVSSSYDGLCRIWDTASGQCLKTL-IDDDNPXVSFVKFSPNGKYILAATLDNTL 660
G +++ S+ + +WDT S TL + + VS + SP G + ++ + L
Sbjct: 1198 SLSGPMVMYSTQNCGIHLWDTRSDLDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSRGVL 1257
Query: 661 KLWD 672
LWD
Sbjct: 1258 TLWD 1261
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
+ +++P + LA + D I + ++ + TIS K ++ + W D + I +
Sbjct: 27 IKIAEWNPEKDLLAMVTEDSKILLH-RFNWQRLWTISPGKP-VTSLCWRPDGKAIAVGLE 84
Query: 268 DKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSGSFDESVRIWDVRTGKCLK 441
D T+ + ++ +GK L+ LK H V C N+ + QSN SG+F +++ RT +
Sbjct: 85 DGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDGQSNTDESGNFS----VYEDRTSRFFP 140
Query: 442 PLP 450
P P
Sbjct: 141 PAP 143
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/55 (23%), Positives = 27/55 (49%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
K V+S+ + P+G+ +A D I + +GK + + H + + + W D +
Sbjct: 65 KPVTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDGQ 119
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/88 (31%), Positives = 42/88 (47%)
Frame = +1
Query: 247 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
+I S S DKTLKVW LS KCL+++K H + + + S S D V+IW
Sbjct: 186 IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAI--NGLVAGDGRVYSASADGKVKIWGKEK 243
Query: 427 GKCLKPLPAHSDPVSAVHFNRDGSLIVS 510
K ++ + S + + +G VS
Sbjct: 244 RKQIESTSSSSSSLHVLKATLEGRAEVS 271
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/71 (30%), Positives = 43/71 (60%)
Frame = +1
Query: 328 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIV 507
H++ + C + + +I SGS+D+++++W + KCL+ + AH D ++ + DG +
Sbjct: 173 HADSISCLAVH--AGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL-VAGDGR-VY 228
Query: 508 SSSYDGLCRIW 540
S+S DG +IW
Sbjct: 229 SASADGKVKIW 239
Score = 41.1 bits (92), Expect = 7e-04
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 6/216 (2%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 246
L+ H +VSS+ GE+L S+S K I +W D K G G S S+
Sbjct: 57 LSAHVGSVSSLALC--GEFLLSASQGKDIIVWQQPDLKIFAKF-GQGDGSVKALVSVGSK 113
Query: 247 LIVSASDDKTLKVWELS------SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 408
+ +A D ++VW++S + + + TL +Y+ F QSN + + + R
Sbjct: 114 -VFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTTKDYLG--KFMKQSNYVQTRRNHK--R 168
Query: 409 IWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
+W H+D +S + + +I S S+D ++W + +CL+++ D+
Sbjct: 169 LWI-----------EHADSISCLAVH--AGIIYSGSWDKTLKVWRLSDLKCLESIKAHDD 215
Query: 589 PXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFE 696
V + +G+ + +A+ D +K+W + K E
Sbjct: 216 AINGLV--AGDGR-VYSASADGKVKIWGKEKRKQIE 248
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 46.4 bits (105), Expect = 2e-05
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 10/179 (5%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGK-----FEKTISGHKMGISD 222
+L H ++ V + P+G + L S L+ W K K +G + +S
Sbjct: 115 SLDAHVGKINCVLWCPSGNSDKLISMDEQNLV-FWSLDSSKKSAEVLSKESAGMRHSLSG 173
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSGSFDE 399
AW+ V+A+ + +++ W+L + K K +V ++N + +++VS +
Sbjct: 174 GAWNPHDVNSVAATSESSIQFWDLRTMK--KNNSIERAHVRNVDYNLKREHILVSADDES 231
Query: 400 SVRIWDVRTGKC-LKPLPAHSDPVSAVHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKT 570
+ +WD+R K ++ LP H+ AV N + LI+S D +W ++ KT
Sbjct: 232 GIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLWFASASSEHKT 290
Score = 34.3 bits (75), Expect = 0.080
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 9/169 (5%)
Frame = +1
Query: 190 TISGHKMGISDVAW--SSDSRLIVSASDDKTLKVWELSSGK-----CLKTLKGHSNYVFC 348
++ H I+ V W S +S ++S D++ L W L S K K G + +
Sbjct: 115 SLDAHVGKINCVLWCPSGNSDKLISM-DEQNLVFWSLDSSKKSAEVLSKESAGMRHSLSG 173
Query: 349 CNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDG 525
+NP V+ + + S++ WD+RT K K V V +N + ++VS+ +
Sbjct: 174 GAWNPHDVNSVAATSESSIQFWDLRTMK--KNNSIERAHVRNVDYNLKREHILVSADDES 231
Query: 526 LCRIWDTASGQCLKTLIDDDNPXVSFVKFSPN-GKYILAATLDNTLKLW 669
+WD + + V+ +P + IL+ D+ + LW
Sbjct: 232 GIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 46.0 bits (104), Expect = 2e-05
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 30/194 (15%)
Frame = +1
Query: 49 YTLKFTLAGHTKAVSSVKFSPN--GEWLASSSADKLIKIWGAY-DGKFEKTI--SGHKMG 213
+T H +V+S+ ++P+ G LA ++D I ++ A DG ++ T H +G
Sbjct: 93 WTQAHVFTDHKVSVNSIAWAPHELGLSLACGASDGNISVFSARADGGWDTTKIDQAHPVG 152
Query: 214 ISDVAWSSDSR--------------LIVSASDDKTLKVWELSSGK----CLKTLKGHSNY 339
++ V+W+ + + S D T+KVW+ S+G C L H+++
Sbjct: 153 VTSVSWAPATEPGALVSSGMIDPVYKLASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDW 212
Query: 340 V----FCCNFNPQSNLIVSGSFDESVRIWDV-RTGKCLK--PLPAHSDPVSAVHFNRDGS 498
V + N + I SGS D V IW + + G+ + L PV V ++ G+
Sbjct: 213 VRDVAWAPNLGLPKSTIASGSEDGKVIIWTIGKEGEQWEGTVLKDFKTPVWRVSWSLTGN 272
Query: 499 LIVSSSYDGLCRIW 540
L+ S + +W
Sbjct: 273 LLAVSDGNNNVTVW 286
Score = 35.1 bits (77), Expect = 0.046
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTISGHKMGISDVAWSSD- 240
GH+ + V G+ +A++S+D IKI G + + T++GH+ + VAW+
Sbjct: 9 GHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPK 68
Query: 241 -SRLIVSASDDKTLKVWE 291
L+ S S D + +W+
Sbjct: 69 FGSLLASCSYDGQIILWK 86
Score = 34.3 bits (75), Expect = 0.080
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = +1
Query: 184 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS---GKCLKTLKGHSNYVFCCN 354
+K +GH I DV + + +AS D T+K+ +S+ + L TL GH V+
Sbjct: 4 QKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVA 63
Query: 355 F-NPQ-SNLIVSGSFDESVRIW 414
+ +P+ +L+ S S+D + +W
Sbjct: 64 WAHPKFGSLLASCSYDGQIILW 85
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +1
Query: 325 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG---KCLKPLPAHSDPVSAVHFNRD- 492
GHS+ + + + + S D +++I V + L L H PV V +
Sbjct: 9 GHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPK 68
Query: 493 -GSLIVSSSYDGLCRIW 540
GSL+ S SYDG +W
Sbjct: 69 FGSLLASCSYDGQIILW 85
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 45.6 bits (103), Expect = 3e-05
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Frame = +1
Query: 256 SASDDKTLKVWE--LSSGKCLKTLK--GHSNYVFCC-NFNPQSNLIVS-GSFDESVRIWD 417
S SDD T++VW+ + + ++ G CC F+P V+ G D ++D
Sbjct: 39 SGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGYVYD 98
Query: 418 VRTGKCLKP---LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
+R K + P L H+ VS V F DG +V++ DG ++W G+ ++T N
Sbjct: 99 IR--KLVDPALTLQGHTKTVSYVRF-LDGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVN 155
Query: 589 PXVSFVKFS--PNGKYILAATLDNTLKLWDYSRGK 687
+FV S NG + +N + ++D GK
Sbjct: 156 NR-NFVGLSVWRNGALFGCGSENNRVFVYDRRWGK 189
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 64 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 204
TL GHTK VS V+F G + ++ D +K+W DG+ +T GH
Sbjct: 108 TLQGHTKTVSYVRFLDGGT-VVTAGTDGCLKLWSVEDGRVIRTYEGH 153
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +1
Query: 85 AVSSVKFSPNG-EWLASSSADK---LIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
AV V+F P+G +A AD+ + I D T+ GH +S V + D +
Sbjct: 71 AVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPAL--TLQGHTKTVSYVRFL-DGGTV 127
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN--LIVSGSFDESVRIWDVRT 426
V+A D LK+W + G+ ++T +GH N + N L GS + V ++D R
Sbjct: 128 VTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRW 187
Query: 427 GK 432
GK
Sbjct: 188 GK 189
Score = 32.7 bits (71), Expect = 0.25
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
Frame = +1
Query: 367 SNLIVSGSFDESVRIWDVR-----TGKCLKPLPAHSDPVSAVHFNRDGSLIVS-SSYDGL 528
S + SGS D ++++WD R + ++P V V F+ G V+ D
Sbjct: 34 STVGASGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRK 93
Query: 529 CRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
++D + VS+V+F G + A T D LKLW G+
Sbjct: 94 GYVYDIRKLVDPALTLQGHTKTVSYVRFLDGGTVVTAGT-DGCLKLWSVEDGR 145
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/63 (39%), Positives = 35/63 (55%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 252
GHT AV+S+ +GEW+AS S D +++W G+ K + I VAW+ SRL
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK-VWQFDEAIMCVAWNPLSRLP 479
Query: 253 VSA 261
V A
Sbjct: 480 VLA 482
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1
Query: 307 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 441
C KGH+ V + + I SGS D SVR+W+V TG+CLK
Sbjct: 415 CYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK 459
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 199 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 378
GH ++ ++ S I S S D ++++WE+ +G+CLK + + C +NP S L
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQ-FDEAIMCVAWNPLSRLP 479
