Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0323
(357 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068257-1|AAC19117.1| 663|Drosophila melanogaster mutL homolog... 139 1e-33
AE013599-613|AAF59117.1| 664|Drosophila melanogaster CG11482-PA... 139 1e-33
AY069833-1|AAL39978.1| 895|Drosophila melanogaster SD07911p pro... 64 7e-11
AF068271-1|AAC19245.1| 893|Drosophila melanogaster mutL homolog... 64 7e-11
AE013599-2050|AAF58142.1| 899|Drosophila melanogaster CG8169-PA... 64 7e-11
AY058322-1|AAL13551.1| 684|Drosophila melanogaster GH09291p pro... 29 2.3
AJ577475-1|CAE12059.1| 1342|Drosophila melanogaster polo kinase ... 29 2.3
AE013599-3861|AAM68311.1| 1300|Drosophila melanogaster CG4527-PA... 29 2.3
AE013599-3860|AAS64767.1| 1703|Drosophila melanogaster CG4527-PD... 29 2.3
AE013599-3859|AAS64766.1| 1703|Drosophila melanogaster CG4527-PC... 29 2.3
AE013599-3858|AAF47198.2| 1703|Drosophila melanogaster CG4527-PB... 29 2.3
AE013599-3857|AAX52684.1| 1342|Drosophila melanogaster CG4527-PE... 29 2.3
AY069185-1|AAL39330.1| 1385|Drosophila melanogaster GH23617p pro... 27 7.0
AE014296-2853|AAF49385.1| 1385|Drosophila melanogaster CG3764-PA... 27 7.0
>AF068257-1|AAC19117.1| 663|Drosophila melanogaster mutL homolog
protein.
Length = 663
Score = 139 bits (336), Expect = 1e-33
Identities = 66/81 (81%), Positives = 74/81 (91%)
Frame = +2
Query: 113 EPGIIRKLSEEVVNRIAAGEIVQRPANALKELIENSLDAKSTNIIITVKSGGLKFLQIQD 292
+PG+IRKL E VVNRIAAGEI+QRPANALKEL+ENSLDA+ST+I + VK+GGLK LQIQD
Sbjct: 6 QPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQD 65
Query: 293 NGTGIRNEDLGIVCERFTTSK 355
NGTGIR EDL IVCERFTTSK
Sbjct: 66 NGTGIRREDLAIVCERFTTSK 86
>AE013599-613|AAF59117.1| 664|Drosophila melanogaster CG11482-PA
protein.
Length = 664
Score = 139 bits (336), Expect = 1e-33
Identities = 66/81 (81%), Positives = 74/81 (91%)
Frame = +2
Query: 113 EPGIIRKLSEEVVNRIAAGEIVQRPANALKELIENSLDAKSTNIIITVKSGGLKFLQIQD 292
+PG+IRKL E VVNRIAAGEI+QRPANALKEL+ENSLDA+ST+I + VK+GGLK LQIQD
Sbjct: 6 QPGVIRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQD 65
Query: 293 NGTGIRNEDLGIVCERFTTSK 355
NGTGIR EDL IVCERFTTSK
Sbjct: 66 NGTGIRREDLAIVCERFTTSK 86
>AY069833-1|AAL39978.1| 895|Drosophila melanogaster SD07911p
protein.
Length = 895
Score = 63.7 bits (148), Expect = 7e-11
Identities = 29/79 (36%), Positives = 54/79 (68%)
Frame = +2
Query: 119 GIIRKLSEEVVNRIAAGEIVQRPANALKELIENSLDAKSTNIIITVKSGGLKFLQIQDNG 298
G I+ + ++ V++I +G++V A A+KEL+ENS+DA +T + I +K GL+ +++ DNG
Sbjct: 25 GQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNG 84
Query: 299 TGIRNEDLGIVCERFTTSK 355
+G+ +L + ++ TSK
Sbjct: 85 SGVEEMNLEGMTAKYHTSK 103
>AF068271-1|AAC19245.1| 893|Drosophila melanogaster mutL homolog
PMS2 protein.
