Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0327
         (433 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X96588-1|CAA65406.1|  577|Homo sapiens receptor tyrosine kinase ...    29   5.1  
X69970-1|CAA49591.1|  607|Homo sapiens h-ryk protein.                  29   5.1  
S59184-1|AAB26341.1|  606|Homo sapiens RYK protein.                    29   5.1  
AY223817-1|AAP41105.1|  863|Homo sapiens Cohen syndrome 1 protei...    29   5.1  
AY223816-1|AAP41104.1| 1427|Homo sapiens Cohen syndrome 1 protei...    29   5.1  
AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protei...    29   5.1  
AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protei...    29   5.1  
AK091431-1|BAC03664.1|  992|Homo sapiens protein ( Homo sapiens ...    29   5.1  
AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein.    29   5.1  
AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein.    29   5.1  
BC112182-1|AAI12183.1|  419|Homo sapiens nuclear factor of activ...    29   9.0  
BC101741-1|AAI01742.1|  419|Homo sapiens nuclear factor of activ...    29   9.0  
BC080628-1|AAH80628.1|  313|Homo sapiens NFATC2IP protein protein.     29   9.0  
AK074761-1|BAC11189.1|  419|Homo sapiens protein ( Homo sapiens ...    29   9.0  
AF458593-1|AAM49721.1|  419|Homo sapiens hypothetical protein pr...    29   9.0  

>X96588-1|CAA65406.1|  577|Homo sapiens receptor tyrosine kinase
           protein.
          Length = 577

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 34  IFLLRSDFNDKHCVLSFNLFVISEVTLVSFSWY 132
           ++ +R+D    H  LSFNL V SE   + F+W+
Sbjct: 53  LYYVRNDLIS-HYALSFNLLVPSETNFLHFTWH 84


>X69970-1|CAA49591.1|  607|Homo sapiens h-ryk protein.
          Length = 607

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 34  IFLLRSDFNDKHCVLSFNLFVISEVTLVSFSWY 132
           ++ +R+D    H  LSFNL V SE   + F+W+
Sbjct: 83  LYYVRNDLIS-HYALSFNLLVPSETNFLHFTWH 114


>S59184-1|AAB26341.1|  606|Homo sapiens RYK protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +1

Query: 34  IFLLRSDFNDKHCVLSFNLFVISEVTLVSFSWY 132
           ++ +R+D    H  LSFNL V SE   + F+W+
Sbjct: 80  LYYVRNDLIS-HYALSFNLLVPSETNFLHFTWH 111


>AY223817-1|AAP41105.1|  863|Homo sapiens Cohen syndrome 1 protein
           splice variant 3 protein.
          Length = 863

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = -1

Query: 415 NNQIIKNAFIWQTLNTFPQIRVAHRKQSLSHNIPCYQY*QASNRVLFILM*IYKQPYYDN 236
           N+    N   +Q+L   P IR+   K +L H++P Y     + +++ ++  +  QP  DN
Sbjct: 672 NSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMY-----AEQLVHVVSSL-TQP-SDN 724

Query: 235 HANYVYLFTHLK 200
             +Y Y+  +LK
Sbjct: 725 LLHYCYVHCYLK 736


>AY223816-1|AAP41104.1| 1427|Homo sapiens Cohen syndrome 1 protein
           splice variant 2 protein.
          Length = 1427

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = -1

Query: 415 NNQIIKNAFIWQTLNTFPQIRVAHRKQSLSHNIPCYQY*QASNRVLFILM*IYKQPYYDN 236
           N+    N   +Q+L   P IR+   K +L H++P Y     + +++ ++  +  QP  DN
Sbjct: 672 NSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMY-----AEQLVHVVSSL-TQP-SDN 724

Query: 235 HANYVYLFTHLK 200
             +Y Y+  +LK
Sbjct: 725 LLHYCYVHCYLK 736


>AY223815-1|AAP41103.1| 3997|Homo sapiens Cohen syndrome 1 protein
           splice variant 1 protein.
          Length = 3997

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = -1

Query: 415 NNQIIKNAFIWQTLNTFPQIRVAHRKQSLSHNIPCYQY*QASNRVLFILM*IYKQPYYDN 236
           N+    N   +Q+L   P IR+   K +L H++P Y     + +++ ++  +  QP  DN
Sbjct: 672 NSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMY-----AEQLVHVVSSL-TQP-SDN 724

Query: 235 HANYVYLFTHLK 200
             +Y Y+  +LK
Sbjct: 725 LLHYCYVHCYLK 736


>AY223814-1|AAP41102.1| 4022|Homo sapiens Cohen syndrome 1 protein
           protein.
          Length = 4022

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = -1

Query: 415 NNQIIKNAFIWQTLNTFPQIRVAHRKQSLSHNIPCYQY*QASNRVLFILM*IYKQPYYDN 236
           N+    N   +Q+L   P IR+   K +L H++P Y     + +++ ++  +  QP  DN
Sbjct: 672 NSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMY-----AEQLVHVVSSL-TQP-SDN 724