Query: 379 V 381
V
Sbjct: 480 V 480
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 433 CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 567
C H+ V+++ + G I S S DG R+W+ +G+CLK
Sbjct: 415 CYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK 459
Score = 35.5 bits (78), Expect = 0.035
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 13/141 (9%)
Frame = +1
Query: 31 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD--GKFEKTISGH 204
++ KP K G + +SS+ P G+ L S + + W D K KT+ H
Sbjct: 613 NLLKPGEATKKLETG-LREISSMAIHPGGDNLIVGSKEGKM-CWFDMDLSSKPYKTLKNH 670
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVW------ELSSGKC---LKTLKGHSNY--VFCC 351
I++VA L S S+D T V+ +L+ L+ L+GHS+ V C
Sbjct: 671 PKDITNVAVHRSYPLFASCSEDSTAYVFHGMVYNDLNQNPLIVPLEILRGHSSKGGVLDC 730
Query: 352 NFNPQSNLIVSGSFDESVRIW 414
F+P+ + + D ++++
Sbjct: 731 KFHPRQPWLFTAGADSIIKLY 751
Score = 27.5 bits (58), Expect = 9.2
Identities = 7/34 (20%), Positives = 21/34 (61%)
Frame = +1
Query: 595 VSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFE 696
V+ + +G++I + + D ++++W+ G+C +
Sbjct: 426 VTSISTDSSGEWIASGSTDGSVRMWEVETGRCLK 459
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 44.8 bits (101), Expect = 6e-05
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Frame = +1
Query: 319 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPLP-------AHSDPVSA 474
L H V FN SNL+ SG+ D + IWD+ P A +S
Sbjct: 118 LSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISF 177
Query: 475 VHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPN-GKYILAATL 648
+ +NR ++ S+SY+G IWD + + D S ++++PN I+ A+
Sbjct: 178 ISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASD 237
Query: 649 DN---TLKLWD 672
D+ TLKLWD
Sbjct: 238 DDSSPTLKLWD 248
Score = 41.1 bits (92), Expect = 7e-04
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 8/163 (4%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSD--SRLIVSASDDK--TLKVW 288
LAS+S + IW K + S + W+ + ++++V++ DD TLK+W
Sbjct: 188 LASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDSSPTLKLW 247
Query: 289 ELSSGKC-LKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSD 462
++ + ++ GH V + P S+ +++ + D WD T + + LPA ++
Sbjct: 248 DMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNN 307
Query: 463 PVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
VH + + +I +SS+DG I++ C + ++++N
Sbjct: 308 WNFDVHWYPKIPGVISASSFDGKIGIYNIEG--CSRYGVEENN 348
Score = 31.5 bits (68), Expect = 0.57
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Frame = +1
Query: 193 ISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSN----YVFC 348
+S HK + + +++ S L+ S +DD + +W+L S LKG + +
Sbjct: 118 LSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISF 177
Query: 349 CNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPV----SAVHFNRD--GSLIV 507
++N + ++ S S++ + IWD+R KP+ +D V S + +N + ++V
Sbjct: 178 ISWNRKVQQILASTSYNGTTVIWDLRK---QKPIINFADSVRRRCSVLQWNPNVTTQIMV 234
Query: 508 SSSYDG--LCRIWDTASGQCLKTLIDDDNPXVSFVKFSP-NGKYILAATLDNTLKLWD 672
+S D ++WD + V +++ P + Y+L DN WD
Sbjct: 235 ASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 44.8 bits (101), Expect = 6e-05
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Frame = +1
Query: 319 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPLP-------AHSDPVSA 474
L H V FN SNL+ SG+ D + IWD+ P A +S
Sbjct: 118 LSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISF 177
Query: 475 VHFNRD-GSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPN-GKYILAATL 648
+ +NR ++ S+SY+G IWD + + D S ++++PN I+ A+
Sbjct: 178 ISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASD 237
Query: 649 DN---TLKLWD 672
D+ TLKLWD
Sbjct: 238 DDSSPTLKLWD 248
Score = 41.1 bits (92), Expect = 7e-04
Identities = 38/163 (23%), Positives = 78/163 (47%), Gaps = 8/163 (4%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSD--SRLIVSASDDK--TLKVW 288
LAS+S + IW K + S + W+ + ++++V++ DD TLK+W
Sbjct: 188 LASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDSSPTLKLW 247
Query: 289 ELSSGKC-LKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSD 462
++ + ++ GH V + P S+ +++ + D WD T + + LPA ++
Sbjct: 248 DMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNN 307
Query: 463 PVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN 588
VH + + +I +SS+DG I++ C + ++++N
Sbjct: 308 WNFDVHWYPKIPGVISASSFDGKIGIYNIEG--CSRYGVEENN 348
Score = 31.5 bits (68), Expect = 0.57
Identities = 40/178 (22%), Positives = 78/178 (43%), Gaps = 18/178 (10%)
Frame = +1
Query: 193 ISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSN----YVFC 348
+S HK + + +++ S L+ S +DD + +W+L S LKG + +
Sbjct: 118 LSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISF 177
Query: 349 CNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPV----SAVHFNRD--GSLIV 507
++N + ++ S S++ + IWD+R KP+ +D V S + +N + ++V
Sbjct: 178 ISWNRKVQQILASTSYNGTTVIWDLRK---QKPIINFADSVRRRCSVLQWNPNVTTQIMV 234
Query: 508 SSSYDG--LCRIWDTASGQCLKTLIDDDNPXVSFVKFSP-NGKYILAATLDNTLKLWD 672
+S D ++WD + V +++ P + Y+L DN WD
Sbjct: 235 ASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWD 292
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/95 (23%), Positives = 49/95 (51%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 393
I+ +A+S+D + + D L++++ + K + K + + CC+++ I++G
Sbjct: 306 INSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGE 365
Query: 394 DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGS 498
D+ V++W + K + H+ VS V F+ + S
Sbjct: 366 DDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWS 400
Score = 40.3 bits (90), Expect = 0.001
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 16/193 (8%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVA----WSSDSR-- 246
A+ +S +G+++ + D L+++W D K GH +S VA WSS +
Sbjct: 347 ALLCCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSSPNSDG 406
Query: 247 -------LIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNLIVSGSFD 396
S D L +W+L + + L+ G S + N+I G+
Sbjct: 407 SGEHVMYRFGSVGQDTQLLLWDLEMDEIVVPLRRAPGGSPTYSTGSSAHWDNVIPMGTLQ 466
Query: 397 ESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI 576
+ DV + H++P+S + F ++ +V++ +G +IW S +T
Sbjct: 467 PAPCKRDVPKLSPIIAHRVHTEPLSGLMFTQES--VVTACREGHIKIWTRPSESETQTNS 524
Query: 577 DDDNPXVSFVKFS 615
+ NP + + S
Sbjct: 525 SEANPTTALLSTS 537
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +1
Query: 466 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAAT 645
++++ F+ DG+ + + DG RI+D + Q L + +S +GKYIL
Sbjct: 306 INSIAFSNDGAHLATVGRDGYLRIFDFLT-QKLVCGGKSYYGALLCCSWSMDGKYILTGG 364
Query: 646 LDNTLKLW 669
D+ +++W
Sbjct: 365 EDDLVQVW 372
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +1
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 390
GI +A+S + + S D T+K W L G L T+ GH + V + ++ SGS
Sbjct: 588 GIHALAYSEYGH-VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVV--STLVVVNGVLYSGS 644
Query: 391 FDESVRIWDVRTGKCLKPL 447
+D +VR+W + L L
Sbjct: 645 WDGTVRLWSLSDNSLLTVL 663
Score = 41.1 bits (92), Expect = 7e-04
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
+ ++ +S G + + S D IK W DG T+SGHK +S + + ++ S S
Sbjct: 589 IHALAYSEYGH-VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNG--VLYSGSW 645
Query: 268 DKTLKVWELSSGKCLKTL 321
D T+++W LS L L
Sbjct: 646 DGTVRLWSLSDNSLLTVL 663
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/74 (25%), Positives = 38/74 (51%)
Frame = +1
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
+ +GS D +++ W ++ G L + H VS + ++ S S+DG R+W + S
Sbjct: 600 VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVN--GVLYSGSWDGTVRLW-SLSD 656
Query: 556 QCLKTLIDDDNPXV 597
L T++ ++ P +
Sbjct: 657 NSLLTVLGEETPGI 670
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 44.4 bits (100), Expect = 8e-05
Identities = 30/111 (27%), Positives = 57/111 (51%)
Frame = +1
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 390
GIS++ +S++S ++ +S DK++++++ ++G ++ H V C F+ S+ S
Sbjct: 18 GISNLRFSNNSDHLLVSSWDKSVRLYD-ANGDLMRGEFKHGGAVLDCCFHDDSSGF-SVC 75
Query: 391 FDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
D VR D GK L H PV V ++ +++ S+D + WD
Sbjct: 76 ADTKVRRIDFNAGK-EDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +1
Query: 304 KCLKTLKGHSNYVFCCN---FNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSA 474
KC + + + V+ N F+P SG D V IWD K L + ++A
Sbjct: 228 KCHRKSEDGRDIVYPVNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAA 287
Query: 475 VHFNRDGSLI-VSSSY 519
+ F+RDG L+ V+SSY
Sbjct: 288 LSFSRDGGLLAVASSY 303
Score = 31.9 bits (69), Expect = 0.43
Identities = 29/105 (27%), Positives = 49/105 (46%)
Frame = +1
