Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0323
         (357 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   2.0  
AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione S-tran...    23   4.5  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 13   FMSNNYKNIVNFQIDDPKGKFSLNLMNFNLINE*ARNNS 129
            F S   + + N  +DD K  FS N   FNL      +NS
Sbjct: 1595 FESVALRFVYNTSVDDSKLSFSWNGQEFNLFCSTGSSNS 1633


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 125 IRKLSEEVVNRIAAGEIVQRPA 190
           I   S  V  R A GE++QRPA
Sbjct: 197 IYSYSNHVYIRFAVGELLQRPA 218


>AY070257-1|AAL59656.1|  217|Anopheles gambiae glutathione
           S-transferase e8 protein.
          Length = 217

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -1

Query: 285 ICKNFKPPDFTVIMMLVDLASKLFSISSFN 196
           +C  F PP  T+ +      +K+F++  FN
Sbjct: 74  LCDTFAPPGHTLALPDALTRAKVFNMLCFN 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,832
Number of Sequences: 2352
Number of extensions: 5900
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)