Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0322
         (354 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   3.7  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   8.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.6  

>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 83  TVVHKHYKISRIRGFYIRKVKYTQQNF 163
           TVV   +K+ R+  +Y    K+   NF
Sbjct: 87  TVVIGTFKVHRLEEYYPNPDKFDPDNF 113


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 37  GLYRHNFIENTKE 75
           GLY H+ I  TKE
Sbjct: 301 GLYNHSTIPLTKE 313


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +3

Query: 180  ELFRNSQS*MMSIHFMLIS*TYCTTRIITNLDSDS*IQPDILLTMS 317
            E+F +    M  I F+L++ T     ++  L  +  +Q   L+ +S
Sbjct: 870  EIFGHGLLLMFGISFLLVTQTIFALCVVLQLQENDWLQLGYLIFVS 915


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,835
Number of Sequences: 336
Number of extensions: 1663
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)