Query: 358 NPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 537
N +L+VS S+D+SVR++D G ++ H V F+ D S S D R
Sbjct: 26 NNSDHLLVS-SWDKSVRLYDAN-GDLMRGEFKHGGAVLDCCFHDDSSGF-SVCADTKVRR 82
Query: 538 WDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
D +G+ + ++ V V++S ++ + D T+K WD
Sbjct: 83 IDFNAGK--EDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 264
V+++ F P AS D + IW + K S + I+ +++S D L+ AS
Sbjct: 243 VNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSRDGGLLAVAS 301
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 44.0 bits (99), Expect = 1e-04
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 20/223 (8%)
Frame = +1
Query: 79 TKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDGKFEKT---ISGHKMGISD---VA 228
T V +++S G+ LA + AD + ++ + + + T +SG ++ S +
Sbjct: 67 TAGVFDIRWSRGGDGGDVALAQADADGCLIVYKIDETESKGTLREVSGKRISSSMCLCLD 126
Query: 229 WSSDSRLIVSASDDKTLKVWELSSG--KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDE 399
W S IV D + V + + ++ KGH ++ +F+ + NL+ +GS D
Sbjct: 127 WDPSSTSIVVGLSDGSASVVSFTDSNLETVQEWKGHDFELWTASFDLNNPNLVYTGSDDC 186
Query: 400 SVRIWDVRTG----KCLKPLPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIWDTAS-GQC 561
WD+R + + H+ V + N D I + SYD R+WDT S +
Sbjct: 187 KFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWDTRSVSRP 246
Query: 562 LKTLIDDDNPXVSFVKFSPN-GKYILAATLDNTLKLWDYSRGK 687
L V +K P+ +LAA + N L S GK
Sbjct: 247 LNETSVSLGGGVWRIKHHPSLSGVVLAACMHNGFALAKVSDGK 289
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 44.0 bits (99), Expect = 1e-04
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Frame = +1
Query: 25 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 204
K++ K + FT GH VSS+ F L S S D + IW A + ++ GH
Sbjct: 247 KNNQVKDSVHCAFT--GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGH 304
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWELS----SGKCLKTLKGHSNYVFCCNFNPQSN 372
+ + + R ++S D+T++++++ L SN+ CC N S+
Sbjct: 305 QSELLSIDALGRER-VLSVGRDRTMQLYKVGIVVPESTRLIYRASESNFECCCFVN--SD 361
Query: 373 LIVSGSFDESVRIWDV 420
+SGS + S+ +W +
Sbjct: 362 EFLSGSDNGSIALWSI 377
Score = 34.7 bits (76), Expect = 0.061
Identities = 44/195 (22%), Positives = 76/195 (38%), Gaps = 34/195 (17%)
Frame = +1
Query: 187 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-------CLKTLKGHS---N 336
+ I H+ ++ VA S D S S D T+ W++SSGK + LK H
Sbjct: 139 RVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSDEYKWPSDEVLKSHGLKFQ 198
Query: 337 YVFCCNFNPQS---------NLIVSGSFDESVRIWDVRTGKCLK---------------P 444
+ N QS + +G D V +WD+RT + ++
Sbjct: 199 ESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCA 258
Query: 445 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNG 624
H VS++ F + + S SYDG IW+ +++ + +S
Sbjct: 259 FTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDAL--GR 316
Query: 625 KYILAATLDNTLKLW 669
+ +L+ D T++L+
Sbjct: 317 ERVLSVGRDRTMQLY 331
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +1
Query: 454 HSDPVSAVHFNRDGSLIVSSSYDGLC-RIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKY 630
+ + +SA+ ++ G + S+SYD IWD + G T I +S +K+SP G Y
Sbjct: 211 NDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGA--GTPIRRGLGGISMLKWSPTGDY 268
Query: 631 ILAATLDNTLKLWD 672
AA D T LW+
Sbjct: 269 FFAARFDGTFCLWE 282
Score = 39.1 bits (87), Expect = 0.003
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 2/138 (1%)
Frame = +1
Query: 61 FTLAGHTKAVSSVKFSPNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKMGISDVAWSS 237
F + + +S++ +SP G +LAS+S D IW G G GIS + WS
Sbjct: 206 FLRCQNDEQISALSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRG-LGGISMLKWSP 264
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLK-TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
+A D T +WE ++ +L S V ++P+ I+ SF +S +
Sbjct: 265 TGDYFFAARFDGTFCLWETNTWTSEPWSLSSGSGSVTGAIWDPEGRFILI-SFSKSSTLG 323
Query: 415 DVRTGKCLKPLPAHSDPV 468
V L AH PV
Sbjct: 324 SVHFSSKPPSLDAHLLPV 341
Score = 35.9 bits (79), Expect = 0.026
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +1
Query: 352 NFNPQSNLIVSGSFDES-VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGL 528
+++P + S S+D S IWDV G P+ +S + ++ G ++ +DG
Sbjct: 219 SWSPCGRYLASASYDSSSFTIWDVSQGAGT-PIRRGLGGISMLKWSPTGDYFFAARFDGT 277
Query: 529 CRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYIL 636
+W+T + + + V+ + P G++IL
Sbjct: 278 FCLWETNTWTSEPWSLSSGSGSVTGAIWDPEGRFIL 313
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 43.6 bits (98), Expect = 1e-04
Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Frame = +1
Query: 37 AKPNYTLKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMG 213
+KP++ LK T + +SS+ ++ + LAS+S + IW D EK I+ K
Sbjct: 149 SKPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIW---DVNNEKIITDLKTT 205
Query: 214 I--SDVAWSSD--SRLIVSASDDKT--LKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSN 372
+ S + W D ++++V++ +D + +K+ ++ + ++T GH V + P +
Sbjct: 206 VRCSVLQWDPDHFNQILVASDEDSSPNVKLLDIRYLQSPVRTFVGHQRGVIAMEWCPSDS 265
Query: 373 L-IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVH-FNRDGSLIVSSSYDGLCRIWD 543
L +++ D W+ +TGK + LP + VH + + +I +SS DG I++
Sbjct: 266 LYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYPKMPGVISASSVDGKIGIYN 324
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 187 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 363
+T GH+ G+ + W SDS +++ D W +GK + L N+ F ++ P
Sbjct: 246 RTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYP 305
Query: 364 Q-SNLIVSGSFDESVRIWDV 420
+ +I + S D + I+++
Sbjct: 306 KMPGVISASSVDGKIGIYNL 325
Score = 35.1 bits (77), Expect = 0.046
Identities = 39/184 (21%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Frame = +1
Query: 187 KTISGHKMGISDVAWSSDS-RLIVSASDDKTLKVWELSS-GKCLKTLKGHSNY----VFC 348
+ +S HK + + ++ S + S +DD T+ +W+L++ K LKG +Y +
Sbjct: 109 RDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYMQSEISS 168
Query: 349 CNFNPQ-SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRD--GSLIVSSSY 519
++N +++ S S + + IWDV K + L + S + ++ D ++V+S
Sbjct: 169 LSWNKGFQHVLASTSHNGTTVIWDVNNEKIITDLKT-TVRCSVLQWDPDHFNQILVASDE 227
Query: 520 DGL--CRIWDTASGQC-LKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
D ++ D Q ++T + ++ + Y+L DN W+ GK
Sbjct: 228 DSSPNVKLLDIRYLQSPVRTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKI 287
Query: 691 FEDI 702
++
Sbjct: 288 VAEL 291
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Frame = +1
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDE 399
++++ D ++ + ++D TL+V+E S K L K H++ V F+ +VS
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKSLTFSESGKFLVSLGAP- 205
Query: 400 SVRIWDVRTGKCLKPLPAHSDPVSA-VHFNRDGS------LIVSSSYDGLCRIWDTASGQ 558
R+WDV + L D + A F+ D S + ++ G WDT S +
Sbjct: 206 LCRVWDVNASAAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWR 265
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSR 681
+ + N +S S +GK + TL+ + + D ++
Sbjct: 266 RRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLIIDSTK 306
Score = 34.7 bits (76), Expect = 0.061
Identities = 18/69 (26%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +1
Query: 472 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPXVSFVKFSPNGKYILAAT 645
++ FN+DG+++ + + DG R+++ S +KTL+++ + V + FS +GK++++
Sbjct: 147 SLSFNQDGTVLATGAEDGTLRVFEWPS---MKTLLNESKTHASVKSLTFSESGKFLVSLG 203
Query: 646 LDNTLKLWD 672
++WD
Sbjct: 204 AP-LCRVWD 211
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Frame = +1
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGHSNYVFCCNFNPQSNLIVSGSFDE 399
++++ D ++ + ++D TL+V+E S K L K H++ V F+ +VS
Sbjct: 148 LSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS-VKSLTFSESGKFLVSLGAP- 205
Query: 400 SVRIWDVRTGKCLKPLPAHSDPVSA-VHFNRDGS------LIVSSSYDGLCRIWDTASGQ 558
R+WDV + L D + A F+ D S + ++ G WDT S +
Sbjct: 206 LCRVWDVNASAAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWR 265
Query: 559 CLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSR 681
+ + N +S S +GK + TL+ + + D ++
Sbjct: 266 RRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVLIIDSTK 306
Score = 34.7 bits (76), Expect = 0.061
Identities = 18/69 (26%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Frame = +1
Query: 472 AVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD--NPXVSFVKFSPNGKYILAAT 645
++ FN+DG+++ + + DG R+++ S +KTL+++ + V + FS +GK++++
Sbjct: 147 SLSFNQDGTVLATGAEDGTLRVFEWPS---MKTLLNESKTHASVKSLTFSESGKFLVSLG 203
Query: 646 LDNTLKLWD 672
++WD
Sbjct: 204 AP-LCRVWD 211
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 303
+AS S I +W G+ + +++ A S + R + +A+ +KVWE+
Sbjct: 212 IASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVWEIVYQ 271
