Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0322
(354 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1 |Schizosa... 173 7e-45
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 27 0.64
SPCC132.02 |hst2||Sir2 family histone deacetylase Hst2|Schizosac... 27 1.1
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 26 1.5
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 25 2.6
SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces pom... 25 3.4
SPAP8A3.14c |||mitochondrial inner membrane protein |Schizosacch... 25 4.5
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 25 4.5
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 24 6.0
SPBC947.09 |||ThiJ domain protein|Schizosaccharomyces pombe|chr ... 24 6.0
SPCC1672.02c |sap1||switch-activating protein Sap1|Schizosacchar... 24 7.9
>SPBC651.01c |nog1|SPBC725.18c|GTP binding protein Nog1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 173 bits (421), Expect = 7e-45
Identities = 72/116 (62%), Positives = 96/116 (82%)
Frame = +2
Query: 5 FKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDRLSRI 184
FK I +P F+D++LS+TQRKTPTV+ +KISRIRGFY RKVK+TQ ++L I
Sbjct: 6 FKNITPIPDVNTFLDVVLSRTQRKTPTVIRSGFKISRIRGFYGRKVKFTQDTITEKLDSI 65
Query: 185 IQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGD 352
+QEFPKL+D+HPF+ADL+N+LYD+DH K+ L QL+TA+HL++NVA+DY+RLLKYGD
Sbjct: 66 LQEFPKLNDIHPFHADLLNILYDRDHLKIALSQLSTAKHLVENVARDYIRLLKYGD 121
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 27.5 bits (58), Expect = 0.64
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 11 KIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGF 127
KI VV + + + S+ QRK +++ KH I + GF
Sbjct: 1670 KIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVDGF 1708
>SPCC132.02 |hst2||Sir2 family histone deacetylase
Hst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 332
Score = 26.6 bits (56), Expect = 1.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 127 KPTYS*YFIMLVNDCRSFPLCFR*N 53
+PTY+ YFI L++D R C+ N
Sbjct: 95 RPTYTHYFIRLLHDKRLLQKCYTQN 119
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 26.2 bits (55), Expect = 1.5
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = +2
Query: 107 ISRIRGFYIRKVKYTQQNFHDRLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQL 286
+S IR R+ K + LSR I + KLD V PF +M +L D+ + + + L
Sbjct: 437 LSTIRHVNTRESKINALSLVQILSRNICDESKLDTVLPF---VMTLLRDQ-YADVRISAL 492
Query: 287 NTARHLIDNV 316
T L+ NV
Sbjct: 493 ITITRLVSNV 502
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 25.4 bits (53), Expect = 2.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 10 KDCCSPYS*GLYRHNFIEN 66
K SPYS G Y++N IEN
Sbjct: 501 KSSSSPYSRGPYKYNRIEN 519
>SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 25.0 bits (52), Expect = 3.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 92 HKHYKISRIRGFYIRKVKYTQQNFHDRLSRI 184
H+H+K+SR R YI+ N D +++I
Sbjct: 230 HQHWKVSRDRKQYIKNFHNESVNNVDLINKI 260
>SPAP8A3.14c |||mitochondrial inner membrane protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 677
Score = 24.6 bits (51), Expect = 4.5
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +2
Query: 5 FKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIR-KVKYTQQNFHDRLS- 178
FK IA + F+D +S R T + +++ GF +K + F+ LS
Sbjct: 553 FKTIANNKSVDAFLDDCVSFFSRPEMT---QDSQLNASSGFLTNFSLKDSTDRFYKVLSY 609
Query: 179 -RIIQEFPKLDDVHPFYADLMNVL 247
++ + F K+DD + Y+D+ + L
Sbjct: 610 EKVSERFVKIDDSYITYSDIFSPL 633
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 24.6 bits (51), Expect = 4.5
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -3
Query: 154 LGI--FHFSNIKPTYS*YFIMLVNDCRSF 74
LGI FH KPT YF L C F
Sbjct: 1388 LGIARFHLKKFKPTDFDYFFQLAEFCMDF 1416
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 24.2 bits (50), Expect = 6.0
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +2
Query: 17 AVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDRLSRIIQEF 196
AV +DF +L TPT+ HY+ IR YI + F R+S + + F
Sbjct: 150 AVKDAIEDFRRTMLDIHLNNTPTLRLSHYQNPNIRTEYISYFR----RFKKRISALFRVF 205
>SPBC947.09 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 24.2 bits (50), Expect = 6.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 143 KYTQQNFHDRLSRIIQEFPKLDDVHPFYADLMNV 244
KY +N D RI+Q D+V+P D+ V
Sbjct: 95 KYVLENKDDMFWRIVQNSKTADEVNPDKYDIFFV 128
>SPCC1672.02c |sap1||switch-activating protein
Sap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 254
Score = 23.8 bits (49), Expect = 7.9
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +2
Query: 131 IRKVKYTQQNFHDRLSRIIQEFPKLDDV 214
+ KV + ++ HD +++Q K+D+V
Sbjct: 164 VAKVNFLSKHLHDNEEKLMQVNAKMDEV 191
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,517,572
Number of Sequences: 5004
Number of extensions: 30230
Number of successful extensions: 78
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 105935336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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