Query: 235 HANYVYLFTHLK 200
             +Y Y+  +LK
Sbjct: 725 LLHYCYVHCYLK 736


>AK091431-1|BAC03664.1|  992|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34112 fis, clone FCBBF3008870. ).
          Length = 992

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = -1

Query: 415 NNQIIKNAFIWQTLNTFPQIRVAHRKQSLSHNIPCYQY*QASNRVLFILM*IYKQPYYDN 236
           N+    N   +Q+L   P IR+   K +L H++P Y     + +++ ++  +  QP  DN
Sbjct: 143 NSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMY-----AEQLVHVVSSL-TQP-SDN 195

Query: 235 HANYVYLFTHLK 200
             +Y Y+  +LK
Sbjct: 196 LLHYCYVHCYLK 207


>AJ608773-1|CAE75585.1| 3997|Homo sapiens VPS13B-2A protein protein.
          Length = 3997

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = -1

Query: 415 NNQIIKNAFIWQTLNTFPQIRVAHRKQSLSHNIPCYQY*QASNRVLFILM*IYKQPYYDN 236
           N+    N   +Q+L   P IR+   K +L H++P Y     + +++ ++  +  QP  DN
Sbjct: 672 NSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMY-----AEQLVHVVSSL-TQP-SDN 724

Query: 235 HANYVYLFTHLK 200
             +Y Y+  +LK
Sbjct: 725 LLHYCYVHCYLK 736


>AJ608772-1|CAE75584.1| 4022|Homo sapiens VPS13B-1A protein protein.
          Length = 4022

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = -1

Query: 415 NNQIIKNAFIWQTLNTFPQIRVAHRKQSLSHNIPCYQY*QASNRVLFILM*IYKQPYYDN 236
           N+    N   +Q+L   P IR+   K +L H++P Y     + +++ ++  +  QP  DN
Sbjct: 672 NSSNFMNTTNFQSLRPLPSIRILVDKINLEHSVPMY-----AEQLVHVVSSL-TQP-SDN 724

Query: 235 HANYVYLFTHLK 200
             +Y Y+  +LK
Sbjct: 725 LLHYCYVHCYLK 736


>BC112182-1|AAI12183.1|  419|Homo sapiens nuclear factor of
           activated T-cells, cytoplasmic, calcineurin-dependent 2
           inter protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -3

Query: 170 PLAIVSDCVKYSKYHEKETKVTSEITNRLKDKTQCLSLKSDRNKKIQ 30
           PL+  S   K S+ H +  K  SE+  RL+D   CLS K  + ++ Q
Sbjct: 199 PLSPPSPRTK-SRTHTRALKKLSEVNKRLQDLRSCLSPKPPQGQEQQ 244


>BC101741-1|AAI01742.1|  419|Homo sapiens nuclear factor of
           activated T-cells, cytoplasmic, calcineurin-dependent 2
           inter protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -3

Query: 170 PLAIVSDCVKYSKYHEKETKVTSEITNRLKDKTQCLSLKSDRNKKIQ 30
           PL+  S   K S+ H +  K  SE+  RL+D   CLS K  + ++ Q
Sbjct: 199 PLSPPSPRTK-SRTHTRALKKLSEVNKRLQDLRSCLSPKPPQGQEQQ 244


>BC080628-1|AAH80628.1|  313|Homo sapiens NFATC2IP protein protein.
          Length = 313

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -3

Query: 170 PLAIVSDCVKYSKYHEKETKVTSEITNRLKDKTQCLSLKSDRNKKIQ 30
           PL+  S   K S+ H +  K  SE+  RL+D   CLS K  + ++ Q
Sbjct: 93  PLSPPSPRTK-SRTHTRALKKLSEVNKRLQDLRSCLSPKPPQGQEQQ 138


>AK074761-1|BAC11189.1|  419|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90280 fis, clone NT2RP1000465,  similar to
           UBIQUITIN-LIKE PROTEIN SMT3. ).
          Length = 419

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -3

Query: 170 PLAIVSDCVKYSKYHEKETKVTSEITNRLKDKTQCLSLKSDRNKKIQ 30
           PL+  S   K S+ H +  K  SE+  RL+D   CLS K  + ++ Q
Sbjct: 199 PLSPPSPRTK-SRTHTRALKKLSEVNKRLQDLRSCLSPKPPQGQEQQ 244


>AF458593-1|AAM49721.1|  419|Homo sapiens hypothetical protein
           protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -3

Query: 170 PLAIVSDCVKYSKYHEKETKVTSEITNRLKDKTQCLSLKSDRNKKIQ 30
           PL+  S   K S+ H +  K  SE+  RL+D   CLS K  + ++ Q
Sbjct: 199 PLSPPSPRTK-SRTHTRALKKLSEVNKRLQDLRSCLSPKPPQGQEQQ 244


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,936,435
Number of Sequences: 237096
Number of extensions: 1043742
Number of successful extensions: 1887
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1887
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)