Query: 304 KC--------LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
K + LKGH + V F+P S I++ S D S+R+W++
Sbjct: 272 KDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNI 318
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Frame = +1
Query: 106 SPNGEWLASSSADKLIKIWGAY---DGKFEKT-----ISGHKMGISDVAWSSDSRLIVSA 261
SPNG +LA+++ +K+W DG ++ + GHK ++ + +S +S I++A
Sbjct: 248 SPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITA 307
Query: 262 SDDKTLKVWELS 297
S D +++VW ++
Sbjct: 308 SKDGSIRVWNIN 319
Score = 37.9 bits (84), Expect = 0.007
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 28/189 (14%)
Frame = +1
Query: 190 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL--SSGKCLKTLK------GH----- 330
T+ GH ++ + +SSD + + +A D ++V++L +S K K L+ GH
Sbjct: 81 TLKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSKSFKFLRINLPAGGHPTAVA 140
Query: 331 -----SNYVFCCNFNPQSNLIVSG---SFDESVRI------WDVRTGKCLKPLPAHSDPV 468
S+ V C+ S+L + G D+ ++ WD + + S
Sbjct: 141 FADDASSIVVACHHMSGSSLYMYGEDKQKDQQGKLPLPSIKWDHHHIHEKRSVLTISG-A 199
Query: 469 SAVHFNRDGSLIVSSSYDGL-CRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAAT 645
+A + DGS++++S +G +W +G+ L +D + SPNG+++ AA
Sbjct: 200 TATYGTADGSVVIASCSEGTDIVLWHGKTGRNLGH-VDTNQLKNHMAAVSPNGRFLAAAA 258
Query: 646 LDNTLKLWD 672
+K+W+
Sbjct: 259 FTADVKVWE 267
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 162
L GH AV+ + FSPN E + ++S D I++W
Sbjct: 285 LKGHKSAVTWLCFSPNSEQIITASKDGSIRVW 316
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW--DTASGQCLKTL 573
L L H D V+ + F+ DG + ++ DG+ R++ D AS + K L
Sbjct: 79 LNTLKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSKSFKFL 126
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/109 (18%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Frame = +1
Query: 367 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW-- 540
S +I S S + +W +TG+ L + + + +G + ++++ ++W
Sbjct: 209 SVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVWEI 268
Query: 541 ----DTASGQCLKTL-IDDDNPXVSFVKFSPNGKYILAATLDNTLKLWD 672
D + + + + + V+++ FSPN + I+ A+ D ++++W+
Sbjct: 269 VYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN 317
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +1
Query: 184 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFN 360
+K + HK ++ V++++D +++S SDD+ + +W+ + L GH N +F F
Sbjct: 48 DKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFM 107
Query: 361 PQSN--LIVSGSFDESVR 408
P S+ IV+ + D+ VR
Sbjct: 108 PFSDDRTIVTSAADKQVR 125
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 355 FNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 534
F P+ +VSGS + IW + G+ L+ + A V+ + + L+ SS D +
Sbjct: 318 FGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLMCSSGIDTDIK 377
Query: 535 IW 540
IW
Sbjct: 378 IW 379
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 313 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 426
K L H V +FN ++++SGS D V +WD +T
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQT 86
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 439 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
K L H V+ V FN DG +++S S D +WD
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWD 83
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +1
Query: 103 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 282
F P E++ S S I IW DG+ + + + ++ + L+ S+ D +K
Sbjct: 318 FGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLMCSSGIDTDIK 377
Query: 283 VW 288
+W
Sbjct: 378 IW 379
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 42.3 bits (95), Expect = 3e-04
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Frame = +1
Query: 67 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAW--SS 237
L GH V++V+F+ G+ L S S D+ I +W G + + SGH + + +
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 238 DSRLIVSASDDKTLKVWE-LSSGKC-LKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVR 408
D R I+++ D +++ + L +GK K L H V+ P N+ S D V+
Sbjct: 111 DDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPNVFYSCGEDGFVQ 170
Query: 409 IWDVRT 426
+D+R+
Sbjct: 171 HFDIRS 176
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +1
Query: 319 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPA-HSDPVSAVHF--NR 489
L GH V FN +++VSGS D + +W+ +G P+ H + V F
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 490 DGSLIVSSSYDGLCRI 537
D I++S DG R+
Sbjct: 111 DDRTIITSGADGQVRL 126
Score = 34.7 bits (76), Expect = 0.061
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +1
Query: 73 GHTKA--VSSVKF-SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 243
GH A V V F PN E++ S S I IW GK + + G + ++ +
Sbjct: 316 GHRNAQTVKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHI 375
Query: 244 RLIVSASDDKTLKVWELSSGKCL 312
L+ S +K++K+W S L
Sbjct: 376 PLLASCGIEKSVKLWTPMSNDVL 398
Score = 31.9 bits (69), Expect = 0.43
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 445 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSP-- 618
L H V+AV FN G ++VS S D +W+ SG + V KF P
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 619 NGKYILAATLDNTLKL 666
+ + I+ + D ++L
Sbjct: 111 DDRTIITSGADGQVRL 126
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/70 (21%), Positives = 28/70 (40%)
Frame = +1
Query: 355 FNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 534
F P + SGS + IW + GK ++ + V+ + + L+ S + +
Sbjct: 329 FGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHIPLLASCGIEKSVK 388
Query: 535 IWDTASGQCL 564
+W S L
Sbjct: 389 LWTPMSNDVL 398
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/110 (20%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Frame = +1
Query: 112 NGE-WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKV 285
NG ++A+ +I++ K++ GH ++++ +L+++AS D+++++
Sbjct: 96 NGNPYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRL 155
Query: 286 WELSSGKCLKTLK---GHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVR 423
W + +G C+ GH V +F+P S D +++IW ++
Sbjct: 156 WNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSMK 205
Score = 41.1 bits (92), Expect = 7e-04
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Frame = +1
Query: 277 LKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCL---KP 444
++V +++S K+L GH + V P + L+++ S DESVR+W+V TG C+
Sbjct: 110 IRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAG 169
Query: 445 LPAHSDPVSAVHFN-RDGSLIVSSSYDGLCRIW 540
H V +V F+ D S D +IW
Sbjct: 170 AGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIW 202
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 4/102 (3%)
Frame = +1
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTAS 552
+ +G +R+ DV + K L H D V+ + L++++S D R+W+ +
Sbjct: 101 VAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVET 160
Query: 553 GQCLKTL--IDDDNPXVSFVKFSPNGKYILAAT-LDNTLKLW 669
G C+ V V F P+ Y A+ +D T+K+W
Sbjct: 161 GICILIFAGAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIW 202
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 42.3 bits (95), Expect = 3e-04
Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 11/167 (6%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKMGISDVAWSSDSRLI 252
H KAV+ + P+G+ + D+ + GK GH+ + S + +
Sbjct: 129 HKKAVNDLAIHPSGKLALAVYRDEFFAMLNLVRGKRSFCCRLGHEASLVKFDPSGERFYM 188
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGK 432
V ++ + V + K L L+ S C +S + +G D ++ WD +GK
Sbjct: 189 VVSNK---VGVHQSEDAKLLLELENPSRKRILCATPGESGTLFTGGEDRAITAWDTNSGK 245
Query: 433 CLKPL-PAHSDPVSAV----HFNRDGS-----LIVSSSYDGLCRIWD 543
+ AH + + + DGS LI S+S DG+ R+WD
Sbjct: 246 LAYSIEDAHPARIKGIVVLTRNDSDGSLEDPYLIGSASSDGIIRVWD 292
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 41.9 bits (94), Expect = 4e-04
Identities = 34/164 (20%), Positives = 74/164 (45%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 261
+ V V F N ++ A++ K I+G DG E + ++ + + + L+ S
Sbjct: 159 ETVRDVAFLHNDQFFAAAQK-KYAYIYGR-DGT-ELHCLKERGPVARLRFLKNHFLLASV 215
Query: 262 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK 441
+ L +++ G + +++ NP ++++ G +V +W + L
Sbjct: 216 NMSGQLHYQDVTHGGMVASIRTGKGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTSQAPLV 275
Query: 442 PLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
+ H PVS+V F+ +G L+ +S + +IWD + ++T+
Sbjct: 276 QMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTI 319
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +1
Query: 76 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 249
H VSSV F PNG +A+S ++ IKIW KFE+ + H +++S L
Sbjct: 280 HPGPVSSVAFHPNGHLMATSGKERKIKIWDL--RKFEEVQTIHSFHAKTLSFSQKGLL 335
Score = 30.7 bits (66), Expect = 0.99
Identities = 24/110 (21%), Positives = 42/110 (38%)
Frame = +1