Length = 893
Score = 63.7 bits (148), Expect = 7e-11
Identities = 29/79 (36%), Positives = 54/79 (68%)
Frame = +2
Query: 119 GIIRKLSEEVVNRIAAGEIVQRPANALKELIENSLDAKSTNIIITVKSGGLKFLQIQDNG 298
G I+ + ++ V++I +G++V A A+KEL+ENS+DA +T + I +K GL+ +++ DNG
Sbjct: 25 GQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNG 84
Query: 299 TGIRNEDLGIVCERFTTSK 355
+G+ +L + ++ TSK
Sbjct: 85 SGVEEMNLEGMTAKYHTSK 103
>AE013599-2050|AAF58142.1| 899|Drosophila melanogaster CG8169-PA
protein.
Length = 899
Score = 63.7 bits (148), Expect = 7e-11
Identities = 29/79 (36%), Positives = 54/79 (68%)
Frame = +2
Query: 119 GIIRKLSEEVVNRIAAGEIVQRPANALKELIENSLDAKSTNIIITVKSGGLKFLQIQDNG 298
G I+ + ++ V++I +G++V A A+KEL+ENS+DA +T + I +K GL+ +++ DNG
Sbjct: 25 GQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQSVEVSDNG 84
Query: 299 TGIRNEDLGIVCERFTTSK 355
+G+ +L + ++ TSK
Sbjct: 85 SGVEEMNLEGMTAKYHTSK 103
>AY058322-1|AAL13551.1| 684|Drosophila melanogaster GH09291p
protein.
Length = 684
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 248 ITVKSGGLKFLQIQDNGTGIRNEDLGIVCERFTTSK 355
+ VK + ++ Q NG GI ED+ I+ RF K
Sbjct: 128 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEK 163
>AJ577475-1|CAE12059.1| 1342|Drosophila melanogaster polo kinase
kinase 1 protein.
Length = 1342
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 248 ITVKSGGLKFLQIQDNGTGIRNEDLGIVCERFTTSK 355
+ VK + ++ Q NG GI ED+ I+ RF K
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEK 779
>AE013599-3861|AAM68311.1| 1300|Drosophila melanogaster CG4527-PA,
isoform A protein.
Length = 1300
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 248 ITVKSGGLKFLQIQDNGTGIRNEDLGIVCERFTTSK 355
+ VK + ++ Q NG GI ED+ I+ RF K
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEK 779
>AE013599-3860|AAS64767.1| 1703|Drosophila melanogaster CG4527-PD,
isoform D protein.
Length = 1703
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 248 ITVKSGGLKFLQIQDNGTGIRNEDLGIVCERFTTSK 355
+ VK + ++ Q NG GI ED+ I+ RF K
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEK 779
>AE013599-3859|AAS64766.1| 1703|Drosophila melanogaster CG4527-PC,
isoform C protein.
Length = 1703
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 248 ITVKSGGLKFLQIQDNGTGIRNEDLGIVCERFTTSK 355
+ VK + ++ Q NG GI ED+ I+ RF K
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEK 779
>AE013599-3858|AAF47198.2| 1703|Drosophila melanogaster CG4527-PB,
isoform B protein.
Length = 1703
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 248 ITVKSGGLKFLQIQDNGTGIRNEDLGIVCERFTTSK 355
+ VK + ++ Q NG GI ED+ I+ RF K
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEK 779
>AE013599-3857|AAX52684.1| 1342|Drosophila melanogaster CG4527-PE,
isoform E protein.
Length = 1342
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 248 ITVKSGGLKFLQIQDNGTGIRNEDLGIVCERFTTSK 355
+ VK + ++ Q NG GI ED+ I+ RF K
Sbjct: 744 VKVKDSSNELVKRQPNGVGIVPEDVNIIVNRFKQEK 779
>AY069185-1|AAL39330.1| 1385|Drosophila melanogaster GH23617p
protein.
Length = 1385
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 188 ANALKELIENSLDAKSTNIIITVKSGGLKFLQIQDNGTGIRN 313
+NAL++++ A S +I T SGG KFL+ + T ++N
Sbjct: 35 SNALQKVMHKDQSATSASISSTSTSGGGKFLK-NEKYTSLQN 75
>AE014296-2853|AAF49385.1| 1385|Drosophila melanogaster CG3764-PA
protein.
Length = 1385
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 188 ANALKELIENSLDAKSTNIIITVKSGGLKFLQIQDNGTGIRN 313
+NAL++++ A S +I T SGG KFL+ + T ++N
Sbjct: 35 SNALQKVMHKDQSATSASISSTSTSGGGKFLK-NEKYTSLQN 75
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,960,222
Number of Sequences: 53049
Number of extensions: 242533
Number of successful extensions: 531
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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