Query: 373 LIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
L+ S + + DV G + + + N S++ G +W S
Sbjct: 211 LLASVNMSGQLHYQDVTHGGMVASIRTGKGRTDVMEVNPYNSVVGLGHSGGTVTMWKPTS 270
Query: 553 GQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKCFEDI 702
L + P VS V F PNG + + + +K+WD + FE++
Sbjct: 271 QAPLVQMQCHPGP-VSSVAFHPNGHLMATSGKERKIKIWDLRK---FEEV 316
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 247 LIVSASDDKTLKVWELSS--GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDV 420
L+ S D +++VW ++ L +K H + V C + + ++SGS D+++R+W +
Sbjct: 865 LLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQI 924
Query: 421 RTGK 432
GK
Sbjct: 925 VKGK 928
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +1
Query: 31 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 186
+V K TL + + H V+ S GE + S SADK I++W GK E
Sbjct: 879 NVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLE 930
Score = 35.1 bits (77), Expect = 0.046
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYD--GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 297
L S +D I++W I HK ++ + S ++S S DKT++VW++
Sbjct: 866 LFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIV 925
Query: 298 SGK--CLKTLK 324
GK C + +K
Sbjct: 926 KGKLECAEVIK 936
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +1
Query: 457 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL---IDDDNPXVSFVKFSPNGK 627
S V+A+ +++ L+ S DG R+W+ + + TL I + V+ S G+
Sbjct: 853 SGAVTALIYHK--GLLFSGFSDGSIRVWNV--NKKIATLLWDIKEHKSTVTCFSLSETGE 908
Query: 628 YILAATLDNTLKLWDYSRGK 687
+L+ + D T+++W +GK
Sbjct: 909 CVLSGSADKTIRVWQIVKGK 928
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +1
Query: 187 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNP 363
K + HK ++ V+++++ +++S SDD+ + +W+ G L GH+N VF F P
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 364 QSN--LIVSGSFDESVR 408
S+ IV+ + D VR
Sbjct: 113 FSDDRTIVTCAADGMVR 129
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +1
Query: 313 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC-LKPLPAHSDPVSAVHFN- 486
K L+ H V +FN + ++++SGS D V +WD + G L H++ V F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 487 -RDGSLIVSSSYDGLCRIWDTASGQCLKT 570
D IV+ + DG+ R G ++T
Sbjct: 113 FSDDRTIVTCAADGMVRRASILEGDKVET 141
Score = 34.7 bits (76), Expect = 0.061
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 267
++ + FS E L S + D+ I ++ G I + S V+ S S S D
Sbjct: 262 ITGLAFSEQSELLVSYN-DEFIYLFTPGMGLGSNPIPSSPISKSPVSKSESSS---SPKD 317
Query: 268 DKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKP 444
+ V + G K +T+KG N+ F P+S +VSGS + IW + G+ ++
Sbjct: 318 ENEHSVSLVYKGHKNCETVKG-VNF-----FGPRSEYVVSGSDCGRIFIWRKKGGELIRV 371
Query: 445 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
+ A V+ + + ++ SS + ++W + + +
Sbjct: 372 MEADRHVVNCIEPHPHIPVLASSGIESDIKVWTSKAAE 409
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = +1
Query: 439 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSP 618
K L H V+ V FN +G +++S S D +WD G + V KF P
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 41.1 bits (92), Expect = 7e-04
Identities = 43/217 (19%), Positives = 90/217 (41%), Gaps = 16/217 (7%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKM-----GISDVAWSSD 240
A+ +++F P GE +A+ + I+ + + + + + +S + W D
Sbjct: 73 AIGAIEFDPTGEIIATGGIARKIRSYRLSSLLESRDDHVTASESYICTPAKLSSLKWRPD 132
Query: 241 --SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY-VFCCNFNPQSNLIV--SGSFDESV 405
R+I S D + +++ + H ++ ++ + ++ SGS D +V
Sbjct: 133 FSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDDGTV 192
Query: 406 RIWDVRTGKCLKPL--PAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLI 576
++WD R G L+ P + +V F+ GS I D ++D ++
Sbjct: 193 QMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVDPLIVL 252
Query: 577 DDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGK 687
D V++ +F + + +T D +LK WD G+
Sbjct: 253 DGHTKTVTYARFMDSHTIVTGST-DGSLKQWDIDNGR 288
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 40.7 bits (91), Expect = 0.001
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 8/134 (5%)
Frame = +1
Query: 151 IKIWG--AYDGKFEKTISGHKMGISDVAWSSDSRL----IVSASDDKTLKVWELSSGKCL 312
+++WG A + F +S G S + + I + ++++L +
Sbjct: 388 LELWGGEAIESGFTSLVSALCSGGSQTKHGDGASVSPSWIAAGFSSGQCRLFDLRENGFI 447
Query: 313 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKP--LPAHSDPVSAVHFN 486
+ + H YV P+S+L+VS S D+++RIWD+R +P + H+D VS F+
Sbjct: 448 SSWRAHDGYVTKL-VAPESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVSG--FS 504
Query: 487 RDGSLIVSSSYDGL 528
G ++S S + +
Sbjct: 505 IWGKDVISISRNNI 518
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Frame = +1
Query: 376 IVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
I +G R++D+R + AH V+ + + L+VSSS D RIWD
Sbjct: 427 IAAGFSSGQCRLFDLRENGFISSWRAHDGYVTKL-VAPESHLLVSSSLDKTLRIWDLRKS 485
Query: 556 QCLKT-LIDDDNPXVSFVKFSPNGKYILAATLDN 654
+ ++ N VS FS GK +++ + +N
Sbjct: 486 WTPQPFVVKGHNDGVS--GFSIWGKDVISISRNN 517
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/62 (20%), Positives = 30/62 (48%)
Frame = +1
Query: 379 VSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
+ F SV+ W++ + C+ AH + V+ + + +S DG +W++ +G+
Sbjct: 253 IDPGFKGSVQKWELASLSCVSSYHAHEEVVNDIGILSSTGKV--ASCDGTIHVWNSQTGK 310
Query: 559 CL 564
+
Sbjct: 311 LI 312
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 106 SPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKMGISDVA-WSSD 240
+P L SSS DK ++IW + + GH G+S + W D
Sbjct: 462 APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVSGFSIWGKD 509
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 40.3 bits (90), Expect = 0.001
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Frame = +1
Query: 355 FNPQSNLIVSGSFDESVRIWDVRT--GKCLKPLPAHS---DPVSAVHFNRDGSLIVSSSY 519
F + I+ S ++ +DV T KPL +++ D V+ V N S + S+
Sbjct: 66 FKTGNENILYASCGNEIKSFDVHTLSATSWKPLESYNYNKDEVNQVVCNGRSSFLASADD 125
Query: 520 DGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKY-ILAATLDNTLKLWDYSRGK 687
G +I D KTL S V+F P + ++ LD+ L LWD+S+G+
Sbjct: 126 SGDVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGR 182
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 1 SQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFS---PNGEWLASSSADKLIKIWGAY 171
S+ + S+ ++V K L +++ GH AVS V FS G +L S DK +KIW +
Sbjct: 249 SKGSSSSSSNNVVK-RVCLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF 307
Score = 34.7 bits (76), Expect = 0.061
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 190 TISGHKMGISDVAWS---SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 336
++ GH +S VA+S R ++S +DKT+K+W+ KCL ++N
Sbjct: 269 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF--KCLDPNNNNNN 318
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +1
Query: 307 CLK-TLKGHSNYVFCCNFN---PQSNLIVSGSFDESVRIWDVRTGKCLKP 444
CL ++ GH++ V C F+ + ++SG D++V+IWD KCL P
Sbjct: 265 CLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD--CFKCLDP 312
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1
Query: 70 AGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTI 195
AGHT SSV+F P W + + D + +W G+ +K I
Sbjct: 145 AGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGRSQKII 187
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = +1
Query: 439 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSP 618
+ L H + +RD IV +S + C W + ++ +ID VS + F
Sbjct: 9 RKLRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEPVSSLCFKT 68
Query: 619 NGKYILAATLDNTLKLWD 672
+ IL A+ N +K +D
Sbjct: 69 GNENILYASCGNEIKSFD 86
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 40.3 bits (90), Expect = 0.001
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 14/204 (6%)
Frame = +1
Query: 103 FSPNGEWLASSSADKLIKIWGAYDGK-FEKTIS-GHKMGISDVAWSSDSRLIVSASDDKT 276
F+ G +L S+S K+ +D K FEK S G ++ L+ DD +
Sbjct: 437 FAVKGSYLFSTSGGKI----AVFDLKNFEKVASFGSPTPMATYFIFIPGDLLAVGLDDGS 492
Query: 277 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR-----TGK--- 432
+ + LSS K + L+GH + C F+ N++VS D + +W + T K
Sbjct: 493 IFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKLTSKNST 552
Query: 433 ---CLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPXVS 600
C + + V+ + F+ + + +DG +++ + C L+ + D +P ++
Sbjct: 553 RKFCNRSNLESTSLVTHIQFD-PYQIELLVVHDGWIGLYEVRTLDCRLQWIPDASDPAIT 611
Query: 601 FVKFSPNGKYILAATLDNTLKLWD 672
+S +G+ I ++K+ D
Sbjct: 612 SATYSSDGEIIYVGFRCGSIKIVD 635
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 556 QCLKTLIDD--DNPXVSFVKFSPNGKYILAATLDNTLKLWDYS 678
QC ++ D ++ + +SP+G YILA D T KLW +S
Sbjct: 360 QCNALVLPDCFSEEKIARLTYSPSGDYILALAEDATHKLWTWS 402
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 7/118 (5%)
Frame = +1
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSG----KCLKTLKGHSNYVFCCNFNPQS---NLIV 381
V WS+D++ I S S D ++ W+ + + L G N C ++ S ++V
Sbjct: 204 VTWSADAQRIFSGSSDGLIRCWDANLCHEVYRITVGLGGLGNGSELCIWSLLSLRYGVLV 263
Query: 382 SGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASG 555
SG SV+ WD + G L+ H V+A+ + + + S+ DG ++ + G
Sbjct: 264 SGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILYKLSGG 321
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 303
L S + ++ W + G + S HK ++ +A S + SA D + +++LS G
Sbjct: 262 LVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILYKLSGG 321
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 394 DESVRIWDVRTGKCL---KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
D VRI+ + L + LP + +V ++ D I S S DGL R WD
Sbjct: 174 DGCVRIYYISESDKLTYYRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCWD 226
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Frame = +1
Query: 304 KCLKTLKGHSNYVFCCN---FNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSA 474
KC + + + V+ N F+P +G D V IWD K L + +SA
Sbjct: 229 KCHRKSEAGRDIVYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISA 288
Query: 475 VHFNRDGSLI-VSSSY 519
+ F+RDG L+ V+SSY
Sbjct: 289 LSFSRDGQLLAVASSY 304
Score = 36.7 bits (81), Expect = 0.015
Identities = 29/111 (26%), Positives = 54/111 (48%)
Frame = +1
Query: 211 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 390
GIS++ +S++S ++ +S DK ++++++S+ LK H V C F+ + G+
Sbjct: 19 GISNLRFSNNSDHLLVSSWDKRVRLYDVSTNS-LKGEFLHGGAVLDCCFHDDFSGFSVGA 77
Query: 391 FDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 543
D VR GK L H V V ++ +++ S+D + WD
Sbjct: 78 -DYKVRRIVFNVGK-EDILGTHDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 264
V+S+ F P A+ D + IW + K S + IS +++S D +L+ AS
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVAS 302
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 355 FNPQSNLIVSGSFDESVRIWDVRT-GKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 531
FNP+ +++ +G+ D ++R++ + L AHS V + F+ G +VS +C
Sbjct: 161 FNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSS-VKCLTFSESGQFLVSLG-GPVC 218
Query: 532 RIWDTASGQCLKTLIDDDNPXVSFVKFS 615
R+WD + + +L + + + +FS
Sbjct: 219 RVWDVNASAAVASLSKEKDEMFASCRFS 246
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 178 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCN 354
K+ K I K IS S+D +L+ + + + + E + + ++ +K H V
Sbjct: 278 KWSKPIK--KNSISAFNVSADGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGLVTALT 335
Query: 355 FNPQSNLIVSGSFDESVRI 411
F+P S +VS SFD R+
Sbjct: 336 FSPDSRGLVSVSFDSRARL 354
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +1
Query: 1 SQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFS---PNGEWLASSSADKLIKIWGAY 171
S+ + S+ ++V K L +++ GH AVS V FS G +L S DK +KIW +
Sbjct: 223 SKGSSSSSSNNVVK-RVCLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF 281
Score = 34.7 bits (76), Expect = 0.061
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +1
Query: 190 TISGHKMGISDVAWS---SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 336
++ GH +S VA+S R ++S +DKT+K+W+ KCL ++N
Sbjct: 243 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF--KCLDPNNNNNN 292
Score = 31.9 bits (69), Expect = 0.43
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +1
Query: 307 CLK-TLKGHSNYVFCCNFN---PQSNLIVSGSFDESVRIWDVRTGKCLKP 444
CL ++ GH++ V C F+ + ++SG D++V+IWD KCL P
Sbjct: 239 CLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD--CFKCLDP 286
Score = 28.3 bits (60), Expect = 5.3
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = +1
Query: 439 KPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSP 618
+ L H + +RD IV +S + C W + ++ +ID VS + F
Sbjct: 9 RKLRGHKSTATCCIASRDRPGIVLTSGEDGCICWFDLRCKDVQFIIDVGTEPVSSLCFKT 68
Query: 619 NGKYILAATLDNTLKLWD 672
+ IL A+ N +K +D
Sbjct: 69 GNENILYASCGNEIKSFD 86
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/93 (23%), Positives = 38/93 (40%)
Frame = +1
Query: 346 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
C F+ + + G D +RI + + P + + F+ D + ++S DG
Sbjct: 127 CMAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDG 186
Query: 526 LCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNG 624
RIW G L TL + + +FS +G
Sbjct: 187 SARIWKAEDGFPLSTLERSGDENIELCRFSKDG 219
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 82 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 177
K++ + FS + E+LA++S D +IW A DG
Sbjct: 165 KSIRDMDFSLDSEFLATTSTDGSARIWKAEDG 196
>At3g52030.1 68416.m05707 F-box family protein / WD-40 repeat family
protein
Length = 454
Score = 38.3 bits (85), Expect = 0.005
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Frame = +1
Query: 235 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGH--SNYVFCCNFNPQSNLIVSGSFDESVR 408
SD++L +S S + V + + + TLK + + FN +NL G+ V
Sbjct: 269 SDNQLFLSGSSLGRVTVSDPLMDQPVATLKSTITAGGIQTICFNQGTNLAFIGTTGGYVS 328
Query: 409 IWDVRTGKCLKPLPAHSDPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD 585
WD+R L + V ++ D S++V+ DG+ R+ D SG+ L +I DD
Sbjct: 329 CWDLRKMDRLWEKRVSPNVVYSIQQLRNDTSVMVAGGIDGVLRMIDQKSGRVLSRVIMDD 388
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +1
Query: 322 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGS 498
+ HS+ V C + L+++G D+ +R+W +++ KC++ + D S + F+ D S
Sbjct: 115 EAHSHRVSQCRM--KKGLLLTGVGDKVMRLWSLKSYKCMEEY-SLPDASSLIDFDFDES 170
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEK-------TISGHKMGISD----VAWSSDSRLIVSASDD 270
L +S D ++IW Y K ++ +I GHK G D V W S + ++ +
Sbjct: 1089 LLVASCDGSVRIWKNYATKGKQKLVTGFSSIQGHKPGARDLNAVVDWQQQSGYLYASGET 1148
Query: 271 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRT 426
T+ +W+L + ++++ S Q + +G D S+R++DVR+
Sbjct: 1149 STVTLWDLEKEQLVRSVPSESECGVTALSASQVHGGQLAAGFADGSLRLYDVRS 1202
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +1
Query: 79 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV- 255
TK VSS+ SP+G+ L ++S +K + D K + +GH + VA++ D + ++
Sbjct: 158 TKTVSSLCVSPDGKILVTASTQ--LKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLS 215
Query: 256 SASDDKTLKVWELSSGK 306
SA ++ + VW+ K
Sbjct: 216 SAVGERYIAVWKTDGAK 232
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 367 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
+ +I G+ D +VRI D+ G +K AH+ PV+ ++F+ +G I S S DG
Sbjct: 69 ARMIALGTHDGTVRILDL-LGNQVKEFRAHTAPVNDINFDTEGEYIGSCSDDG 120
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding protein
2, Homo sapiens ,PIR2:I38909; contains Pfam PF00400: WD
domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 37.1 bits (82), Expect = 0.011
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG-HSNYVFCCNFNPQSN-LIVSG 387
++ V +S +L +++ K + ++++ G L+ H ++ F+ S L +
Sbjct: 543 LTSVHANSTDQLFLASGYSKDVALYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATS 602
Query: 388 SFDESVRIWDVRTGKCLKPLPAHSDPVSA-VHFNRDGSLIVSSSYDGLCRIWDTASGQCL 564
SFD+ V++WD+R A S + V F+ D +++S+ D R T G+
Sbjct: 603 SFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVRQLLTVDGRL- 661
Query: 565 KTLIDDDNPXVSFVKFS----PNGK-YILAATLD-NTLKLWDYSRGKCFEDI 702
L + P VS + ++ NG YI++ + D N +++ G+ D+
Sbjct: 662 -HLNFEIVPRVSSMNYTRSYYMNGNDYIISGSCDENVIRVCCAQTGRRLRDV 712
Score = 27.9 bits (59), Expect = 7.0
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Frame = +1
Query: 70 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----FEKTISGHKMGISDVAWSS 237
A TK V FSP+ +L +S+ D ++ DG+ FE M + + +
Sbjct: 624 ASSTKGNVMVCFSPDDRYLLASAVDNEVRQLLTVDGRLHLNFEIVPRVSSMNYTRSYYMN 683
Query: 238 DSRLIVSAS-DDKTLKVWELSSGKCLK--TLKGHSN 336
+ I+S S D+ ++V +G+ L+ TL+G+ +
Sbjct: 684 GNDYIISGSCDENVIRVCCAQTGRRLRDVTLEGNGS 719
>At5g05150.1 68418.m00547 transport protein-related contains 2 WD-40
repeats (PF00400); similar to transport protein Gsa12p
(GI:18307769) [Pichia pastoris]
Length = 374
Score = 36.7 bits (81), Expect = 0.015
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Frame = +1
Query: 346 CCNFNPQSNLIVS--GSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSY 519
CC + +S +++ G V++ D+R +K + AH ++ + DGSL+ ++S
Sbjct: 166 CCVTHVESKAVLACPGFHPGQVQVHDLRWN-VIKFIKAHDSAIACMTLTLDGSLLATAST 224
Query: 520 DG-LCRIWDTASGQCLKTLIDD-DNPXVSFVKFSPNGKYILAATLDNTLKLW 669
G L RI++ G L+ + + V S N K++ A++ TL ++
Sbjct: 225 KGTLIRIFNAVDGTLLQEFRRGVERAEIYNVAISSNLKWVAASSEKGTLHVF 276
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 36.3 bits (80), Expect = 0.020
Identities = 40/192 (20%), Positives = 78/192 (40%), Gaps = 6/192 (3%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG---HKMGISDVAWSSDSRLIVS 258
++SV F N + L ++ D+ ++ + DGK I I A+ + ++
Sbjct: 247 INSVHFHQNAQLLLTAGLDRRLRFF-QIDGKRNTKIQSIFLEDCPIRKAAFLPNGSQVIV 305
Query: 259 ASDDKTLKVWELSSGKCLKT--LKGHSNYVF-CCNFNPQSNLIVSGSFDESVRIWDVRTG 429
+ K ++L K K L G + SN I + + + +T
Sbjct: 306 SGRRKFFYSFDLEKAKFDKIGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVSTKTK 365
Query: 430 KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVK 609
+ + L + V ++ F+ DG ++SS DG +WD + +CL +D+ + + +
Sbjct: 366 ELIGTLKMNGS-VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEGSTCGTSLC 424
Query: 610 FSPNGKYILAAT 645
S NG + T
Sbjct: 425 SSLNGALFASGT 436
Score = 33.5 bits (73), Expect = 0.14
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Frame = +1
Query: 214 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN-----FNPQ-SNL 375
I+ V + +++L+++A D+ L+ +++ GK + K S ++ C F P S +
Sbjct: 247 INSVHFHQNAQLLLTAGLDRRLRFFQID-GK--RNTKIQSIFLEDCPIRKAAFLPNGSQV 303
Query: 376 IVSG--SFDESVRIWDVRTGKCLKPLPAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWDT 546
IVSG F S + + K + PL + + ++D + I +G + T
Sbjct: 304 IVSGRRKFFYSFDLEKAKFDK-IGPLVGREEKSLEYFEVSQDSNTIAFVGNEGYILLVST 362
Query: 547 ASGQCLKTLIDDDNPXVSFVKFSPNGKYILAATLDNTLKLWDYSRGKC 690
+ + + TL N V + FS +GK++L++ D + +WD KC
Sbjct: 363 KTKELIGTL--KMNGSVRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKC 408
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 35.9 bits (79), Expect = 0.026
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 358 NP-QSNLIVSGSFDESVRIWDVRTGKCLKPLP--AHSDPVSAVHFN-RDGSLIVSSSYDG 525
NP Q L++S D RIWD+R + L AH V++ +F+ G+ I+++ D
Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKILTTCQDN 380
Query: 526 LCRIWDTASG 555
RIWD+ G
Sbjct: 381 RIRIWDSIFG 390
Score = 32.3 bits (70), Expect = 0.32
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +1
Query: 319 LKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVRTGKCLKPL---PAHSDPVSAVHFN 486
++ HS V C F+P ++N+++SG + +WD GK + HS V+ + F+
Sbjct: 167 IRYHSRRVTCLEFHPTKNNILLSGDKKGQIGVWDF--GKVYEKNVYGNIHSVQVNNMRFS 224
Query: 487 -RDGSLIVSSSYDGLCRIWDTASG 555
+ ++ S+S DG D +G
Sbjct: 225 PTNDDMVYSASSDGTIGYTDLETG 248
>At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3
WD-40 repeats (PF00400); similarity to WD-repeat protein
8 (WDR8)(SP:Q9P2S5] [HOMO SAPIENS]
Length = 458
Score = 35.9 bits (79), Expect = 0.026
Identities = 44/211 (20%), Positives = 90/211 (42%), Gaps = 7/211 (3%)
Frame = +1
Query: 88 VSSVKFSPNGEWLASSSADK-LIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 264
+S ++++ + E++ K +I+ W ++ I GIS WS DSR I++ S
Sbjct: 50 ISYIEWALDSEYILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTS 109
Query: 265 D-DKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKC 435
+ L VW L + C+ K S V + + + V + ++ +
Sbjct: 110 EFQLRLTVWSLLNTACVHVQWPKHGSKGVSFNQDGKFAAICTRRDCKDYVNLLSCQSWEI 169
Query: 436 LKPLPAHSDPVSAVHFNRDGSLIV--SSSYDGLCRIWDTASGQCL-KTLIDDDNPXVSFV 606
+ + ++ + ++ D S IV S + I+ + G+CL K + V V
Sbjct: 170 MGSFAVDTLDLADLEWSPDDSSIVVWDSPLEYKVLIY-SPDGRCLFKYQAYECGLGVKTV 228
Query: 607 KFSPNGKYILAATLDNTLKLWDYSRGKCFED 699
+SP G+++ + D L++ ++ K F +
Sbjct: 229 SWSPCGQFLAIGSYDQMLRVLNHLTWKTFAE 259
Score = 27.5 bits (58), Expect = 9.2
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = +1
Query: 346 CCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
CC F+P S + + D + I D + + ++ L + D +S + + D I+ Y
Sbjct: 13 CC-FSPNSRYVAVAN-DYRLVIRDTFSFQVVQ-LFSCLDKISYIEWALDSEYILCGLYKK 69
Query: 526 -LCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYILAAT-LDNTLKLWDYSRGKCFED 699
+ + W + ID+ +S+ ++SP+ ++IL + L +W C
Sbjct: 70 PMIQAWSLTQPEWT-CKIDEGPAGISYARWSPDSRHILTTSEFQLRLTVWSLLNTACVH- 127
Query: 700 IYW 708
+ W
Sbjct: 128 VQW 130
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 35.9 bits (79), Expect = 0.026
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Frame = +1
Query: 73 GHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEK--TISGHKMGISDVAWSSD- 240
GH V V+ G+ +A++S+D IKI G + +G ++ T++GH+ + +VAW+
Sbjct: 9 GHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWAHPK 68
Query: 241 -SRLIVSASDDKTLKVWE 291
++ S S D + +W+
Sbjct: 69 YGSILASCSYDGQVILWK 86
Score = 35.1 bits (77), Expect = 0.046
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFE----KTISGHKMGISDVAWSSDSRL----IVSASDDKTL 279
LAS D +K+W +G ++ + H + DVAW+ + L I S S D +
Sbjct: 179 LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKV 238
Query: 280 KVWEL-SSGKCL--KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
+W + G+ K LK V+ +++ NL+ + +V +W
Sbjct: 239 IIWTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNVTVW 286
Score = 32.7 bits (71), Expect = 0.25
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = +1
Query: 184 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS---GKCLKTLKGHSNYVFCCN 354
+K +GH+ + DV + I +AS D T+K+ +S+ + L TL GH V+
Sbjct: 4 QKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVA 63
Query: 355 F-NPQ-SNLIVSGSFDESVRIW 414
+ +P+ +++ S S+D V +W
Sbjct: 64 WAHPKYGSILASCSYDGQVILW 85
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +1
Query: 325 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTG---KCLKPLPAHSDPVSAVHFNRD- 492
GH + V + I + S D +++I V + L L H PV V +
Sbjct: 9 GHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWAHPK 68
Query: 493 -GSLIVSSSYDGLCRIW 540
GS++ S SYDG +W
Sbjct: 69 YGSILASCSYDGQVILW 85
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 35.5 bits (78), Expect = 0.035
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Frame = +1
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSG----KCLKTLKGHSNYVFCCNFNPQS---NLIV 381
V WS D++ I S S D ++ W+ +S + L G + C ++ S +++V
Sbjct: 204 VTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSLRCSVLV 263
Query: 382 SGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
SG +V+ WD G L+ H V+ + + + S+ DG
Sbjct: 264 SGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADG 311
Score = 35.1 bits (77), Expect = 0.046
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Frame = +1
Query: 94 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI---SDV-AWSSDS---RLI 252
SV +SP+ + + S S+D LI+ W A I+ G+ S++ WS S ++
Sbjct: 203 SVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSLRCSVL 262
Query: 253 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 414
VS T++ W+ G L+ H V P N + S D V ++
Sbjct: 263 VSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILY 316
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Frame = +1
Query: 223 VAWSSDSRLIVSASDDKTLKVWELSSG----KCLKTLKGH-----SNYVFCC--NFNPQS 369
+A SSD + +A +D +L++W +S G C T+ G S+ +CC + S
Sbjct: 19 LANSSDDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRISSLAWCCSPSIGLPS 78
Query: 370 NLIVSGSFDESVRIWDV 420
+ S S D S+ WD+
Sbjct: 79 GRLFSSSIDGSISEWDL 95
Score = 30.3 bits (65), Expect = 1.3
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 6/154 (3%)
Frame = +1
Query: 109 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 288
P+G L SSS D I W +D K + + + I +A + S K +
Sbjct: 77 PSGR-LFSSSIDGSISEWDLFDLKQKIVLESIGISIWQMALAPISGFSSDVEGIKNGYLS 135
Query: 289 ELSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES-VRIWDVRTGKCL---KPLP 450
E S+ + G + F + + I++ + D+ VR++ + + L + LP
Sbjct: 136 EKSNDEEEIGSEEDGSDSDEFHEKSEEEIDRILAAACDDGCVRLYRISNLEKLTYYRSLP 195
Query: 451 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 552
S +V ++ D I S S DGL R WD S
Sbjct: 196 RVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATS 229
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 34.7 bits (76), Expect = 0.061
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 367 SNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAV 477
S++++SGS D ++RIWD+ +G + + H PV +
Sbjct: 549 SHVLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQI 585
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +1
Query: 43 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 162
PN+ + + T A+S++ FSP+GE L + S + L+ W
Sbjct: 1305 PNFLRGASESAVTTAISALSFSPDGEGLVAFSENGLMIRW 1344
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 250 IVSASDDKTLKVWELSSGKCLKTLK 324
++SA D L VW SSG+C K K
Sbjct: 108 LISACTDGVLCVWSRSSGQCRKRRK 132
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 34.3 bits (75), Expect = 0.080
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 13/111 (11%)
Frame = +1
Query: 133 SSADKLIKIWGAYDGKFEK-------TISGHKMGISD----VAWSSDSRLIVSASDDKTL 279
S A I+IW Y K + +I G K G S V W S + + + ++
Sbjct: 1092 SRASFAIRIWKDYATKGRQKLVTGFSSIQGQKPGASGLNAVVDWQQQSGYLYVSGESLSI 1151
Query: 280 KVWELSSGKCLKTLKGHSNYVFCCNFNPQ--SNLIVSGSFDESVRIWDVRT 426
VW+L + +K++ S Q + + +G D SVR++DVRT
Sbjct: 1152 MVWDLDKEQLVKSMPFESGCSVTALSASQVHGSQLAAGFADGSVRLYDVRT 1202
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 34.3 bits (75), Expect = 0.080
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Frame = +1
Query: 151 IKIWGAYDGKFEKTISGHKMGISDVA--WSSDSRLIVSASDDKTLKVWELSS--GKCLKT 318
IKI+ A G +++SGH+ ++ V S D++L++S+S +++W+ SS G +
Sbjct: 1453 IKIFEASSGSMLESVSGHQAPVTLVQPYVSRDTQLLLSSS-SSDVQLWDASSITGGPRHS 1511
Query: 319 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT-GKCLK----PLPAHSDPVSAVHF 483
G F N Q + + + V ++DV+T C K + S+P S VHF
Sbjct: 1512 FDGCKAAKF-SNSGLQFAALSCEASRKDVLLYDVQTCSPCQKLTDTVTSSRSNPYSLVHF 1570
Query: 484 NRDGSLIVSSSYDGLCRIWD 543
+ +LI+ ++G+ +WD
Sbjct: 1571 SPCDTLIL---WNGV--LWD 1585
Score = 30.7 bits (66), Expect = 0.99
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Frame = +1
Query: 277 LKVWELSSGKCLKTLKGHSNYVFCCN-FNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPA 453
+K++E SSG L+++ GH V + + ++ S V++WD + + P
Sbjct: 1453 IKIFEASSGSMLESVSGHQAPVTLVQPYVSRDTQLLLSSSSSDVQLWDASS---ITGGPR 1509
Query: 454 HS-DPVSAVHFNRDGSLIVSSSYDGLCR---IWDTAS-GQCLK---TLIDDDNPXVSFVK 609
HS D A F+ G + S + + ++D + C K T+ + S V
Sbjct: 1510 HSFDGCKAAKFSNSGLQFAALSCEASRKDVLLYDVQTCSPCQKLTDTVTSSRSNPYSLVH 1569
Query: 610 FSPNGKYIL 636
FSP IL
Sbjct: 1570 FSPCDTLIL 1578
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 355 FNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLI 504
F+P N ++ S IWD+RT K L+ +P+ +A+ FN G +I
Sbjct: 1606 FHPSRNEVIINS-----EIWDMRTFKLLRSVPSLDQ--TAITFNSRGDVI 1648
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 34.3 bits (75), Expect = 0.080
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = +1
Query: 193 ISGHKMGISDV-AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 369
I G + I+ A+S D++ ++ + + T+ V+ +++G + +L+ H+ V +P S
Sbjct: 2 IRGGRNNITSAPAFSKDAKKLLLCTAN-TVSVYSVATGLKITSLEDHTAPVTSVIVDPSS 60
Query: 370 NLIVS----GSFDESVRIWDVRTGKCLKPLPAH 456
+ VS S D +RIW+ K LK H
Sbjct: 61 DETVSYCWTSSLDGKIRIWEFSAPKLLKIFDTH 93
Score = 34.3 bits (75), Expect = 0.080
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Frame = +1
Query: 31 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-----GAY-------D 174
+VA + K T HT+ ++ F PN LA+ + IW G + D
Sbjct: 176 NVASEHLMPKETTLHHTELITVFAFHPNQRILAAGDVTGRVLIWKDNGIGEFTSVKTEDD 235
Query: 175 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 306
+ T + H ++ + +SSD L+ S VWEL +GK
Sbjct: 236 TESCTTFNWHSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK 279
Score = 33.1 bits (72), Expect = 0.19
Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 14/145 (9%)
Frame = +1
Query: 274 TLKVWELSSGKCL--KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW---------DV 420
++ +W ++S + +T H+ + F+P ++ +G V IW V
Sbjct: 171 SIHIWNVASEHLMPKETTLHHTELITVFAFHPNQRILAAGDVTGRVLIWKDNGIGEFTSV 230
Query: 421 RTGKCLKPLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNP 591
+T + HS V+ ++F+ DG+L+ S G +W+ +G+ K L+
Sbjct: 231 KTEDDTESCTTFNWHSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK--KQLLPKIGS 288
Query: 592 XVSFVKFSPNGKYILAATLDNTLKL 666
+ + FS + DN + L
Sbjct: 289 PLLYFIFSSDSTLSSVICADNQIHL 313
Score = 31.1 bits (67), Expect = 0.75
Identities = 23/86 (26%), Positives = 36/86 (41%)
Frame = +1
Query: 316 TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDG 495
T HS V NF+ L+ SG +W++ TGK + LP P+ F+ D
Sbjct: 241 TFNWHSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK-KQLLPKIGSPLLYFIFSSDS 299
Query: 496 SLIVSSSYDGLCRIWDTASGQCLKTL 573
+L D + S + L+T+
Sbjct: 300 TLSSVICADNQIHLLKMPSMEILRTI 325
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +1
Query: 49 YTLKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIWGAYDG--KFEKTIS--GH 204
+ LK +A + VS++ F + + LA ++W KFE+ +S H
Sbjct: 376 FLLKEVVAVNPVQVSTLSFVVSNHYNAMHLAIGKGSGSFEVWKCEISTRKFEQIVSTNAH 435
Query: 205 KMGISDVAWSSDSRLIVSASDDKTLKVWEL 294
++ +AWS D R + S S D ++ W L
Sbjct: 436 NQVVTGLAWSYDGRCLYSCSQDNYVRSWIL 465
>At1g03380.1 68414.m00317 expressed protein
Length = 926
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +1
Query: 379 VSGSFDES---VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
VSGS E+ V + D+ +G + AH+ P+SA+ F+ G+L+V++S G
Sbjct: 349 VSGSDAENAGMVAVKDLVSGALVSQFKAHTSPISALCFDPSGTLLVTASVCG 400
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 85 AVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFEK-TISGHKMGISDVAWSSDSRLIVS 258
A+ + +SP+G ++S SAD +I I+ Y+ ++ HK + W S L+VS
Sbjct: 584 ALINQSWSPDGLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEWHSSYPLLVS 643
Query: 259 ASDDKTLKVWEL 294
S D + + +L
Sbjct: 644 ISSDLAIGIHKL 655
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +1
Query: 76 HTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKMGISDVAWSSD 240
HTK + S+ SP N E A+S+ D + W + T+ + +++ + W+ D
Sbjct: 337 HTKRMRSLALSPSNRELFATSALDGAVHFWKLQSDRSTATLFKTVNRVAVDQKKWAED 394
>At4g00800.1 68417.m00110 expressed protein contains 1 WD-40 repeat
(PF00400); 42% similarity to fimbriae-associated protein
Fap1 (gi:3929312) [Streptococcus parasanguinis]
Length = 994
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 463 PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXV 597
PV++V FN+ GSL+++ DG +WD K + + P V
Sbjct: 480 PVTSVCFNQIGSLLLAGYGDGHVTVWDMQRASIAKVITEHTAPVV 524
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 33.1 bits (72), Expect = 0.19
Identities = 37/172 (21%), Positives = 66/172 (38%)
Frame = +1
Query: 58 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 237
K TL HTK +++ F P +A+ + IW + G + + K + +
Sbjct: 206 KMTLH-HTKVINAFAFHPTERVIAAGDVTGRVLIWRGF-GNRKLALGNQKKKVRAMV-DL 262
Query: 238 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 417
D+ + D ++ W HS V NF+ + SG + + +W
Sbjct: 263 DNAGVRGEDDAESCTTWHW-----------HSAEVNVLNFSSDGAYLYSGGREGVLVVWQ 311
Query: 418 VRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 573
+ TGK K LP P+ ++ D +L D + S + L+T+
Sbjct: 312 LDTGK-KKFLPRIGSPLLYFMWSPDPTLSSVVCADNQIHLLKMPSMEILRTI 362
Score = 31.1 bits (67), Expect = 0.75
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +1
Query: 454 HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPXVSFVKFSPNGKYI 633
HS V+ ++F+ DG+ + S +G+ +W +G+ K L +P + F+ +SP+
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK-KKFLPRIGSPLLYFM-WSPDPTLS 339
Query: 634 LAATLDNTLKL 666
DN + L
Sbjct: 340 SVVCADNQIHL 350
Score = 27.5 bits (58), Expect = 9.2
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = +1
Query: 400 SVRIWDVRTGKCLKPLPAHSDPVSA---VHFNRDGSLIV----SSSYDGLCRIWDTASGQ 558
+V ++ TG + L H+ PV+ V + I+ ++S DG R WD + +
Sbjct: 29 TVSVFSAATGLQITSLEGHTAPVTTLIVVPASSPAQKILCYCWTASLDGTIRHWDFSGPE 88
Query: 559 CLKTLIDDDNPXVSFV 606
LKT ID P S V
Sbjct: 89 LLKT-IDAQLPIYSMV 103
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 294
L + S D IW E + H + D+AW ++R+ S S D ++++++L
Sbjct: 148 LGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAW-GEARVFASVSADGSVRIFDL 203
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 294
L + S D IW E + H + D+AW ++R+ S S D ++++++L
Sbjct: 148 LGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAW-GEARVFASVSADGSVRIFDL 203
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +1
Query: 124 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 294
L + S D IW E + H + D+AW ++R+ S S D ++++++L
Sbjct: 148 LGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAW-GEARVFASVSADGSVRIFDL 203
>At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40
repeats (PF00400); low similarity to MEK kinase alpha
(GI:4028547); transcriptional repressor TUP1
(GI:3406654) [Dictyostelium discoideum]; Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (TGF-beta receptor interacting protein 1)
(TRIP-1) (SP:Q38884) [Arabidopsis thaliana]
Length = 442
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 403 VRIWDVRTG--KCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 558
V +WD R G C++ D + ++ D I + +G+ IWD G+
Sbjct: 175 VHVWDRRAGVSPCIELSTDRYDSIKSIQIYVDNQTIFGAGKEGIIHIWDLRGGR 228
>At5g54730.1 68418.m06815 expressed protein
Length = 763
Score = 30.7 bits (66), Expect = 0.99
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 403 VRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG 525
V + D+ + AH P+SA+ F++ G L+V++S G
Sbjct: 329 VIVKDITNKSVITQFKAHKSPISALCFDQSGLLLVTASIQG 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.131 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,365,473
Number of Sequences: 28952
Number of extensions: 321546
Number of successful extensions: 3300
Number of sequences better than 10.0: 277
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2169
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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